RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 CFC1P0CG37 223 aa10.3□□□□□ -0.76
TRIM39-211ENST00000458516 TMEM238LA0A1B0GVL6 79 aa10.29□□□□□ -0.76
TRIM39-211ENST00000458516 A6NJY4 79 aa10.29□□□□□ -0.76
TRIM39-211ENST00000458516 KRTAP4-16G5E9R7 235 aaPredicted RBP10.29□□□□□ -0.76
TRIM39-211ENST00000458516 CTAG1AP78358 180 aa10.29□□□□□ -0.76
TRIM39-211ENST00000458516 A0A0B4J2C4 111 aa10.28□□□□□ -0.76
TRIM39-211ENST00000458516 FAM19A1Q7Z5A9 133 aa10.28□□□□□ -0.76
TRIM39-211ENST00000458516 KRTAP13-1Q8IUC0 172 aa10.28□□□□□ -0.76
TRIM39-211ENST00000458516 CBY1Q9Y3M2 126 aa10.28□□□□□ -0.76
TRIM39-211ENST00000458516 ZNF73O43830 326 aaPredicted RBP10.27□□□□□ -0.77
TRIM39-211ENST00000458516 RPL13AP40429 203 aaKnown RBP10.27□□□□□ -0.77
TRIM39-211ENST00000458516 PRLHP81277 87 aa10.26□□□□□ -0.77
TRIM39-211ENST00000458516 BVES-AS1Q5T3Y7 98 aa10.26□□□□□ -0.77
TRIM39-211ENST00000458516 ETDCA0A1B0GVM5 59 aa10.25□□□□□ -0.77
TRIM39-211ENST00000458516 ZNF861PO60384 105 aa10.25□□□□□ -0.77
TRIM39-211ENST00000458516 UBE2AP49459 152 aa10.25□□□□□ -0.77
TRIM39-211ENST00000458516 RAB37Q96AX2 223 aa10.25□□□□□ -0.77
TRIM39-211ENST00000458516 NHP2Q9NX24 153 aaKnown RBP10.25□□□□□ -0.77
TRIM39-211ENST00000458516 B5MCH6 92 aa10.24□□□□□ -0.77
TRIM39-211ENST00000458516 RPL28P46779 137 aaKnown RBP10.24□□□□□ -0.77
TRIM39-211ENST00000458516 HINT1P49773 126 aaPredicted RBP10.24□□□□□ -0.77
TRIM39-211ENST00000458516 SMIM11BQ8TCY0 68 aa10.24□□□□□ -0.77
TRIM39-211ENST00000458516 DIRC1Q969H9 104 aa10.24□□□□□ -0.77
TRIM39-211ENST00000458516 ABCA13Q86UQ4 5058 aa10.24□□□□□ -0.77
TRIM39-211ENST00000458516 A0A1B0GWB2 263 aa10.23□□□□□ -0.77
TRIM39-211ENST00000458516 C6orf99Q4VX62 202 aa10.23□□□□□ -0.77
TRIM39-211ENST00000458516 SPINK6Q6UWN8 80 aa10.23□□□□□ -0.77
TRIM39-211ENST00000458516 SRRM2Q9UQ35 2752 aaKnown RBP10.22□□□□□ -0.77
TRIM39-211ENST00000458516 H0Y9J4 135 aa10.22□□□□□ -0.77
TRIM39-211ENST00000458516 M0R143 59 aa10.22□□□□□ -0.77
TRIM39-211ENST00000458516 K7ERJ3 54 aa10.21□□□□□ -0.77
TRIM39-211ENST00000458516 Q6ZRX8 168 aa10.21□□□□□ -0.77
TRIM39-211ENST00000458516 PRO1854Q9UHT4 67 aa10.21□□□□□ -0.77
TRIM39-211ENST00000458516 INAFM2P0DMQ5 153 aa10.2□□□□□ -0.78
TRIM39-211ENST00000458516 H7C2G1 150 aa10.19□□□□□ -0.78
TRIM39-211ENST00000458516 ELOF1P60002 83 aaKnown RBP10.19□□□□□ -0.78
TRIM39-211ENST00000458516 TRBV7-6A0A0J9YX20 115 aa10.18□□□□□ -0.78
TRIM39-211ENST00000458516 SMCR5Q8TEV8 140 aa10.18□□□□□ -0.78
TRIM39-211ENST00000458516 Q9BRP9 147 aa10.18□□□□□ -0.78
TRIM39-211ENST00000458516 HIGD2AQ9BW72 106 aa10.18□□□□□ -0.78
TRIM39-211ENST00000458516 COX7BP24311 80 aa10.17□□□□□ -0.78
TRIM39-211ENST00000458516 FLG2Q5D862 2391 aaPredicted RBP10.16□□□□□ -0.78
TRIM39-211ENST00000458516 Q1RN00 199 aa10.15□□□□□ -0.78
TRIM39-211ENST00000458516 FAT3Q8TDW7 4589 aa10.13□□□□□ -0.79
TRIM39-211ENST00000458516 ERC2-IT1O76042 136 aa10.13□□□□□ -0.79
TRIM39-211ENST00000458516 TSPAN13O95857 204 aa10.13□□□□□ -0.79
TRIM39-211ENST00000458516 BATFQ16520 125 aa10.12□□□□□ -0.79
TRIM39-211ENST00000458516 KRTAP1-4P0C5Y4 121 aa10.11□□□□□ -0.79
TRIM39-211ENST00000458516 VAMP3Q15836 100 aa10.11□□□□□ -0.79
TRIM39-211ENST00000458516 DHRS4-AS1Q9P1J3 65 aa10.11□□□□□ -0.79
TRIM39-211ENST00000458516 TRIAP1O43715 76 aa10.1□□□□□ -0.79
TRIM39-211ENST00000458516 LRP1Q07954 4544 aaKnown RBP10.09□□□□□ -0.79
TRIM39-211ENST00000458516 PCP4L1A6NKN8 68 aa10.08□□□□□ -0.8
TRIM39-211ENST00000458516 SPRR4Q96PI1 79 aa10.08□□□□□ -0.8
TRIM39-211ENST00000458516 LINC00575Q6W349 94 aa10.07□□□□□ -0.8
TRIM39-211ENST00000458516 SNHG12Q9BXW3 62 aa10.07□□□□□ -0.8
TRIM39-211ENST00000458516 MYCBP2O75592 4640 aa10.06□□□□□ -0.8
TRIM39-211ENST00000458516 ST20-AS1Q8NBB2 130 aa10.06□□□□□ -0.8
TRIM39-211ENST00000458516 ZNF706Q9Y5V0 76 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-211ENST00000458516 H0YGX0 51 aa10.05□□□□□ -0.8
TRIM39-211ENST00000458516 PSMB2P49721 201 aa10.05□□□□□ -0.8
TRIM39-211ENST00000458516 FAM218AQ96MZ4 157 aa10.04□□□□□ -0.8
TRIM39-211ENST00000458516 ANAPC11Q9NYG5 84 aa10.04□□□□□ -0.8
TRIM39-211ENST00000458516 SLC25A20O43772 301 aa10.03□□□□□ -0.8
TRIM39-211ENST00000458516 LINC01600Q96MT4 127 aa10.03□□□□□ -0.8
TRIM39-211ENST00000458516 hADV29S1A0JD25 119 aa10.02□□□□□ -0.81
TRIM39-211ENST00000458516 OXTP01178 125 aa10.02□□□□□ -0.81
TRIM39-211ENST00000458516 LINC00483Q53H64 154 aa10.02□□□□□ -0.81
TRIM39-211ENST00000458516 NAA38Q9BRA0 125 aaKnown RBP10.02□□□□□ -0.81
TRIM39-211ENST00000458516 KRTAP29-1A8MX34 341 aaPredicted RBP10.01□□□□□ -0.81
TRIM39-211ENST00000458516 COX6CP09669 75 aa10.01□□□□□ -0.81
TRIM39-211ENST00000458516 GAGE2AQ6NT46 116 aa10.01□□□□□ -0.81
TRIM39-211ENST00000458516 CLEC2BQ92478 149 aa10.01□□□□□ -0.81
TRIM39-211ENST00000458516 TNXBP22105 4242 aa10□□□□□ -0.81
TRIM39-211ENST00000458516 A0A087X002 238 aa10□□□□□ -0.81
TRIM39-211ENST00000458516 TAX1BP3O14907 124 aa10□□□□□ -0.81
TRIM39-211ENST00000458516 FAM229BQ4G0N7 80 aa10□□□□□ -0.81
TRIM39-211ENST00000458516 LINC01547P58512 204 aaPredicted RBP9.99□□□□□ -0.81
TRIM39-211ENST00000458516 PRR26Q8N8Z3 221 aa9.99□□□□□ -0.81
TRIM39-211ENST00000458516 IGLV5-48A0A075B6I7 105 aa9.98□□□□□ -0.81
TRIM39-211ENST00000458516 A0A1B0GX51 115 aa9.98□□□□□ -0.81
TRIM39-211ENST00000458516 SPRR1BP22528 89 aa9.98□□□□□ -0.81
TRIM39-211ENST00000458516 Q6ZQY7 126 aa9.98□□□□□ -0.81
TRIM39-211ENST00000458516 MT1HL1P0DM35 61 aa9.97□□□□□ -0.81
TRIM39-211ENST00000458516 CRYGAP11844 174 aa9.97□□□□□ -0.81
TRIM39-211ENST00000458516 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.97□□□□□ -0.81
TRIM39-211ENST00000458516 SCGB1C2P0DMR2 95 aa9.96□□□□□ -0.82
TRIM39-211ENST00000458516 KRTAP13-2Q52LG2 175 aa9.96□□□□□ -0.82
TRIM39-211ENST00000458516 DEFB105AQ8NG35 78 aa9.96□□□□□ -0.82
TRIM39-211ENST00000458516 C9orf118A6NHY6 69 aa9.95□□□□□ -0.82
TRIM39-211ENST00000458516 H3BUT2 72 aa9.95□□□□□ -0.82
TRIM39-211ENST00000458516 KRTAP10-8P60410 259 aa9.95□□□□□ -0.82
TRIM39-211ENST00000458516 COL5A1-AS1Q5SY13 56 aa9.95□□□□□ -0.82
TRIM39-211ENST00000458516 UBR4Q5T4S7 5183 aa9.95□□□□□ -0.82
TRIM39-211ENST00000458516 TEX49A0A1B0GTD5 131 aa9.94□□□□□ -0.82
TRIM39-211ENST00000458516 Q8N377 158 aa9.94□□□□□ -0.82
TRIM39-211ENST00000458516 C3orf22Q8N5N4 141 aa9.94□□□□□ -0.82
TRIM39-211ENST00000458516 SNCGO76070 127 aa9.93□□□□□ -0.82
TRIM39-211ENST00000458516 LST1O00453 97 aa9.92□□□□□ -0.82
TRIM39-211ENST00000458516 SMIM29Q86T20 159 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms