RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 SMR3BP02814 79 aaPredicted RBP4.18□□□□□ -1.74
HLA-DQA1-205ENST00000460633 UTRNP46939 3433 aa4.17□□□□□ -1.74
HLA-DQA1-205ENST00000460633 ZNF462Q96JM2 2506 aa4.17□□□□□ -1.74
HLA-DQA1-205ENST00000460633 CSPG4Q6UVK1 2322 aa4.17□□□□□ -1.74
HLA-DQA1-205ENST00000460633 SPTBN4Q9H254 2564 aa4.17□□□□□ -1.74
HLA-DQA1-205ENST00000460633 CEP350Q5VT06 3117 aa4.17□□□□□ -1.74
HLA-DQA1-205ENST00000460633 KRTAP10-3P60369 221 aa4.17□□□□□ -1.74
HLA-DQA1-205ENST00000460633 SPTBN5Q9NRC6 3674 aaKnown RBP4.17□□□□□ -1.74
HLA-DQA1-205ENST00000460633 C9orf129Q5T035 196 aaKnown RBP4.16□□□□□ -1.74
HLA-DQA1-205ENST00000460633 ABCA2Q9BZC7 2435 aa4.16□□□□□ -1.74
HLA-DQA1-205ENST00000460633 Q6ZRX8 168 aa4.16□□□□□ -1.74
HLA-DQA1-205ENST00000460633 CHD7Q9P2D1 2997 aa4.16□□□□□ -1.74
HLA-DQA1-205ENST00000460633 PIEZO2Q9H5I5 2752 aa4.15□□□□□ -1.74
HLA-DQA1-205ENST00000460633 CNBPP62633 177 aaKnown RBP4.15□□□□□ -1.74
HLA-DQA1-205ENST00000460633 Q5VSD8 79 aa4.15□□□□□ -1.74
HLA-DQA1-205ENST00000460633 TLN1Q9Y490 2541 aaKnown RBP4.15□□□□□ -1.74
HLA-DQA1-205ENST00000460633 USP24Q9UPU5 2620 aa4.15□□□□□ -1.75
HLA-DQA1-205ENST00000460633 A8MUN3 132 aa4.15□□□□□ -1.75
HLA-DQA1-205ENST00000460633 C1orf64Q8NEQ6 169 aa4.15□□□□□ -1.75
HLA-DQA1-205ENST00000460633 ST20-AS1Q8NBB2 130 aa4.14□□□□□ -1.75
HLA-DQA1-205ENST00000460633 ELOF1P60002 83 aaKnown RBP4.14□□□□□ -1.75
HLA-DQA1-205ENST00000460633 MUC4Q99102 2169 aa4.14□□□□□ -1.75
HLA-DQA1-205ENST00000460633 A0A1B0GU69 56 aa4.14□□□□□ -1.75
HLA-DQA1-205ENST00000460633 A0A0C4DFX4 3053 aa4.14□□□□□ -1.75
HLA-DQA1-205ENST00000460633 DNAH14Q0VDD8 3507 aa4.13□□□□□ -1.75
HLA-DQA1-205ENST00000460633 TLX1NBP0CAT3 122 aa4.13□□□□□ -1.75
HLA-DQA1-205ENST00000460633 KLKP1Q107X0 134 aa4.13□□□□□ -1.75
HLA-DQA1-205ENST00000460633 C6orf48Q9UBA6 75 aa4.13□□□□□ -1.75
HLA-DQA1-205ENST00000460633 SPINT4Q6UDR6 99 aa4.13□□□□□ -1.75
HLA-DQA1-205ENST00000460633 MYO18BQ8IUG5 2567 aa4.12□□□□□ -1.75
HLA-DQA1-205ENST00000460633 NAV2Q8IVL1 2488 aa4.12□□□□□ -1.75
HLA-DQA1-205ENST00000460633 WDFY3Q8IZQ1 3526 aa4.12□□□□□ -1.75
HLA-DQA1-205ENST00000460633 LINC00483Q53H64 154 aa4.12□□□□□ -1.75
HLA-DQA1-205ENST00000460633 LINC01600Q96MT4 127 aa4.11□□□□□ -1.75
HLA-DQA1-205ENST00000460633 ERC2-IT1O76042 136 aa4.11□□□□□ -1.75
HLA-DQA1-205ENST00000460633 PTPN13Q12923 2485 aa4.11□□□□□ -1.75
HLA-DQA1-205ENST00000460633 CEP295Q9C0D2 2601 aa4.11□□□□□ -1.75
HLA-DQA1-205ENST00000460633 TRBV7-4A0A0J9YYF1 115 aa4.11□□□□□ -1.75
HLA-DQA1-205ENST00000460633 IGLV6-57P01721 117 aa4.11□□□□□ -1.75
HLA-DQA1-205ENST00000460633 KMT2BQ9UMN6 2715 aaPredicted RBP4.11□□□□□ -1.75
HLA-DQA1-205ENST00000460633 MRPL34Q9BQ48 92 aaKnown RBP4.1□□□□□ -1.75
HLA-DQA1-205ENST00000460633 LINC01554Q52M75 96 aa4.09□□□□□ -1.75
HLA-DQA1-205ENST00000460633 CCDC168Q8NDH2 2452 aa4.09□□□□□ -1.75
HLA-DQA1-205ENST00000460633 ANKRD17O75179 2603 aaKnown RBP4.09□□□□□ -1.75
HLA-DQA1-205ENST00000460633 LINC00612Q8N6U2 182 aa4.08□□□□□ -1.76
HLA-DQA1-205ENST00000460633 IGLV8-61A0A075B6I0 122 aa4.08□□□□□ -1.76
HLA-DQA1-205ENST00000460633 A8MWP4 228 aa4.08□□□□□ -1.76
HLA-DQA1-205ENST00000460633 K7EQZ3 153 aa4.07□□□□□ -1.76
HLA-DQA1-205ENST00000460633 BRCA2P51587 3418 aa4.07□□□□□ -1.76
HLA-DQA1-205ENST00000460633 OBSCN-AS1Q96MR7 158 aa4.07□□□□□ -1.76
HLA-DQA1-205ENST00000460633 CSNK1G2-AS1Q8NCQ2 148 aa4.07□□□□□ -1.76
HLA-DQA1-205ENST00000460633 CRIPTQ9P021 101 aa4.07□□□□□ -1.76
HLA-DQA1-205ENST00000460633 PLAC4Q8WY50 150 aa4.06□□□□□ -1.76
HLA-DQA1-205ENST00000460633 C9orf92A6NGG3 77 aa4.06□□□□□ -1.76
HLA-DQA1-205ENST00000460633 C5orf42Q9H799 3197 aa4.06□□□□□ -1.76
HLA-DQA1-205ENST00000460633 EPG5Q9HCE0 2579 aa4.05□□□□□ -1.76
HLA-DQA1-205ENST00000460633 CSAG1Q6PB30 78 aa4.05□□□□□ -1.76
HLA-DQA1-205ENST00000460633 CHD8Q9HCK8 2581 aa4.04□□□□□ -1.76
HLA-DQA1-205ENST00000460633 FAM104AQ969W3 186 aa4.04□□□□□ -1.76
HLA-DQA1-205ENST00000460633 KCNQ1DNQ9H478 68 aa4.04□□□□□ -1.76
HLA-DQA1-205ENST00000460633 COA5Q86WW8 74 aa4.04□□□□□ -1.76
HLA-DQA1-205ENST00000460633 Q1T7F1 81 aa4.04□□□□□ -1.76
HLA-DQA1-205ENST00000460633 CYP4F30PQ9H0H9 118 aa4.04□□□□□ -1.76
HLA-DQA1-205ENST00000460633 CAMK2N1Q7Z7J9 78 aa4.03□□□□□ -1.76
HLA-DQA1-205ENST00000460633 SPRR4Q96PI1 79 aa4.03□□□□□ -1.76
HLA-DQA1-205ENST00000460633 A0A1B0GVX0 72 aa4.03□□□□□ -1.76
HLA-DQA1-205ENST00000460633 KRTAP16-1A8MUX0 517 aa4.02□□□□□ -1.77
HLA-DQA1-205ENST00000460633 PRR34Q9NV39 138 aa4.02□□□□□ -1.77
HLA-DQA1-205ENST00000460633 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
HLA-DQA1-205ENST00000460633 PLAC8Q9NZF1 115 aa4.01□□□□□ -1.77
HLA-DQA1-205ENST00000460633 FAM168BA1KXE4 195 aa4.01□□□□□ -1.77
HLA-DQA1-205ENST00000460633 MYO9AB2RTY4 2548 aa4.01□□□□□ -1.77
HLA-DQA1-205ENST00000460633 F8P00451 2351 aa4.01□□□□□ -1.77
HLA-DQA1-205ENST00000460633 C15orf56Q8N910 161 aa4.01□□□□□ -1.77
HLA-DQA1-205ENST00000460633 Q8N377 158 aa4□□□□□ -1.77
HLA-DQA1-205ENST00000460633 C8orf17Q9NRJ1 99 aa4□□□□□ -1.77
HLA-DQA1-205ENST00000460633 A0A0G2JQZ4 141 aa3.99□□□□□ -1.77
HLA-DQA1-205ENST00000460633 A0A1W2PNN7 141 aa3.99□□□□□ -1.77
HLA-DQA1-205ENST00000460633 MYO15AQ9UKN7 3530 aa3.99□□□□□ -1.77
HLA-DQA1-205ENST00000460633 PRRC2CQ9Y520 2896 aaKnown RBP3.99□□□□□ -1.77
HLA-DQA1-205ENST00000460633 FN1P02751 2386 aaKnown RBP3.98□□□□□ -1.77
HLA-DQA1-205ENST00000460633 GIG44P09565 113 aaPredicted RBP3.98□□□□□ -1.77
HLA-DQA1-205ENST00000460633 DSCR10P59022 87 aa3.98□□□□□ -1.77
HLA-DQA1-205ENST00000460633 OCR1Q9BZK8 76 aa3.98□□□□□ -1.77
HLA-DQA1-205ENST00000460633 IGFL1Q6UW32 110 aa3.98□□□□□ -1.77
HLA-DQA1-205ENST00000460633 CDC42SE1Q9NRR8 79 aa3.98□□□□□ -1.77
HLA-DQA1-205ENST00000460633 Q75L30 129 aa3.98□□□□□ -1.77
HLA-DQA1-205ENST00000460633 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
HLA-DQA1-205ENST00000460633 FLG2Q5D862 2391 aaPredicted RBP3.97□□□□□ -1.77
HLA-DQA1-205ENST00000460633 Q8N1X5 172 aa3.96□□□□□ -1.78
HLA-DQA1-205ENST00000460633 IGSF10Q6WRI0 2623 aa3.96□□□□□ -1.78
HLA-DQA1-205ENST00000460633 A0A1W2PNM2 257 aa3.96□□□□□ -1.78
HLA-DQA1-205ENST00000460633 HELZ2Q9BYK8 2649 aaKnown RBP3.96□□□□□ -1.78
HLA-DQA1-205ENST00000460633 USP9YO00507 2555 aaPredicted RBP3.96□□□□□ -1.78
HLA-DQA1-205ENST00000460633 UQCR11O14957 56 aa3.95□□□□□ -1.78
HLA-DQA1-205ENST00000460633 UBR5O95071 2799 aaPredicted RBP3.95□□□□□ -1.78
HLA-DQA1-205ENST00000460633 DMDP11532 3685 aa3.95□□□□□ -1.78
HLA-DQA1-205ENST00000460633 S4R3F8 94 aa3.94□□□□□ -1.78
HLA-DQA1-205ENST00000460633 LRRK2Q5S007 2527 aa3.94□□□□□ -1.78
HLA-DQA1-205ENST00000460633 Q5VV11 94 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms