RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 CYP4F30PQ9H0H9 118 aa12.73□□□□□ -0.37
SNX27-204ENST00000458013 PSORS1C2Q9UIG4 136 aa12.72□□□□□ -0.37
SNX27-204ENST00000458013 ZNF575Q86XF7 245 aa12.71□□□□□ -0.38
SNX27-204ENST00000458013 LRRK2Q5S007 2527 aa12.7□□□□□ -0.38
SNX27-204ENST00000458013 H7BZZ5 65 aa12.69□□□□□ -0.38
SNX27-204ENST00000458013 PRR34Q9NV39 138 aa12.69□□□□□ -0.38
SNX27-204ENST00000458013 IGLV7-43P04211 117 aa12.69□□□□□ -0.38
SNX27-204ENST00000458013 C19orf73Q9NVV2 129 aa12.68□□□□□ -0.38
SNX27-204ENST00000458013 FN1P02751 2386 aaKnown RBP12.63□□□□□ -0.39
SNX27-204ENST00000458013 A0A1W2PNM2 257 aa12.63□□□□□ -0.39
SNX27-204ENST00000458013 KLKP1Q107X0 134 aa12.62□□□□□ -0.39
SNX27-204ENST00000458013 SPRR4Q96PI1 79 aa12.6□□□□□ -0.39
SNX27-204ENST00000458013 FAM104AQ969W3 186 aa12.6□□□□□ -0.39
SNX27-204ENST00000458013 RBM12B-AS1Q9P1G2 102 aa12.6□□□□□ -0.39
SNX27-204ENST00000458013 KLK9Q2XQG4 91 aa12.59□□□□□ -0.39
SNX27-204ENST00000458013 DOPEY1Q5JWR5 2465 aa12.58□□□□□ -0.4
SNX27-204ENST00000458013 CDC42SE1Q9NRR8 79 aa12.58□□□□□ -0.4
SNX27-204ENST00000458013 KTN1-AS1Q86SY8 53 aa12.57□□□□□ -0.4
SNX27-204ENST00000458013 C9orf163Q8N9P6 203 aa12.56□□□□□ -0.4
SNX27-204ENST00000458013 MYO18BQ8IUG5 2567 aa12.54□□□□□ -0.4
SNX27-204ENST00000458013 TLX1NBP0CAT3 122 aa12.54□□□□□ -0.4
SNX27-204ENST00000458013 PLA2G2DQ9UNK4 145 aa12.52□□□□□ -0.4
SNX27-204ENST00000458013 A0A096LNT2 108 aa12.52□□□□□ -0.41
SNX27-204ENST00000458013 PRR26Q8N8Z3 221 aa12.5□□□□□ -0.41
SNX27-204ENST00000458013 JMJD1CQ15652 2540 aa12.49□□□□□ -0.41
SNX27-204ENST00000458013 LINC00612Q8N6U2 182 aa12.48□□□□□ -0.41
SNX27-204ENST00000458013 LCA10Q71F78 164 aa12.47□□□□□ -0.41
SNX27-204ENST00000458013 UTRNP46939 3433 aa12.47□□□□□ -0.41
SNX27-204ENST00000458013 ABCA12Q86UK0 2595 aa12.46□□□□□ -0.41
SNX27-204ENST00000458013 CD164Q04900 197 aa12.45□□□□□ -0.42
SNX27-204ENST00000458013 TNP2Q05952 138 aa12.43□□□□□ -0.42
SNX27-204ENST00000458013 TLN1Q9Y490 2541 aaKnown RBP12.4□□□□□ -0.42
SNX27-204ENST00000458013 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.4□□□□□ -0.42
SNX27-204ENST00000458013 DNAH12Q6ZR08 3092 aa12.39□□□□□ -0.43
SNX27-204ENST00000458013 MYO9AB2RTY4 2548 aa12.39□□□□□ -0.43
SNX27-204ENST00000458013 FAM229BQ4G0N7 80 aa12.38□□□□□ -0.43
SNX27-204ENST00000458013 CNBPP62633 177 aaKnown RBP12.38□□□□□ -0.43
SNX27-204ENST00000458013 Q6ZSA8 131 aa12.37□□□□□ -0.43
SNX27-204ENST00000458013 KRTAP1-3Q8IUG1 177 aa12.36□□□□□ -0.43
SNX27-204ENST00000458013 M0R2T5 61 aa12.35□□□□□ -0.43
SNX27-204ENST00000458013 WIPF1O43516 503 aa12.33□□□□□ -0.44
SNX27-204ENST00000458013 SPANXA2-OT1Q8N9U9 137 aa12.32□□□□□ -0.44
SNX27-204ENST00000458013 ANKRD17O75179 2603 aaKnown RBP12.31□□□□□ -0.44
SNX27-204ENST00000458013 HRES1P13985 223 aa12.31□□□□□ -0.44
SNX27-204ENST00000458013 CAMK2N1Q7Z7J9 78 aa12.3□□□□□ -0.44
SNX27-204ENST00000458013 TLN2Q9Y4G6 2542 aa12.3□□□□□ -0.44
SNX27-204ENST00000458013 OCR1Q9BZK8 76 aa12.29□□□□□ -0.44
SNX27-204ENST00000458013 IGLV7-46A0A075B6I9 117 aa12.28□□□□□ -0.44
SNX27-204ENST00000458013 ZFYVE26Q68DK2 2539 aa12.28□□□□□ -0.44
SNX27-204ENST00000458013 PRAC1Q96KF2 57 aa12.27□□□□□ -0.45
SNX27-204ENST00000458013 LUZP6Q538Z0 58 aa12.26□□□□□ -0.45
SNX27-204ENST00000458013 KRTAP1-1Q07627 177 aa12.25□□□□□ -0.45
SNX27-204ENST00000458013 A0A1B0GU33 70 aa12.24□□□□□ -0.45
SNX27-204ENST00000458013 Q1T7F1 81 aa12.23□□□□□ -0.45
SNX27-204ENST00000458013 Q8N9P0 234 aaPredicted RBP12.22□□□□□ -0.45
SNX27-204ENST00000458013 CR1P17927 2039 aa12.21□□□□□ -0.46
SNX27-204ENST00000458013 SETD2Q9BYW2 2564 aaPredicted RBP12.2□□□□□ -0.46
SNX27-204ENST00000458013 Q8NDZ9 215 aa12.2□□□□□ -0.46
SNX27-204ENST00000458013 CYSTM1Q9H1C7 97 aa12.18□□□□□ -0.46
SNX27-204ENST00000458013 ZNF462Q96JM2 2506 aa12.18□□□□□ -0.46
SNX27-204ENST00000458013 USP9XQ93008 2570 aaPredicted RBP12.18□□□□□ -0.46
SNX27-204ENST00000458013 C5orf42Q9H799 3197 aa12.17□□□□□ -0.46
SNX27-204ENST00000458013 S4R3F8 94 aa12.16□□□□□ -0.46
SNX27-204ENST00000458013 ANKRD11Q6UB99 2663 aaPredicted RBP12.12□□□□□ -0.47
SNX27-204ENST00000458013 POLQO75417 2590 aa12.11□□□□□ -0.47
SNX27-204ENST00000458013 LINC00483Q53H64 154 aa12.11□□□□□ -0.47
SNX27-204ENST00000458013 MMP24-AS1A0A0U1RRL7 71 aa12.1□□□□□ -0.47
SNX27-204ENST00000458013 Q75L30 129 aa12.08□□□□□ -0.48
SNX27-204ENST00000458013 ZCCHC13Q8WW36 166 aaKnown RBP12.06□□□□□ -0.48
SNX27-204ENST00000458013 PKD1L2Q7Z442 2459 aa12.05□□□□□ -0.48
SNX27-204ENST00000458013 Q5XG85 94 aa12.05□□□□□ -0.48
SNX27-204ENST00000458013 CSAG1Q6PB30 78 aa12.05□□□□□ -0.48
SNX27-204ENST00000458013 SPINK7P58062 85 aa12.03□□□□□ -0.48
SNX27-204ENST00000458013 Q5W150 140 aa12.01□□□□□ -0.49
SNX27-204ENST00000458013 ACANP16112 2415 aa11.99□□□□□ -0.49
SNX27-204ENST00000458013 PIEZO1Q92508 2521 aa11.98□□□□□ -0.49
SNX27-204ENST00000458013 FP248Q71RG6 208 aaPredicted RBP11.95□□□□□ -0.5
SNX27-204ENST00000458013 H3BS24 57 aa11.94□□□□□ -0.5
SNX27-204ENST00000458013 CEP295Q9C0D2 2601 aa11.94□□□□□ -0.5
SNX27-204ENST00000458013 Q5VV11 94 aa11.94□□□□□ -0.5
SNX27-204ENST00000458013 LINC01558Q9Y6Z2 57 aa11.93□□□□□ -0.5
SNX27-204ENST00000458013 SPTBN4Q9H254 2564 aa11.92□□□□□ -0.5
SNX27-204ENST00000458013 PLAC8Q9NZF1 115 aa11.92□□□□□ -0.5
SNX27-204ENST00000458013 MTORP42345 2549 aa11.92□□□□□ -0.5
SNX27-204ENST00000458013 DMAC1Q96GE9 116 aa11.91□□□□□ -0.5
SNX27-204ENST00000458013 CHD8Q9HCK8 2581 aa11.91□□□□□ -0.5
SNX27-204ENST00000458013 USP9YO00507 2555 aaPredicted RBP11.91□□□□□ -0.5
SNX27-204ENST00000458013 PCNTO95613 3336 aa11.89□□□□□ -0.51
SNX27-204ENST00000458013 KRTAP1-5Q9BYS1 174 aa11.86□□□□□ -0.51
SNX27-204ENST00000458013 R4GN34 69 aa11.86□□□□□ -0.51
SNX27-204ENST00000458013 Q5VSD8 79 aa11.83□□□□□ -0.52
SNX27-204ENST00000458013 LINC00472Q9H8W2 130 aa11.81□□□□□ -0.52
SNX27-204ENST00000458013 SPATA8Q6RVD6 105 aa11.8□□□□□ -0.52
SNX27-204ENST00000458013 FASNP49327 2511 aaKnown RBP11.8□□□□□ -0.52
SNX27-204ENST00000458013 KRTAP10-2P60368 255 aa11.79□□□□□ -0.52
SNX27-204ENST00000458013 F8P00451 2351 aa11.79□□□□□ -0.52
SNX27-204ENST00000458013 KRTAP26-1Q6PEX3 210 aa11.79□□□□□ -0.52
SNX27-204ENST00000458013 BPTFQ12830 3046 aa11.77□□□□□ -0.52
SNX27-204ENST00000458013 SPRR1AP35321 89 aa11.77□□□□□ -0.52
SNX27-204ENST00000458013 CEP350Q5VT06 3117 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms