RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 APC2O95996 2303 aa0.33□□□□□ -2.36
SYPL1-203ENST00000460770 CELSR2Q9HCU4 2923 aa0.33□□□□□ -2.36
SYPL1-203ENST00000460770 DMBT1Q9UGM3 2413 aaPredicted RBP0.33□□□□□ -2.36
SYPL1-203ENST00000460770 FMN2Q9NZ56 1722 aa0.33□□□□□ -2.36
SYPL1-203ENST00000460770 CFAP74Q9C0B2 1584 aa0.32□□□□□ -2.36
SYPL1-203ENST00000460770 PIK3C2BO00750 1634 aa0.32□□□□□ -2.36
SYPL1-203ENST00000460770 PTPN23Q9H3S7 1636 aa0.32□□□□□ -2.36
SYPL1-203ENST00000460770 DEFB131BA0A096LNP1 70 aa0.32□□□□□ -2.36
SYPL1-203ENST00000460770 ETDCA0A1B0GVM5 59 aa0.32□□□□□ -2.36
SYPL1-203ENST00000460770 FCER1GP30273 86 aa0.32□□□□□ -2.36
SYPL1-203ENST00000460770 LELP1Q5T871 98 aa0.32□□□□□ -2.36
SYPL1-203ENST00000460770 NCBP2-AS2Q69YL0 99 aa0.32□□□□□ -2.36
SYPL1-203ENST00000460770 CCDC88BA6NC98 1476 aa0.32□□□□□ -2.36
SYPL1-203ENST00000460770 RALGAPBQ86X10 1494 aa0.32□□□□□ -2.36
SYPL1-203ENST00000460770 RGPD8O14715 1765 aaPredicted RBP0.32□□□□□ -2.36
SYPL1-203ENST00000460770 RGPD5Q99666 1765 aa0.32□□□□□ -2.36
SYPL1-203ENST00000460770 SCN11AQ9UI33 1791 aa0.32□□□□□ -2.36
SYPL1-203ENST00000460770 ALKQ9UM73 1620 aa0.31□□□□□ -2.36
SYPL1-203ENST00000460770 HFM1A2PYH4 1435 aa0.31□□□□□ -2.36
SYPL1-203ENST00000460770 SFTA3P0C7M3 94 aa0.31□□□□□ -2.36
SYPL1-203ENST00000460770 SERF2P84101 59 aa0.31□□□□□ -2.36
SYPL1-203ENST00000460770 NMES1Q9C002 83 aa0.31□□□□□ -2.36
SYPL1-203ENST00000460770 MACF1Q9UPN3 7388 aaKnown RBP0.31□□□□□ -2.36
SYPL1-203ENST00000460770 LMTK2Q8IWU2 1503 aa0.31□□□□□ -2.36
SYPL1-203ENST00000460770 TMEM131LA2VDJ0 1609 aa0.31□□□□□ -2.36
SYPL1-203ENST00000460770 USP32Q8NFA0 1604 aa0.31□□□□□ -2.36
SYPL1-203ENST00000460770 ZNF469Q96JG9 3925 aaPredicted RBP0.31□□□□□ -2.36
SYPL1-203ENST00000460770 SYNE2Q8WXH0 6885 aaKnown RBP0.3□□□□□ -2.36
SYPL1-203ENST00000460770 RGPD1P0DJD0 1748 aa0.3□□□□□ -2.36
SYPL1-203ENST00000460770 LTN1O94822 1766 aa0.3□□□□□ -2.36
SYPL1-203ENST00000460770 PCNX1Q96RV3 2341 aa0.3□□□□□ -2.36
SYPL1-203ENST00000460770 H0YGG7 62 aa0.3□□□□□ -2.36
SYPL1-203ENST00000460770 CRIP1P50238 77 aa0.3□□□□□ -2.36
SYPL1-203ENST00000460770 KCNQ1DNQ9H478 68 aa0.3□□□□□ -2.36
SYPL1-203ENST00000460770 ABCA8O94911 1581 aa0.3□□□□□ -2.36
SYPL1-203ENST00000460770 NCOR2Q9Y618 2525 aa0.3□□□□□ -2.36
SYPL1-203ENST00000460770 CHD9Q3L8U1 2897 aa0.3□□□□□ -2.36
SYPL1-203ENST00000460770 PPRC1Q5VV67 1664 aaKnown RBP0.3□□□□□ -2.36
SYPL1-203ENST00000460770 BCORQ6W2J9 1755 aa0.29□□□□□ -2.36
SYPL1-203ENST00000460770 EP300Q09472 2414 aaPredicted RBP0.29□□□□□ -2.36
SYPL1-203ENST00000460770 PIEZO2Q9H5I5 2752 aa0.29□□□□□ -2.36
SYPL1-203ENST00000460770 MAGI3Q5TCQ9 1506 aa0.29□□□□□ -2.36
SYPL1-203ENST00000460770 DIP2AQ14689 1571 aa0.29□□□□□ -2.36
SYPL1-203ENST00000460770 UNC79Q9P2D8 2635 aa0.29□□□□□ -2.36
SYPL1-203ENST00000460770 K7EMI3 77 aa0.29□□□□□ -2.36
SYPL1-203ENST00000460770 UBR5O95071 2799 aaPredicted RBP0.29□□□□□ -2.36
SYPL1-203ENST00000460770 ARFGEF2Q9Y6D5 1785 aa0.29□□□□□ -2.36
SYPL1-203ENST00000460770 ASXL1Q8IXJ9 1541 aa0.28□□□□□ -2.36
SYPL1-203ENST00000460770 MDN1Q9NU22 5596 aa0.28□□□□□ -2.36
SYPL1-203ENST00000460770 ATRQ13535 2644 aa0.28□□□□□ -2.36
SYPL1-203ENST00000460770 MYO5CQ9NQX4 1742 aa0.28□□□□□ -2.36
SYPL1-203ENST00000460770 M0R2T5 61 aa0.28□□□□□ -2.36
SYPL1-203ENST00000460770 IAPPP10997 89 aa0.28□□□□□ -2.36
SYPL1-203ENST00000460770 DEFB135Q30KP9 77 aa0.28□□□□□ -2.36
SYPL1-203ENST00000460770 DEFB114Q30KQ6 69 aa0.28□□□□□ -2.36
SYPL1-203ENST00000460770 MINOS1Q5TGZ0 78 aa0.28□□□□□ -2.36
SYPL1-203ENST00000460770 IGSF10Q6WRI0 2623 aa0.28□□□□□ -2.37
SYPL1-203ENST00000460770 CD163L1Q9NR16 1453 aa0.28□□□□□ -2.37
SYPL1-203ENST00000460770 EFCAB5A4FU69 1503 aa0.28□□□□□ -2.37
SYPL1-203ENST00000460770 NWD1Q149M9 1564 aa0.28□□□□□ -2.37
SYPL1-203ENST00000460770 CEP170BQ9Y4F5 1589 aaPredicted RBP0.28□□□□□ -2.37
SYPL1-203ENST00000460770 NBASA2RRP1 2371 aa0.27□□□□□ -2.37
SYPL1-203ENST00000460770 QSER1Q2KHR3 1735 aa0.27□□□□□ -2.37
SYPL1-203ENST00000460770 DOT1LQ8TEK3 1739 aa0.27□□□□□ -2.37
SYPL1-203ENST00000460770 CHD6Q8TD26 2715 aa0.27□□□□□ -2.37
SYPL1-203ENST00000460770 M0R1W7 72 aa0.27□□□□□ -2.37
SYPL1-203ENST00000460770 KRTAP21-1Q3LI58 79 aa0.27□□□□□ -2.37
SYPL1-203ENST00000460770 REV3LO60673 3130 aa0.27□□□□□ -2.37
SYPL1-203ENST00000460770 CSMD3Q7Z407 3707 aa0.27□□□□□ -2.37
SYPL1-203ENST00000460770 IQGAP3Q86VI3 1631 aa0.27□□□□□ -2.37
SYPL1-203ENST00000460770 OTOGQ6ZRI0 2925 aa0.27□□□□□ -2.37
SYPL1-203ENST00000460770 FSIP2Q5CZC0 6907 aa0.27□□□□□ -2.37
SYPL1-203ENST00000460770 HIVEP3Q5T1R4 2406 aa0.26□□□□□ -2.37
SYPL1-203ENST00000460770 LYNX1G3V0Z9 82 aa0.26□□□□□ -2.37
SYPL1-203ENST00000460770 DEFB130BP0DP73 79 aa0.26□□□□□ -2.37
SYPL1-203ENST00000460770 DEFB130AP0DP74 79 aa0.26□□□□□ -2.37
SYPL1-203ENST00000460770 ERICH3Q5RHP9 1530 aa0.26□□□□□ -2.37
SYPL1-203ENST00000460770 CDC42BPGQ6DT37 1551 aa0.26□□□□□ -2.37
SYPL1-203ENST00000460770 DNMBPQ6XZF7 1577 aa0.26□□□□□ -2.37
SYPL1-203ENST00000460770 ZNF831Q5JPB2 1677 aa0.26□□□□□ -2.37
SYPL1-203ENST00000460770 PREX1Q8TCU6 1659 aa0.26□□□□□ -2.37
SYPL1-203ENST00000460770 POLR1AO95602 1720 aaPredicted RBP0.26□□□□□ -2.37
SYPL1-203ENST00000460770 ACANP16112 2415 aa0.26□□□□□ -2.37
SYPL1-203ENST00000460770 RICTORQ6R327 1708 aa0.25□□□□□ -2.37
SYPL1-203ENST00000460770 LRRIQ1Q96JM4 1722 aa0.25□□□□□ -2.37
SYPL1-203ENST00000460770 H0YAA0 97 aa0.25□□□□□ -2.37
SYPL1-203ENST00000460770 C6orf48Q9UBA6 75 aa0.25□□□□□ -2.37
SYPL1-203ENST00000460770 SYNE1Q8NF91 8797 aaKnown RBP0.25□□□□□ -2.37
SYPL1-203ENST00000460770 PKD1L2Q7Z442 2459 aa0.25□□□□□ -2.37
SYPL1-203ENST00000460770 TIAM2Q8IVF5 1701 aa0.24□□□□□ -2.37
SYPL1-203ENST00000460770 TNRC6CQ9HCJ0 1690 aaKnown RBP0.24□□□□□ -2.37
SYPL1-203ENST00000460770 ADAMTS12P58397 1594 aa0.24□□□□□ -2.37
SYPL1-203ENST00000460770 KMT2DO14686 5537 aa0.24□□□□□ -2.37
SYPL1-203ENST00000460770 CELSR1Q9NYQ6 3014 aa0.24□□□□□ -2.37
SYPL1-203ENST00000460770 ABRACLQ9P1F3 81 aa0.24□□□□□ -2.37
SYPL1-203ENST00000460770 SPG11Q96JI7 2443 aa0.24□□□□□ -2.37
SYPL1-203ENST00000460770 ZC3H13Q5T200 1668 aaKnown RBP0.24□□□□□ -2.37
SYPL1-203ENST00000460770 CFAP43Q8NDM7 1665 aa0.24□□□□□ -2.37
SYPL1-203ENST00000460770 MROH1Q8NDA8 1641 aa0.24□□□□□ -2.37
SYPL1-203ENST00000460770 MADDQ8WXG6 1647 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 616.1 ms