RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 NAA38Q9BRA0 125 aaKnown RBP6.31□□□□□ -1.4
SYN3-206ENST00000461446 LRP1Q07954 4544 aaKnown RBP6.31□□□□□ -1.4
SYN3-206ENST00000461446 VPREB1P12018 145 aa6.3□□□□□ -1.4
SYN3-206ENST00000461446 LYRM7Q5U5X0 104 aa6.3□□□□□ -1.4
SYN3-206ENST00000461446 TRAV13-2A0A0B4J235 113 aa6.29□□□□□ -1.4
SYN3-206ENST00000461446 NDUFC2O95298 119 aa6.29□□□□□ -1.4
SYN3-206ENST00000461446 Q1RN00 199 aa6.29□□□□□ -1.4
SYN3-206ENST00000461446 GTF2H5Q6ZYL4 71 aa6.29□□□□□ -1.4
SYN3-206ENST00000461446 MRPL55Q7Z7F7 128 aaKnown RBP6.29□□□□□ -1.4
SYN3-206ENST00000461446 Q8NDZ9 215 aa6.29□□□□□ -1.4
SYN3-206ENST00000461446 GAGE10A6NGK3 116 aa6.28□□□□□ -1.4
SYN3-206ENST00000461446 H7C2G1 150 aa6.28□□□□□ -1.4
SYN3-206ENST00000461446 RPL13AP40429 203 aaKnown RBP6.28□□□□□ -1.4
SYN3-206ENST00000461446 UBE2V1Q13404 147 aa6.28□□□□□ -1.4
SYN3-206ENST00000461446 KRTAP11-1Q8IUC1 163 aa6.28□□□□□ -1.4
SYN3-206ENST00000461446 NKAPP1Q8N9T2 125 aa6.28□□□□□ -1.4
SYN3-206ENST00000461446 SPCS1Q9Y6A9 102 aa6.28□□□□□ -1.4
SYN3-206ENST00000461446 PKHD1L1Q86WI1 4243 aa6.28□□□□□ -1.4
SYN3-206ENST00000461446 K7EP34 96 aa6.27□□□□□ -1.41
SYN3-206ENST00000461446 OXTP01178 125 aa6.27□□□□□ -1.41
SYN3-206ENST00000461446 PSMB2P49721 201 aa6.27□□□□□ -1.41
SYN3-206ENST00000461446 UBE2BP63146 152 aa6.27□□□□□ -1.41
SYN3-206ENST00000461446 LINC00167Q96N53 147 aa6.27□□□□□ -1.41
SYN3-206ENST00000461446 PSORS1C2Q9UIG4 136 aa6.27□□□□□ -1.41
SYN3-206ENST00000461446 IGKV2-28A0A075B6P5 120 aa6.26□□□□□ -1.41
SYN3-206ENST00000461446 IGKV2D-28P01615 120 aa6.26□□□□□ -1.41
SYN3-206ENST00000461446 COX6CP09669 75 aa6.26□□□□□ -1.41
SYN3-206ENST00000461446 SCGB1C2P0DMR2 95 aa6.26□□□□□ -1.41
SYN3-206ENST00000461446 PRR3P79522 188 aaKnown RBP6.26□□□□□ -1.41
SYN3-206ENST00000461446 FAT3Q8TDW7 4589 aa6.25□□□□□ -1.41
SYN3-206ENST00000461446 RPL37AP8A6NKH3 93 aa6.25□□□□□ -1.41
SYN3-206ENST00000461446 M0R378 163 aa6.25□□□□□ -1.41
SYN3-206ENST00000461446 LINC00337Q8N6G1 96 aa6.25□□□□□ -1.41
SYN3-206ENST00000461446 IGLV1-50A0A075B6I6 118 aa6.24□□□□□ -1.41
SYN3-206ENST00000461446 TRBV20-1A0A075B6N2 111 aa6.24□□□□□ -1.41
SYN3-206ENST00000461446 OR13C6PQ8NH95 151 aa6.24□□□□□ -1.41
SYN3-206ENST00000461446 TRBV10-2A0A0K0K1G8 114 aa6.23□□□□□ -1.41
SYN3-206ENST00000461446 TRIAP1O43715 76 aa6.23□□□□□ -1.41
SYN3-206ENST00000461446 MT1HL1P0DM35 61 aa6.23□□□□□ -1.41
SYN3-206ENST00000461446 RPL28P46779 137 aaKnown RBP6.23□□□□□ -1.41
SYN3-206ENST00000461446 C1orf137Q5JT78 98 aa6.23□□□□□ -1.41
SYN3-206ENST00000461446 NCR3O14931 201 aa6.22□□□□□ -1.41
SYN3-206ENST00000461446 TMEM126AQ9H061 195 aa6.22□□□□□ -1.41
SYN3-206ENST00000461446 TCL1BO95988 128 aa6.21□□□□□ -1.42
SYN3-206ENST00000461446 IGLV7-43P04211 117 aa6.21□□□□□ -1.42
SYN3-206ENST00000461446 TRBV10-3A0A0K0K1G6 114 aa6.2□□□□□ -1.42
SYN3-206ENST00000461446 BCE1O60756 84 aa6.2□□□□□ -1.42
SYN3-206ENST00000461446 ATXN8Q156A1 80 aa6.2□□□□□ -1.42
SYN3-206ENST00000461446 S100A7L2Q5SY68 101 aa6.2□□□□□ -1.42
SYN3-206ENST00000461446 SMIM11BQ8TCY0 68 aa6.2□□□□□ -1.42
SYN3-206ENST00000461446 H3BMG7 143 aa6.19□□□□□ -1.42
SYN3-206ENST00000461446 REG3GQ6UW15 175 aa6.19□□□□□ -1.42
SYN3-206ENST00000461446 SPINK6Q6UWN8 80 aa6.19□□□□□ -1.42
SYN3-206ENST00000461446 CBY1Q9Y3M2 126 aa6.19□□□□□ -1.42
SYN3-206ENST00000461446 H0YGX0 51 aa6.18□□□□□ -1.42
SYN3-206ENST00000461446 IGLV6-57P01721 117 aa6.18□□□□□ -1.42
SYN3-206ENST00000461446 KCNQ1DNQ9H478 68 aa6.18□□□□□ -1.42
SYN3-206ENST00000461446 F8W1H4 67 aa6.17□□□□□ -1.42
SYN3-206ENST00000461446 LST1O00453 97 aa6.17□□□□□ -1.42
SYN3-206ENST00000461446 PRYO14603 147 aa6.17□□□□□ -1.42
SYN3-206ENST00000461446 ZNF861PO60384 105 aa6.17□□□□□ -1.42
SYN3-206ENST00000461446 SPRR1AP35321 89 aa6.17□□□□□ -1.42
SYN3-206ENST00000461446 CLEC2BQ92478 149 aa6.17□□□□□ -1.42
SYN3-206ENST00000461446 LINC01600Q96MT4 127 aa6.16□□□□□ -1.42
SYN3-206ENST00000461446 FAM19A1Q7Z5A9 133 aa6.15□□□□□ -1.42
SYN3-206ENST00000461446 KRTAP13-1Q8IUC0 172 aa6.15□□□□□ -1.42
SYN3-206ENST00000461446 DIRC1Q969H9 104 aa6.15□□□□□ -1.42
SYN3-206ENST00000461446 TRAV23DV6A0A075B6W5 121 aa6.14□□□□□ -1.43
SYN3-206ENST00000461446 KRTAP4-16G5E9R7 235 aaPredicted RBP6.14□□□□□ -1.43
SYN3-206ENST00000461446 TRACP01848 142 aa6.14□□□□□ -1.43
SYN3-206ENST00000461446 UBE2AP49459 152 aa6.14□□□□□ -1.43
SYN3-206ENST00000461446 PRO0461Q9UI25 63 aa6.14□□□□□ -1.43
SYN3-206ENST00000461446 HMCN2Q8NDA2 5059 aa6.14□□□□□ -1.43
SYN3-206ENST00000461446 A0A1B0GX51 115 aa6.13□□□□□ -1.43
SYN3-206ENST00000461446 C9JAW5 83 aa6.13□□□□□ -1.43
SYN3-206ENST00000461446 H0Y9J4 135 aa6.13□□□□□ -1.43
SYN3-206ENST00000461446 PRLHP81277 87 aa6.13□□□□□ -1.43
SYN3-206ENST00000461446 C6orf99Q4VX62 202 aa6.13□□□□□ -1.43
SYN3-206ENST00000461446 TNXBP22105 4242 aa6.13□□□□□ -1.43
SYN3-206ENST00000461446 ETDCA0A1B0GVM5 59 aa6.12□□□□□ -1.43
SYN3-206ENST00000461446 SLC25A20O43772 301 aa6.12□□□□□ -1.43
SYN3-206ENST00000461446 SNCGO76070 127 aa6.12□□□□□ -1.43
SYN3-206ENST00000461446 MTURNQ8N3F0 131 aa6.12□□□□□ -1.43
SYN3-206ENST00000461446 TRBV7-6A0A0J9YX20 115 aa6.11□□□□□ -1.43
SYN3-206ENST00000461446 B5MCH6 92 aa6.11□□□□□ -1.43
SYN3-206ENST00000461446 H3BT86 120 aa6.11□□□□□ -1.43
SYN3-206ENST00000461446 ZNF73O43830 326 aaPredicted RBP6.11□□□□□ -1.43
SYN3-206ENST00000461446 KRTAP10-8P60410 259 aa6.11□□□□□ -1.43
SYN3-206ENST00000461446 FAM218AQ96MZ4 157 aa6.11□□□□□ -1.43
SYN3-206ENST00000461446 DNAL4O96015 105 aa6.1□□□□□ -1.43
SYN3-206ENST00000461446 SMCPP49901 116 aaPredicted RBP6.1□□□□□ -1.43
SYN3-206ENST00000461446 ANKRD29Q8N6D5 301 aa6.1□□□□□ -1.43
SYN3-206ENST00000461446 HIGD2AQ9BW72 106 aa6.1□□□□□ -1.43
SYN3-206ENST00000461446 COX7BP24311 80 aa6.09□□□□□ -1.43
SYN3-206ENST00000461446 Q6ZRX8 168 aa6.09□□□□□ -1.43
SYN3-206ENST00000461446 KRTAP1-4P0C5Y4 121 aa6.08□□□□□ -1.44
SYN3-206ENST00000461446 ETDBQ3ZM63 59 aa6.08□□□□□ -1.44
SYN3-206ENST00000461446 LINC00575Q6W349 94 aa6.08□□□□□ -1.44
SYN3-206ENST00000461446 hADV29S1A0JD25 119 aa6.07□□□□□ -1.44
SYN3-206ENST00000461446 BAALC-AS2P0C853 105 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms