RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 SPATA3Q8NHX4 192 aa6.2□□□□□ -1.42
HPS4-208ENST00000464362 ESRGQ1W209 222 aa6.2□□□□□ -1.42
HPS4-208ENST00000464362 DCHS2Q6V1P9 2916 aa6.2□□□□□ -1.42
HPS4-208ENST00000464362 A0A096LNT2 108 aa6.19□□□□□ -1.42
HPS4-208ENST00000464362 A6NED7 52 aa6.19□□□□□ -1.42
HPS4-208ENST00000464362 PSPHP1O15172 72 aa6.19□□□□□ -1.42
HPS4-208ENST00000464362 FBN2P35556 2912 aa6.19□□□□□ -1.42
HPS4-208ENST00000464362 A0A087WSZ3 146 aa6.19□□□□□ -1.42
HPS4-208ENST00000464362 LINC00208Q96KT6 92 aa6.17□□□□□ -1.42
HPS4-208ENST00000464362 BAHCC1Q9P281 2608 aa6.17□□□□□ -1.42
HPS4-208ENST00000464362 KIAA0087Q14695 138 aa6.17□□□□□ -1.42
HPS4-208ENST00000464362 CSNK1G2-AS1Q8NCQ2 148 aa6.17□□□□□ -1.42
HPS4-208ENST00000464362 PLAC8L1A1L4L8 177 aa6.16□□□□□ -1.42
HPS4-208ENST00000464362 TMEM254Q8TBM7 123 aa6.16□□□□□ -1.42
HPS4-208ENST00000464362 C7orf33Q8WU49 177 aa6.16□□□□□ -1.42
HPS4-208ENST00000464362 IL17DQ8TAD2 202 aa6.15□□□□□ -1.42
HPS4-208ENST00000464362 C14orf177Q52M58 125 aa6.15□□□□□ -1.42
HPS4-208ENST00000464362 HIVEP1P15822 2718 aa6.15□□□□□ -1.42
HPS4-208ENST00000464362 Q8NAQ8 132 aa6.15□□□□□ -1.43
HPS4-208ENST00000464362 C19orf73Q9NVV2 129 aa6.15□□□□□ -1.43
HPS4-208ENST00000464362 REG3GQ6UW15 175 aa6.14□□□□□ -1.43
HPS4-208ENST00000464362 FAM104AQ969W3 186 aa6.14□□□□□ -1.43
HPS4-208ENST00000464362 LINC01561Q8N1V8 128 aa6.14□□□□□ -1.43
HPS4-208ENST00000464362 C22orf24Q9Y442 160 aa6.14□□□□□ -1.43
HPS4-208ENST00000464362 Q6ZQT0 140 aa6.13□□□□□ -1.43
HPS4-208ENST00000464362 PRYO14603 147 aa6.13□□□□□ -1.43
HPS4-208ENST00000464362 TM2D3Q9BRN9 247 aa6.13□□□□□ -1.43
HPS4-208ENST00000464362 CR1P17927 2039 aa6.13□□□□□ -1.43
HPS4-208ENST00000464362 C2orf48Q96LS8 159 aa6.13□□□□□ -1.43
HPS4-208ENST00000464362 ST20-AS1Q8NBB2 130 aa6.12□□□□□ -1.43
HPS4-208ENST00000464362 LINC00167Q96N53 147 aa6.12□□□□□ -1.43
HPS4-208ENST00000464362 SMIM29Q86T20 159 aa6.11□□□□□ -1.43
HPS4-208ENST00000464362 Q9BRP9 147 aa6.11□□□□□ -1.43
HPS4-208ENST00000464362 SVEP1Q4LDE5 3571 aa6.11□□□□□ -1.43
HPS4-208ENST00000464362 Q6ZRP5 223 aa6.11□□□□□ -1.43
HPS4-208ENST00000464362 PCOTHQ58A44 107 aa6.1□□□□□ -1.43
HPS4-208ENST00000464362 CSMD2Q7Z408 3487 aa6.1□□□□□ -1.43
HPS4-208ENST00000464362 HRNRQ86YZ3 2850 aaPredicted RBP6.1□□□□□ -1.43
HPS4-208ENST00000464362 KRTAP10-3P60369 221 aa6.1□□□□□ -1.43
HPS4-208ENST00000464362 FAM168BA1KXE4 195 aa6.09□□□□□ -1.43
HPS4-208ENST00000464362 CSMD1Q96PZ7 3565 aa6.09□□□□□ -1.43
HPS4-208ENST00000464362 ELOF1P60002 83 aaKnown RBP6.09□□□□□ -1.43
HPS4-208ENST00000464362 STAB2Q8WWQ8 2551 aa6.09□□□□□ -1.44
HPS4-208ENST00000464362 A0A0G2JQZ4 141 aa6.08□□□□□ -1.44
HPS4-208ENST00000464362 A0A1W2PNN7 141 aa6.08□□□□□ -1.44
HPS4-208ENST00000464362 CXCL6P80162 114 aa6.08□□□□□ -1.44
HPS4-208ENST00000464362 C4orf48Q5BLP8 95 aa6.08□□□□□ -1.44
HPS4-208ENST00000464362 LINC01556Q5JQF7 62 aa6.08□□□□□ -1.44
HPS4-208ENST00000464362 VPREB1P12018 145 aa6.08□□□□□ -1.44
HPS4-208ENST00000464362 PRR15LQ9BU68 103 aa6.08□□□□□ -1.44
HPS4-208ENST00000464362 LINC00474Q9P2X8 69 aa6.08□□□□□ -1.44
HPS4-208ENST00000464362 CUBNO60494 3623 aa6.07□□□□□ -1.44
HPS4-208ENST00000464362 IGHV6-1A0A0B4J1U7 121 aa6.07□□□□□ -1.44
HPS4-208ENST00000464362 LY6G6CO95867 125 aa6.07□□□□□ -1.44
HPS4-208ENST00000464362 CASC2Q6XLA1 102 aa6.07□□□□□ -1.44
HPS4-208ENST00000464362 CHTF8P0CG12 524 aa6.06□□□□□ -1.44
HPS4-208ENST00000464362 SERTAD4-AS1Q5TG53 156 aa6.06□□□□□ -1.44
HPS4-208ENST00000464362 NBPF19A0A087WUL8 3843 aa6.06□□□□□ -1.44
HPS4-208ENST00000464362 IGLV6-57P01721 117 aa6.06□□□□□ -1.44
HPS4-208ENST00000464362 CD164Q04900 197 aa6.06□□□□□ -1.44
HPS4-208ENST00000464362 KRTAP24-1Q3LI83 254 aa6.06□□□□□ -1.44
HPS4-208ENST00000464362 KRTAP1-3Q8IUG1 177 aa6.06□□□□□ -1.44
HPS4-208ENST00000464362 RETNLBQ9BQ08 111 aa6.05□□□□□ -1.44
HPS4-208ENST00000464362 CIRBP-AS1Q8TBR5 109 aa6.05□□□□□ -1.44
HPS4-208ENST00000464362 RPL37AP61513 92 aaKnown RBP6.04□□□□□ -1.44
HPS4-208ENST00000464362 HCG22E2RYF7 251 aa6.04□□□□□ -1.44
HPS4-208ENST00000464362 LINC00588Q9Y4M8 146 aa6.04□□□□□ -1.44
HPS4-208ENST00000464362 LOC110117498A0A087WWA1 95 aa6.03□□□□□ -1.44
HPS4-208ENST00000464362 APCP25054 2843 aa6.03□□□□□ -1.44
HPS4-208ENST00000464362 H0Y9P7 68 aa6.03□□□□□ -1.44
HPS4-208ENST00000464362 Q6ZRX8 168 aa6.03□□□□□ -1.44
HPS4-208ENST00000464362 CELSR1Q9NYQ6 3014 aa6.03□□□□□ -1.44
HPS4-208ENST00000464362 PHF5AQ7RTV0 110 aaKnown RBP6.03□□□□□ -1.44
HPS4-208ENST00000464362 LINC00476Q8WZB0 136 aa6.03□□□□□ -1.44
HPS4-208ENST00000464362 Q8NBF4 154 aa6.02□□□□□ -1.45
HPS4-208ENST00000464362 NIPBLQ6KC79 2804 aaeCLIP6.02□□□□□ -1.45
HPS4-208ENST00000464362 PRR34Q9NV39 138 aa6.01□□□□□ -1.45
HPS4-208ENST00000464362 KRTAP1-1Q07627 177 aa6□□□□□ -1.45
HPS4-208ENST00000464362 LINC00528Q8N1L1 170 aa6□□□□□ -1.45
HPS4-208ENST00000464362 C15orf56Q8N910 161 aa6□□□□□ -1.45
HPS4-208ENST00000464362 CASC10Q5T4H9 136 aa5.99□□□□□ -1.45
HPS4-208ENST00000464362 GVQW2A0A096LPI5 108 aaPredicted RBP5.99□□□□□ -1.45
HPS4-208ENST00000464362 LINC00612Q8N6U2 182 aa5.99□□□□□ -1.45
HPS4-208ENST00000464362 MXRA5Q9NR99 2828 aa5.99□□□□□ -1.45
HPS4-208ENST00000464362 BCE1O60756 84 aa5.99□□□□□ -1.45
HPS4-208ENST00000464362 KRTAP10-11P60412 298 aa5.99□□□□□ -1.45
HPS4-208ENST00000464362 ZNF469Q96JG9 3925 aaPredicted RBP5.99□□□□□ -1.45
HPS4-208ENST00000464362 K7EQZ3 153 aa5.99□□□□□ -1.45
HPS4-208ENST00000464362 Q8NDZ9 215 aa5.98□□□□□ -1.45
HPS4-208ENST00000464362 C1orf64Q8NEQ6 169 aa5.98□□□□□ -1.45
HPS4-208ENST00000464362 KMT2BQ9UMN6 2715 aaPredicted RBP5.98□□□□□ -1.45
HPS4-208ENST00000464362 Q8N377 158 aa5.97□□□□□ -1.45
HPS4-208ENST00000464362 H7BZZ5 65 aa5.97□□□□□ -1.45
HPS4-208ENST00000464362 TRBV7-4A0A0J9YYF1 115 aa5.97□□□□□ -1.45
HPS4-208ENST00000464362 H3BNG1 76 aa5.96□□□□□ -1.45
HPS4-208ENST00000464362 EPM2AB3EWF7 344 aa5.96□□□□□ -1.46
HPS4-208ENST00000464362 Q5XG85 94 aa5.96□□□□□ -1.46
HPS4-208ENST00000464362 MOBPQ13875 183 aa5.96□□□□□ -1.46
HPS4-208ENST00000464362 ZNF706Q9Y5V0 76 aaPredicted RBP5.96□□□□□ -1.46
HPS4-208ENST00000464362 MDFIQ99750 246 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms