RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 FAM19A1Q7Z5A9 133 aa7.65□□□□□ -1.18
HDAC4-206ENST00000460235 IGLV7-43P04211 117 aa7.64□□□□□ -1.19
HDAC4-206ENST00000460235 COX6CP09669 75 aa7.64□□□□□ -1.19
HDAC4-206ENST00000460235 A0A1B0GWB2 263 aa7.63□□□□□ -1.19
HDAC4-206ENST00000460235 SPRR1AP35321 89 aa7.63□□□□□ -1.19
HDAC4-206ENST00000460235 Q5VSD8 79 aa7.63□□□□□ -1.19
HDAC4-206ENST00000460235 PKHD1P08F94 4074 aa7.62□□□□□ -1.19
HDAC4-206ENST00000460235 SLC25A20O43772 301 aa7.62□□□□□ -1.19
HDAC4-206ENST00000460235 ZNF861PO60384 105 aa7.62□□□□□ -1.19
HDAC4-206ENST00000460235 INAFM2P0DMQ5 153 aa7.62□□□□□ -1.19
HDAC4-206ENST00000460235 C6orf99Q4VX62 202 aa7.62□□□□□ -1.19
HDAC4-206ENST00000460235 SMIM11BQ8TCY0 68 aa7.62□□□□□ -1.19
HDAC4-206ENST00000460235 H0YGX0 51 aa7.61□□□□□ -1.19
HDAC4-206ENST00000460235 H7C2G1 150 aa7.61□□□□□ -1.19
HDAC4-206ENST00000460235 COX7BP24311 80 aa7.61□□□□□ -1.19
HDAC4-206ENST00000460235 SPINK6Q6UWN8 80 aa7.61□□□□□ -1.19
HDAC4-206ENST00000460235 DHRS4-AS1Q9P1J3 65 aa7.61□□□□□ -1.19
HDAC4-206ENST00000460235 PSMB2P49721 201 aa7.6□□□□□ -1.19
HDAC4-206ENST00000460235 BATFQ16520 125 aa7.6□□□□□ -1.19
HDAC4-206ENST00000460235 LYRM7Q5U5X0 104 aa7.6□□□□□ -1.19
HDAC4-206ENST00000460235 Q6ZRX8 168 aa7.6□□□□□ -1.19
HDAC4-206ENST00000460235 PCP4L1A6NKN8 68 aa7.59□□□□□ -1.19
HDAC4-206ENST00000460235 GHRHP01286 108 aa7.59□□□□□ -1.19
HDAC4-206ENST00000460235 ZNF706Q9Y5V0 76 aaPredicted RBP7.59□□□□□ -1.19
HDAC4-206ENST00000460235 DNAH5Q8TE73 4624 aa7.58□□□□□ -1.2
HDAC4-206ENST00000460235 B5MCH6 92 aa7.58□□□□□ -1.2
HDAC4-206ENST00000460235 ELOF1P60002 83 aaKnown RBP7.58□□□□□ -1.2
HDAC4-206ENST00000460235 KRTAP11-1Q8IUC1 163 aa7.58□□□□□ -1.2
HDAC4-206ENST00000460235 KRTAP4-16G5E9R7 235 aaPredicted RBP7.57□□□□□ -1.2
HDAC4-206ENST00000460235 HIGD2AQ9BW72 106 aa7.57□□□□□ -1.2
HDAC4-206ENST00000460235 LRP1BQ9NZR2 4599 aa7.57□□□□□ -1.2
HDAC4-206ENST00000460235 SCGB1C2P0DMR2 95 aa7.56□□□□□ -1.2
HDAC4-206ENST00000460235 PRLHP81277 87 aa7.56□□□□□ -1.2
HDAC4-206ENST00000460235 DYNC1H1Q14204 4646 aaKnown RBP7.56□□□□□ -1.2
HDAC4-206ENST00000460235 A0A1B0GX51 115 aa7.55□□□□□ -1.2
HDAC4-206ENST00000460235 K7ERJ3 54 aa7.55□□□□□ -1.2
HDAC4-206ENST00000460235 COL5A1-AS1Q5SY13 56 aa7.55□□□□□ -1.2
HDAC4-206ENST00000460235 TSPAN13O95857 204 aa7.54□□□□□ -1.2
HDAC4-206ENST00000460235 KRTAP13-1Q8IUC0 172 aa7.54□□□□□ -1.2
HDAC4-206ENST00000460235 SMCR5Q8TEV8 140 aa7.53□□□□□ -1.2
HDAC4-206ENST00000460235 DNAH8Q96JB1 4490 aa7.52□□□□□ -1.2
HDAC4-206ENST00000460235 hADV29S1A0JD25 119 aa7.52□□□□□ -1.21
HDAC4-206ENST00000460235 H3BQ85 93 aa7.52□□□□□ -1.21
HDAC4-206ENST00000460235 OCIAD2Q56VL3 154 aa7.52□□□□□ -1.21
HDAC4-206ENST00000460235 LINC00575Q6W349 94 aa7.52□□□□□ -1.21
HDAC4-206ENST00000460235 TRIAP1O43715 76 aa7.51□□□□□ -1.21
HDAC4-206ENST00000460235 DNAL4O96015 105 aa7.51□□□□□ -1.21
HDAC4-206ENST00000460235 KRTAP10-4P60372 401 aaPredicted RBP7.51□□□□□ -1.21
HDAC4-206ENST00000460235 SNHG12Q9BXW3 62 aa7.51□□□□□ -1.21
HDAC4-206ENST00000460235 TRBV20-1A0A075B6N2 111 aa7.49□□□□□ -1.21
HDAC4-206ENST00000460235 C9orf118A6NHY6 69 aa7.49□□□□□ -1.21
HDAC4-206ENST00000460235 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.49□□□□□ -1.21
HDAC4-206ENST00000460235 Q9BRP9 147 aa7.49□□□□□ -1.21
HDAC4-206ENST00000460235 PPDPFLQ8WWR9 84 aa7.48□□□□□ -1.21
HDAC4-206ENST00000460235 EPPK1P58107 5090 aaKnown RBP7.47□□□□□ -1.21
HDAC4-206ENST00000460235 FABP2P12104 132 aa7.47□□□□□ -1.21
HDAC4-206ENST00000460235 FAM229BQ4G0N7 80 aa7.47□□□□□ -1.21
HDAC4-206ENST00000460235 TEX49A0A1B0GTD5 131 aa7.46□□□□□ -1.22
HDAC4-206ENST00000460235 H3BUT2 72 aa7.46□□□□□ -1.22
HDAC4-206ENST00000460235 TRACP01848 142 aa7.46□□□□□ -1.22
HDAC4-206ENST00000460235 ATXN8Q156A1 80 aa7.46□□□□□ -1.22
HDAC4-206ENST00000460235 SPRR4Q96PI1 79 aa7.46□□□□□ -1.22
HDAC4-206ENST00000460235 APOBP04114 4563 aaKnown RBP7.45□□□□□ -1.22
HDAC4-206ENST00000460235 CRYGAP11844 174 aa7.45□□□□□ -1.22
HDAC4-206ENST00000460235 GAGE2AQ6NT46 116 aa7.45□□□□□ -1.22
HDAC4-206ENST00000460235 TAX1BP3O14907 124 aa7.44□□□□□ -1.22
HDAC4-206ENST00000460235 OXTP01178 125 aa7.44□□□□□ -1.22
HDAC4-206ENST00000460235 Q6ZQY7 126 aa7.44□□□□□ -1.22
HDAC4-206ENST00000460235 LAMTOR3Q9UHA4 124 aa7.44□□□□□ -1.22
HDAC4-206ENST00000460235 ERC2-IT1O76042 136 aa7.43□□□□□ -1.22
HDAC4-206ENST00000460235 A0A1W2PPM0 123 aa7.42□□□□□ -1.22
HDAC4-206ENST00000460235 F8WEM9 126 aa7.42□□□□□ -1.22
HDAC4-206ENST00000460235 LST1O00453 97 aa7.42□□□□□ -1.22
HDAC4-206ENST00000460235 SPRR1BP22528 89 aa7.42□□□□□ -1.22
HDAC4-206ENST00000460235 LINC00483Q53H64 154 aa7.42□□□□□ -1.22
HDAC4-206ENST00000460235 DEFB105AQ8NG35 78 aa7.42□□□□□ -1.22
HDAC4-206ENST00000460235 CLEC2BQ92478 149 aa7.42□□□□□ -1.22
HDAC4-206ENST00000460235 ORMDL1Q9P0S3 153 aa7.42□□□□□ -1.22
HDAC4-206ENST00000460235 IGLV5-48A0A075B6I7 105 aa7.41□□□□□ -1.22
HDAC4-206ENST00000460235 TMEM256-PLSCR3K7ERE1 68 aa7.41□□□□□ -1.22
HDAC4-206ENST00000460235 BIRC6Q9NR09 4857 aa7.41□□□□□ -1.22
HDAC4-206ENST00000460235 HSPG2P98160 4391 aa7.4□□□□□ -1.22
HDAC4-206ENST00000460235 LINC01600Q96MT4 127 aa7.4□□□□□ -1.22
HDAC4-206ENST00000460235 NAA38Q9BRA0 125 aaKnown RBP7.4□□□□□ -1.22
HDAC4-206ENST00000460235 ST20-AS1Q8NBB2 130 aa7.39□□□□□ -1.23
HDAC4-206ENST00000460235 FAM218AQ96MZ4 157 aa7.39□□□□□ -1.23
HDAC4-206ENST00000460235 TCL1BO95988 128 aa7.38□□□□□ -1.23
HDAC4-206ENST00000460235 GTF2H5Q6ZYL4 71 aa7.38□□□□□ -1.23
HDAC4-206ENST00000460235 KIAA1109Q2LD37 5005 aa7.38□□□□□ -1.23
HDAC4-206ENST00000460235 RYR1P21817 5038 aa7.37□□□□□ -1.23
HDAC4-206ENST00000460235 KRTAP1-4P0C5Y4 121 aa7.37□□□□□ -1.23
HDAC4-206ENST00000460235 SSBP3-AS1Q7Z2R9 100 aa7.37□□□□□ -1.23
HDAC4-206ENST00000460235 SPCS1Q9Y6A9 102 aa7.37□□□□□ -1.23
HDAC4-206ENST00000460235 KRTAP29-1A8MX34 341 aaPredicted RBP7.36□□□□□ -1.23
HDAC4-206ENST00000460235 Q8N377 158 aa7.36□□□□□ -1.23
HDAC4-206ENST00000460235 TYMSOSQ8TAI1 123 aa7.36□□□□□ -1.23
HDAC4-206ENST00000460235 KRTAP17-1Q9BYP8 105 aa7.36□□□□□ -1.23
HDAC4-206ENST00000460235 KRTAP4-5Q9BYR2 181 aa7.36□□□□□ -1.23
HDAC4-206ENST00000460235 SRRM2Q9UQ35 2752 aaKnown RBP7.36□□□□□ -1.23
HDAC4-206ENST00000460235 BAALC-AS2P0C853 105 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms