RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 C6orf48Q9UBA6 75 aa4.74□□□□□ -1.65
UBE4B-204ENST00000462658 SYCNQ0VAF6 134 aa4.73□□□□□ -1.65
UBE4B-204ENST00000462658 Q6ZR54 194 aa4.73□□□□□ -1.65
UBE4B-204ENST00000462658 Q6ZRU5 148 aa4.73□□□□□ -1.65
UBE4B-204ENST00000462658 APOBP04114 4563 aaKnown RBP4.73□□□□□ -1.65
UBE4B-204ENST00000462658 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.72□□□□□ -1.65
UBE4B-204ENST00000462658 LCE6AA0A183 80 aa4.72□□□□□ -1.65
UBE4B-204ENST00000462658 A0A1B0GWB2 263 aa4.72□□□□□ -1.65
UBE4B-204ENST00000462658 K7ERJ3 54 aa4.72□□□□□ -1.65
UBE4B-204ENST00000462658 TAX1BP3O14907 124 aa4.72□□□□□ -1.65
UBE4B-204ENST00000462658 SCGB1A1P11684 91 aa4.72□□□□□ -1.65
UBE4B-204ENST00000462658 WFDC2Q14508 124 aa4.72□□□□□ -1.65
UBE4B-204ENST00000462658 SOSTDC1Q6X4U4 206 aa4.72□□□□□ -1.65
UBE4B-204ENST00000462658 PPDPFQ9H3Y8 114 aa4.72□□□□□ -1.65
UBE4B-204ENST00000462658 LCE3CQ5T5A8 94 aa4.71□□□□□ -1.66
UBE4B-204ENST00000462658 Q6ZRN7 208 aaPredicted RBP4.71□□□□□ -1.66
UBE4B-204ENST00000462658 RAB37Q96AX2 223 aa4.71□□□□□ -1.66
UBE4B-204ENST00000462658 CARD19Q96LW7 228 aa4.71□□□□□ -1.66
UBE4B-204ENST00000462658 OCR1Q9BZK8 76 aa4.71□□□□□ -1.66
UBE4B-204ENST00000462658 SND1-IT1Q9HBX3 110 aa4.71□□□□□ -1.66
UBE4B-204ENST00000462658 HSPG2P98160 4391 aa4.71□□□□□ -1.66
UBE4B-204ENST00000462658 RYR1P21817 5038 aa4.7□□□□□ -1.66
UBE4B-204ENST00000462658 KIAA1109Q2LD37 5005 aa4.7□□□□□ -1.66
UBE4B-204ENST00000462658 A0A0B4J2C4 111 aa4.7□□□□□ -1.66
UBE4B-204ENST00000462658 LOC107984156A0A0G2JMH3 177 aa4.7□□□□□ -1.66
UBE4B-204ENST00000462658 LRCOL1A6NCL2 159 aa4.7□□□□□ -1.66
UBE4B-204ENST00000462658 C1orf134Q5TEV5 83 aa4.7□□□□□ -1.66
UBE4B-204ENST00000462658 ARL17AQ8IVW1 177 aa4.7□□□□□ -1.66
UBE4B-204ENST00000462658 PRO1854Q9UHT4 67 aa4.7□□□□□ -1.66
UBE4B-204ENST00000462658 NDUFC2-KCTD14E9PQ53 114 aa4.69□□□□□ -1.66
UBE4B-204ENST00000462658 K7ERU9 68 aa4.69□□□□□ -1.66
UBE4B-204ENST00000462658 RPL37AP8A6NKH3 93 aa4.68□□□□□ -1.66
UBE4B-204ENST00000462658 H3BUT2 72 aa4.68□□□□□ -1.66
UBE4B-204ENST00000462658 TLX1NBP0CAT3 122 aa4.68□□□□□ -1.66
UBE4B-204ENST00000462658 CNBPP62633 177 aaKnown RBP4.68□□□□□ -1.66
UBE4B-204ENST00000462658 NAA38Q9BRA0 125 aaKnown RBP4.68□□□□□ -1.66
UBE4B-204ENST00000462658 XAGE1AQ9HD64 81 aa4.68□□□□□ -1.66
UBE4B-204ENST00000462658 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.67□□□□□ -1.66
UBE4B-204ENST00000462658 IGKV2-28A0A075B6P5 120 aa4.67□□□□□ -1.66
UBE4B-204ENST00000462658 A0A087WTM6 91 aa4.67□□□□□ -1.66
UBE4B-204ENST00000462658 TRAV13-2A0A0B4J235 113 aa4.67□□□□□ -1.66
UBE4B-204ENST00000462658 A0A1B0GV72 72 aa4.67□□□□□ -1.66
UBE4B-204ENST00000462658 H7C2G1 150 aa4.67□□□□□ -1.66
UBE4B-204ENST00000462658 NDUFC2O95298 119 aa4.67□□□□□ -1.66
UBE4B-204ENST00000462658 TSPAN13O95857 204 aa4.67□□□□□ -1.66
UBE4B-204ENST00000462658 IGKV2D-28P01615 120 aa4.67□□□□□ -1.66
UBE4B-204ENST00000462658 RPL18AQ02543 176 aaKnown RBP4.67□□□□□ -1.66
UBE4B-204ENST00000462658 Q8N814 137 aa4.67□□□□□ -1.66
UBE4B-204ENST00000462658 VPS25Q9BRG1 176 aa4.67□□□□□ -1.66
UBE4B-204ENST00000462658 LOC107984640A0A0U1RRK4 108 aa4.66□□□□□ -1.66
UBE4B-204ENST00000462658 RPL13AP40429 203 aaKnown RBP4.66□□□□□ -1.66
UBE4B-204ENST00000462658 PRR3P79522 188 aaKnown RBP4.66□□□□□ -1.66
UBE4B-204ENST00000462658 Q1RN00 199 aa4.66□□□□□ -1.66
UBE4B-204ENST00000462658 OCIAD2Q56VL3 154 aa4.66□□□□□ -1.66
UBE4B-204ENST00000462658 REG3GQ6UW15 175 aa4.66□□□□□ -1.66
UBE4B-204ENST00000462658 A0A1W2PPM0 123 aa4.65□□□□□ -1.67
UBE4B-204ENST00000462658 C9orf129Q5T035 196 aaKnown RBP4.65□□□□□ -1.67
UBE4B-204ENST00000462658 LINC00337Q8N6G1 96 aa4.65□□□□□ -1.67
UBE4B-204ENST00000462658 Q8NDZ9 215 aa4.65□□□□□ -1.67
UBE4B-204ENST00000462658 OR13C6PQ8NH95 151 aa4.65□□□□□ -1.67
UBE4B-204ENST00000462658 PCLOQ9Y6V0 5065 aa4.64□□□□□ -1.67
UBE4B-204ENST00000462658 NCR3O14931 201 aa4.64□□□□□ -1.67
UBE4B-204ENST00000462658 FABP2P12104 132 aa4.64□□□□□ -1.67
UBE4B-204ENST00000462658 PSMB2P49721 201 aa4.64□□□□□ -1.67
UBE4B-204ENST00000462658 VAMP3Q15836 100 aa4.64□□□□□ -1.67
UBE4B-204ENST00000462658 C9orf163Q8N9P6 203 aa4.64□□□□□ -1.67
UBE4B-204ENST00000462658 TRBV10-2A0A0K0K1G8 114 aa4.63□□□□□ -1.67
UBE4B-204ENST00000462658 C16orf90A8MZG2 172 aa4.63□□□□□ -1.67
UBE4B-204ENST00000462658 RTL8CO15255 209 aa4.63□□□□□ -1.67
UBE4B-204ENST00000462658 SCGB1C2P0DMR2 95 aa4.63□□□□□ -1.67
UBE4B-204ENST00000462658 S100A7L2Q5SY68 101 aa4.63□□□□□ -1.67
UBE4B-204ENST00000462658 MTURNQ8N3F0 131 aa4.63□□□□□ -1.67
UBE4B-204ENST00000462658 PKIGQ9Y2B9 76 aa4.63□□□□□ -1.67
UBE4B-204ENST00000462658 ABCA13Q86UQ4 5058 aa4.62□□□□□ -1.67
UBE4B-204ENST00000462658 A0A096LNI7 61 aa4.62□□□□□ -1.67
UBE4B-204ENST00000462658 A0A1B0GVY2 172 aa4.62□□□□□ -1.67
UBE4B-204ENST00000462658 M0R378 163 aa4.62□□□□□ -1.67
UBE4B-204ENST00000462658 COX6CP09669 75 aa4.62□□□□□ -1.67
UBE4B-204ENST00000462658 LYRM7Q5U5X0 104 aa4.62□□□□□ -1.67
UBE4B-204ENST00000462658 SDIM1Q6ZPB5 146 aa4.62□□□□□ -1.67
UBE4B-204ENST00000462658 SMIM11BQ8TCY0 68 aa4.62□□□□□ -1.67
UBE4B-204ENST00000462658 TMEM126AQ9H061 195 aa4.62□□□□□ -1.67
UBE4B-204ENST00000462658 SPCS1Q9Y6A9 102 aa4.62□□□□□ -1.67
UBE4B-204ENST00000462658 FAT1Q14517 4588 aa4.61□□□□□ -1.67
UBE4B-204ENST00000462658 IGKV2-24A0A0C4DH68 120 aa4.61□□□□□ -1.67
UBE4B-204ENST00000462658 FAM168BA1KXE4 195 aa4.61□□□□□ -1.67
UBE4B-204ENST00000462658 IGLV6-57P01721 117 aa4.61□□□□□ -1.67
UBE4B-204ENST00000462658 RPL28P46779 137 aaKnown RBP4.61□□□□□ -1.67
UBE4B-204ENST00000462658 LINC01620Q4KN68 170 aa4.61□□□□□ -1.67
UBE4B-204ENST00000462658 GTF2H5Q6ZYL4 71 aa4.61□□□□□ -1.67
UBE4B-204ENST00000462658 NKAPP1Q8N9T2 125 aa4.61□□□□□ -1.67
UBE4B-204ENST00000462658 VPS13BQ7Z7G8 4022 aa4.6□□□□□ -1.67
UBE4B-204ENST00000462658 TRBV10-3A0A0K0K1G6 114 aa4.6□□□□□ -1.67
UBE4B-204ENST00000462658 K7EP34 96 aa4.6□□□□□ -1.67
UBE4B-204ENST00000462658 FUSP35637 526 aaKnown RBP eCLIP4.6□□□□□ -1.67
UBE4B-204ENST00000462658 TRBV20-1A0A075B6N2 111 aa4.59□□□□□ -1.67
UBE4B-204ENST00000462658 A0A1W2PNN7 141 aa4.59□□□□□ -1.67
UBE4B-204ENST00000462658 TCL1BO95988 128 aa4.59□□□□□ -1.67
UBE4B-204ENST00000462658 CHTF8P0CG12 524 aa4.59□□□□□ -1.67
UBE4B-204ENST00000462658 FAM19A5Q7Z5A7 132 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms