RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 M0R143 59 aa8.91□□□□□ -0.98
COL5A3-202ENST00000461214 PLA2G1BP04054 148 aaKnown RBP8.91□□□□□ -0.98
COL5A3-202ENST00000461214 PSORS1C2Q9UIG4 136 aa8.91□□□□□ -0.98
COL5A3-202ENST00000461214 FXYD2P54710 66 aa8.9□□□□□ -0.98
COL5A3-202ENST00000461214 REG3GQ6UW15 175 aa8.9□□□□□ -0.98
COL5A3-202ENST00000461214 KRTAP11-1Q8IUC1 163 aa8.9□□□□□ -0.98
COL5A3-202ENST00000461214 OR13C6PQ8NH95 151 aa8.9□□□□□ -0.98
COL5A3-202ENST00000461214 DNAH8Q96JB1 4490 aa8.89□□□□□ -0.99
COL5A3-202ENST00000461214 TRAV23DV6A0A075B6W5 121 aa8.89□□□□□ -0.99
COL5A3-202ENST00000461214 A6NDN8 102 aa8.89□□□□□ -0.99
COL5A3-202ENST00000461214 BCE1O60756 84 aa8.88□□□□□ -0.99
COL5A3-202ENST00000461214 SPRR1AP35321 89 aa8.88□□□□□ -0.99
COL5A3-202ENST00000461214 CTAG1AP78358 180 aa8.88□□□□□ -0.99
COL5A3-202ENST00000461214 CFC1BP0CG36 223 aa8.87□□□□□ -0.99
COL5A3-202ENST00000461214 CFC1P0CG37 223 aa8.87□□□□□ -0.99
COL5A3-202ENST00000461214 C1orf137Q5JT78 98 aa8.87□□□□□ -0.99
COL5A3-202ENST00000461214 RAB37Q96AX2 223 aa8.87□□□□□ -0.99
COL5A3-202ENST00000461214 A0A1B0GWB2 263 aa8.86□□□□□ -0.99
COL5A3-202ENST00000461214 RPL13AP40429 203 aaKnown RBP8.86□□□□□ -0.99
COL5A3-202ENST00000461214 KRTAP10-4P60372 401 aaPredicted RBP8.86□□□□□ -0.99
COL5A3-202ENST00000461214 ZNF73O43830 326 aaPredicted RBP8.85□□□□□ -0.99
COL5A3-202ENST00000461214 BVES-AS1Q5T3Y7 98 aa8.85□□□□□ -0.99
COL5A3-202ENST00000461214 NHP2Q9NX24 153 aaKnown RBP8.85□□□□□ -0.99
COL5A3-202ENST00000461214 KRTAP4-16G5E9R7 235 aaPredicted RBP8.84□□□□□ -0.99
COL5A3-202ENST00000461214 IGLV7-43P04211 117 aa8.84□□□□□ -0.99
COL5A3-202ENST00000461214 DIRC1Q969H9 104 aa8.84□□□□□ -0.99
COL5A3-202ENST00000461214 ETDCA0A1B0GVM5 59 aa8.83□□□□□ -1
COL5A3-202ENST00000461214 H0Y9J4 135 aa8.83□□□□□ -1
COL5A3-202ENST00000461214 PRO1854Q9UHT4 67 aa8.83□□□□□ -1
COL5A3-202ENST00000461214 TRBV7-6A0A0J9YX20 115 aa8.82□□□□□ -1
COL5A3-202ENST00000461214 RPL28P46779 137 aaKnown RBP8.82□□□□□ -1
COL5A3-202ENST00000461214 HINT1P49773 126 aaPredicted RBP8.82□□□□□ -1
COL5A3-202ENST00000461214 FAM19A1Q7Z5A9 133 aa8.82□□□□□ -1
COL5A3-202ENST00000461214 RNF213Q63HN8 5207 aa8.81□□□□□ -1
COL5A3-202ENST00000461214 UBE2AP49459 152 aa8.81□□□□□ -1
COL5A3-202ENST00000461214 Q6ZRX8 168 aa8.81□□□□□ -1
COL5A3-202ENST00000461214 KRTAP13-1Q8IUC0 172 aa8.81□□□□□ -1
COL5A3-202ENST00000461214 SMIM11BQ8TCY0 68 aa8.81□□□□□ -1
COL5A3-202ENST00000461214 C6orf99Q4VX62 202 aa8.8□□□□□ -1
COL5A3-202ENST00000461214 B5MCH6 92 aa8.79□□□□□ -1
COL5A3-202ENST00000461214 ZNF861PO60384 105 aa8.79□□□□□ -1
COL5A3-202ENST00000461214 PRLHP81277 87 aa8.79□□□□□ -1
COL5A3-202ENST00000461214 K7ERJ3 54 aa8.78□□□□□ -1
COL5A3-202ENST00000461214 ELOF1P60002 83 aaKnown RBP8.78□□□□□ -1
COL5A3-202ENST00000461214 Q1RN00 199 aa8.78□□□□□ -1
COL5A3-202ENST00000461214 SPINK6Q6UWN8 80 aa8.78□□□□□ -1
COL5A3-202ENST00000461214 COX7BP24311 80 aa8.76□□□□□ -1.01
COL5A3-202ENST00000461214 VAMP3Q15836 100 aa8.76□□□□□ -1.01
COL5A3-202ENST00000461214 H7C2G1 150 aa8.75□□□□□ -1.01
COL5A3-202ENST00000461214 TSPAN13O95857 204 aa8.74□□□□□ -1.01
COL5A3-202ENST00000461214 OXTP01178 125 aa8.74□□□□□ -1.01
COL5A3-202ENST00000461214 BATFQ16520 125 aa8.74□□□□□ -1.01
COL5A3-202ENST00000461214 DHRS4-AS1Q9P1J3 65 aa8.74□□□□□ -1.01
COL5A3-202ENST00000461214 LRP1Q07954 4544 aaKnown RBP8.73□□□□□ -1.01
COL5A3-202ENST00000461214 SMCR5Q8TEV8 140 aa8.73□□□□□ -1.01
COL5A3-202ENST00000461214 Q9BRP9 147 aa8.73□□□□□ -1.01
COL5A3-202ENST00000461214 HIGD2AQ9BW72 106 aa8.73□□□□□ -1.01
COL5A3-202ENST00000461214 PCP4L1A6NKN8 68 aa8.72□□□□□ -1.01
COL5A3-202ENST00000461214 H0YGX0 51 aa8.71□□□□□ -1.02
COL5A3-202ENST00000461214 TRIAP1O43715 76 aa8.71□□□□□ -1.02
COL5A3-202ENST00000461214 ZNF706Q9Y5V0 76 aaPredicted RBP8.71□□□□□ -1.02
COL5A3-202ENST00000461214 COX6CP09669 75 aa8.7□□□□□ -1.02
COL5A3-202ENST00000461214 PSMB2P49721 201 aa8.7□□□□□ -1.02
COL5A3-202ENST00000461214 SNHG12Q9BXW3 62 aa8.7□□□□□ -1.02
COL5A3-202ENST00000461214 SLC25A20O43772 301 aa8.69□□□□□ -1.02
COL5A3-202ENST00000461214 LINC00575Q6W349 94 aa8.68□□□□□ -1.02
COL5A3-202ENST00000461214 A0A1B0GX51 115 aa8.67□□□□□ -1.02
COL5A3-202ENST00000461214 SNCGO76070 127 aa8.66□□□□□ -1.02
COL5A3-202ENST00000461214 COL5A1-AS1Q5SY13 56 aa8.66□□□□□ -1.02
COL5A3-202ENST00000461214 LYRM7Q5U5X0 104 aa8.66□□□□□ -1.02
COL5A3-202ENST00000461214 FAT3Q8TDW7 4589 aa8.66□□□□□ -1.02
COL5A3-202ENST00000461214 hADV29S1A0JD25 119 aa8.65□□□□□ -1.02
COL5A3-202ENST00000461214 ERC2-IT1O76042 136 aa8.65□□□□□ -1.02
COL5A3-202ENST00000461214 SPRR4Q96PI1 79 aa8.65□□□□□ -1.02
COL5A3-202ENST00000461214 TAX1BP3O14907 124 aa8.63□□□□□ -1.03
COL5A3-202ENST00000461214 KRTAP1-4P0C5Y4 121 aa8.63□□□□□ -1.03
COL5A3-202ENST00000461214 C9orf118A6NHY6 69 aa8.62□□□□□ -1.03
COL5A3-202ENST00000461214 FAM229BQ4G0N7 80 aa8.62□□□□□ -1.03
COL5A3-202ENST00000461214 LINC00483Q53H64 154 aa8.62□□□□□ -1.03
COL5A3-202ENST00000461214 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.62□□□□□ -1.03
COL5A3-202ENST00000461214 FAM218AQ96MZ4 157 aa8.62□□□□□ -1.03
COL5A3-202ENST00000461214 CLEC2BQ92478 149 aa8.61□□□□□ -1.03
COL5A3-202ENST00000461214 IGLV5-48A0A075B6I7 105 aa8.6□□□□□ -1.03
COL5A3-202ENST00000461214 H3BUT2 72 aa8.6□□□□□ -1.03
COL5A3-202ENST00000461214 SCGB1C2P0DMR2 95 aa8.6□□□□□ -1.03
COL5A3-202ENST00000461214 SPRR1BP22528 89 aa8.6□□□□□ -1.03
COL5A3-202ENST00000461214 OCIAD2Q56VL3 154 aa8.6□□□□□ -1.03
COL5A3-202ENST00000461214 Q6ZQY7 126 aa8.6□□□□□ -1.03
COL5A3-202ENST00000461214 LRP2P98164 4655 aa8.6□□□□□ -1.03
COL5A3-202ENST00000461214 LST1O00453 97 aa8.59□□□□□ -1.03
COL5A3-202ENST00000461214 PPDPFLQ8WWR9 84 aa8.59□□□□□ -1.03
COL5A3-202ENST00000461214 NAA38Q9BRA0 125 aaKnown RBP8.59□□□□□ -1.03
COL5A3-202ENST00000461214 TEX49A0A1B0GTD5 131 aa8.58□□□□□ -1.04
COL5A3-202ENST00000461214 DNAL4O96015 105 aa8.58□□□□□ -1.04
COL5A3-202ENST00000461214 GHRHP01286 108 aa8.58□□□□□ -1.04
COL5A3-202ENST00000461214 TRACP01848 142 aa8.58□□□□□ -1.04
COL5A3-202ENST00000461214 ST20-AS1Q8NBB2 130 aa8.58□□□□□ -1.04
COL5A3-202ENST00000461214 LINC01600Q96MT4 127 aa8.58□□□□□ -1.04
COL5A3-202ENST00000461214 KRTAP3-3Q9BYR6 98 aa8.58□□□□□ -1.04
COL5A3-202ENST00000461214 KRTAP3-2Q9BYR7 98 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms