RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 IGKV2-40A0A087WW87 121 aaPredicted RBP0.89□□□□□ -2.27
RFC4-211ENST00000460408 A0A087WXM4 84 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 TRAV14DV4A0A0A6YYC5 116 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 TCRBV3S1A0A5B6 114 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 IGLC7A0M8Q6 106 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 TMEM14DPA8MWL7 114 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 TMEM262E9PQX1 116 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 J3QR89 54 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 K7EIM0 57 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 K7EP34 96 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 TMEM256-PLSCR3K7ERE1 68 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 K7ERJ3 54 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 M0R2P5 195 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 IGKV2D-40P01614 121 aaPredicted RBP0.89□□□□□ -2.27
RFC4-211ENST00000460408 CXCL1P09341 107 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 IFITM1P13164 125 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 ADCYAP1P18509 176 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 RNASE4P34096 147 aaKnown RBP0.89□□□□□ -2.27
RFC4-211ENST00000460408 SNRPD3P62318 126 aaKnown RBP0.89□□□□□ -2.27
RFC4-211ENST00000460408 Q56UQ5 140 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 GDF5OSQ5U4N7 250 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 MRPL54Q6P161 138 aaKnown RBP0.89□□□□□ -2.27
RFC4-211ENST00000460408 TMEM91Q6ZNR0 172 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 LINC00305Q7Z4B0 112 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 TEN1Q86WV5 123 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 SVBPQ8N300 66 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 OR5AK2Q8NH90 309 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 TMEM167AQ8TBQ9 72 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 S100ZQ8WXG8 99 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 DIRC1Q969H9 104 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 TOMM6Q96B49 74 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 C2orf50Q96LR7 162 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 HYLS1Q96M11 299 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 AP1S3Q96PC3 154 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 SCGB3A1Q96QR1 104 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 C20orf78Q9BR46 151 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 VAMP8Q9BV40 100 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 SEC11CQ9BY50 192 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 IMUPQ9GZP8 106 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 COMMD5Q9GZQ3 224 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 SLC35B3Q9H1N7 401 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 BANF2Q9H503 90 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 SMCO4Q9NRQ5 59 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 FKBP11Q9NYL4 201 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 BET1LQ9NYM9 111 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 ABRACLQ9P1F3 81 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 LAMTOR3Q9UHA4 124 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 LSM2Q9Y333 95 aaKnown RBP0.89□□□□□ -2.27
RFC4-211ENST00000460408 AP4S1Q9Y587 144 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 TRAV9-1A0A075B6T8 112 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 A0A096LPF7 62 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 TRAV13-1A0A0B4J241 112 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 TRBV27A0A0K0K1C4 114 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 RBAKDNA6NC62 111 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 A6NN06 94 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 A8MWV9 139 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 H3BMG7 143 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 GNGT2O14610 69 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 UQCRQO14949 82 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 HIST1H2BKO60814 126 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 NDUFB6O95139 128 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 SFT2D2O95562 160 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 TCL1BO95988 128 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 MT-ND6P03923 174 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 CD3DP04234 171 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 HIST1H2BJP06899 126 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 PYYP10082 97 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 FABP2P12104 132 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 SLC25A6P12236 298 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 HLA-DRB4P13762 266 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 FABP4P15090 132 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 SPRR2EP22531 72 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 SDC2P34741 201 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 SPRR2BP35325 72 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 SPRR2AP35326 72 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 SNRPGP62308 76 aaKnown RBP0.88□□□□□ -2.27
RFC4-211ENST00000460408 WT1-ASQ06250 92 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 IQCJQ1A5X6 159 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 LINC01554Q52M75 96 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 C9orf153Q5TBE3 101 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 C6orf201Q7Z4U5 140 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 BPIFA4PQ86YQ2 179 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 WFDC10BQ8IUB3 73 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 DSCR8Q96T75 97 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 S100A13Q99584 98 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 CKLFQ9UBR5 152 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 TIMM8BQ9Y5J9 83 aaPredicted RBP0.88□□□□□ -2.27
RFC4-211ENST00000460408 HLA-DRB4X5D2U9 266 aa0.88□□□□□ -2.27
RFC4-211ENST00000460408 TRBV6-7A0A0A0MS04 114 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.87□□□□□ -2.27
RFC4-211ENST00000460408 C3orf85A0A1B0GTC6 90 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 I3L2K1 104 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 J3QLW9 94 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 HYPMO75409 117 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 IGLC2P0DOY2 106 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 IGLC3P0DOY3 106 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 HBBP68871 147 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 LINC01556Q5JQF7 62 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 MIC13Q5XKP0 118 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 C12orf73Q69YU5 71 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms