RNA–Protein interactions for RNA: ENST00000457566.1

RFX3-AS1-203, RFX3 antisense RNA 1, humanhuman

TSL 3

Gene RFX3-AS1, Length 496 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-203ENST00000457566 UBE2D3P61077 147 aa1.64□□□□□ -2.15
RFX3-AS1-203ENST00000457566 UBE2D2P62837 147 aa1.64□□□□□ -2.15
RFX3-AS1-203ENST00000457566 FAM213BQ8TBF2 198 aa1.64□□□□□ -2.15
RFX3-AS1-203ENST00000457566 TSLPQ969D9 159 aa1.64□□□□□ -2.15
RFX3-AS1-203ENST00000457566 PMCHL2Q9BQD1 86 aa1.64□□□□□ -2.15
RFX3-AS1-203ENST00000457566 DYNLRB1Q9NP97 96 aa1.64□□□□□ -2.15
RFX3-AS1-203ENST00000457566 NDUFA4L2Q9NRX3 87 aa1.64□□□□□ -2.15
RFX3-AS1-203ENST00000457566 TRBV7-7A0A0K0K1E9 115 aa1.63□□□□□ -2.15
RFX3-AS1-203ENST00000457566 LOC285095A0A1B0GVY8 99 aa1.63□□□□□ -2.15
RFX3-AS1-203ENST00000457566 KRTAP12-4P60329 112 aa1.63□□□□□ -2.15
RFX3-AS1-203ENST00000457566 SEC11AP67812 179 aa1.63□□□□□ -2.15
RFX3-AS1-203ENST00000457566 Q5VV11 94 aa1.63□□□□□ -2.15
RFX3-AS1-203ENST00000457566 UQCR10Q9UDW1 63 aa1.63□□□□□ -2.15
RFX3-AS1-203ENST00000457566 PI4KAP42356 2102 aa1.63□□□□□ -2.15
RFX3-AS1-203ENST00000457566 CRYM-AS1A6NIL9 109 aa1.62□□□□□ -2.15
RFX3-AS1-203ENST00000457566 CCL18P55774 89 aa1.62□□□□□ -2.15
RFX3-AS1-203ENST00000457566 AMELXQ99217 191 aa1.62□□□□□ -2.15
RFX3-AS1-203ENST00000457566 CDC42SE2Q9NRR3 84 aa1.62□□□□□ -2.15
RFX3-AS1-203ENST00000457566 PRO1854Q9UHT4 67 aa1.62□□□□□ -2.15
RFX3-AS1-203ENST00000457566 R4GMQ9 66 aa1.62□□□□□ -2.15
RFX3-AS1-203ENST00000457566 HMCN2Q8NDA2 5059 aa1.62□□□□□ -2.15
RFX3-AS1-203ENST00000457566 ABCA1O95477 2261 aa1.61□□□□□ -2.15
RFX3-AS1-203ENST00000457566 A0A096LNT2 108 aa1.61□□□□□ -2.15
RFX3-AS1-203ENST00000457566 A0A1W2PPM0 123 aa1.61□□□□□ -2.15
RFX3-AS1-203ENST00000457566 SFT2D2O95562 160 aa1.61□□□□□ -2.15
RFX3-AS1-203ENST00000457566 PPP1R17O96001 155 aa1.61□□□□□ -2.15
RFX3-AS1-203ENST00000457566 GYPAP02724 150 aa1.61□□□□□ -2.15
RFX3-AS1-203ENST00000457566 COX6CP09669 75 aa1.61□□□□□ -2.15
RFX3-AS1-203ENST00000457566 SPINK13Q1W4C9 94 aa1.61□□□□□ -2.15
RFX3-AS1-203ENST00000457566 DEFB124Q8NES8 71 aa1.61□□□□□ -2.15
RFX3-AS1-203ENST00000457566 TRGV9Q99603 122 aa1.61□□□□□ -2.15
RFX3-AS1-203ENST00000457566 SMR3AQ99954 134 aa1.61□□□□□ -2.15
RFX3-AS1-203ENST00000457566 WFDC6Q9BQY6 131 aa1.61□□□□□ -2.15
RFX3-AS1-203ENST00000457566 FRAS1Q86XX4 4008 aa1.6□□□□□ -2.15
RFX3-AS1-203ENST00000457566 CSMD3Q7Z407 3707 aa1.6□□□□□ -2.15
RFX3-AS1-203ENST00000457566 HECTD4Q9Y4D8 3996 aa1.6□□□□□ -2.15
RFX3-AS1-203ENST00000457566 TRAV22A0A0B4J277 110 aa1.6□□□□□ -2.15
RFX3-AS1-203ENST00000457566 KRTAP12-3P60328 96 aa1.6□□□□□ -2.15
RFX3-AS1-203ENST00000457566 SPAG11BQ08648 103 aa1.6□□□□□ -2.15
RFX3-AS1-203ENST00000457566 SPAG11AQ6PDA7 123 aa1.6□□□□□ -2.15
RFX3-AS1-203ENST00000457566 PLXNB2O15031 1838 aa1.6□□□□□ -2.15
RFX3-AS1-203ENST00000457566 KNL1Q8NG31 2342 aa1.6□□□□□ -2.15
RFX3-AS1-203ENST00000457566 HMGN4O00479 90 aa1.59□□□□□ -2.15
RFX3-AS1-203ENST00000457566 BAGE3Q86Y29 109 aa1.59□□□□□ -2.15
RFX3-AS1-203ENST00000457566 Q8N6K4 173 aa1.59□□□□□ -2.15
RFX3-AS1-203ENST00000457566 SERP2Q8N6R1 65 aa1.59□□□□□ -2.15
RFX3-AS1-203ENST00000457566 Q96NJ1 140 aa1.59□□□□□ -2.15
RFX3-AS1-203ENST00000457566 NPVFQ9HCQ7 196 aa1.59□□□□□ -2.15
RFX3-AS1-203ENST00000457566 MANBALQ9NQG1 85 aa1.59□□□□□ -2.15
RFX3-AS1-203ENST00000457566 FAIMQ9NVQ4 179 aa1.59□□□□□ -2.15
RFX3-AS1-203ENST00000457566 V9GYH0 126 aa1.59□□□□□ -2.15
RFX3-AS1-203ENST00000457566 SORL1Q92673 2214 aa1.59□□□□□ -2.16
RFX3-AS1-203ENST00000457566 MACF1Q9UPN3 7388 aaKnown RBP1.59□□□□□ -2.16
RFX3-AS1-203ENST00000457566 DOCK11Q5JSL3 2073 aa1.59□□□□□ -2.16
RFX3-AS1-203ENST00000457566 CHKB-CPT1BH3BT56 60 aa1.58□□□□□ -2.16
RFX3-AS1-203ENST00000457566 ANGP03950 147 aaKnown RBP1.58□□□□□ -2.16
RFX3-AS1-203ENST00000457566 LYNX1P0DP58 116 aa1.58□□□□□ -2.16
RFX3-AS1-203ENST00000457566 LCN9Q8WX39 176 aa1.58□□□□□ -2.16
RFX3-AS1-203ENST00000457566 CACFD1Q9UGQ2 172 aa1.58□□□□□ -2.16
RFX3-AS1-203ENST00000457566 NCOA6Q14686 2063 aaPredicted RBP1.58□□□□□ -2.16
RFX3-AS1-203ENST00000457566 NFAT5O94916 1531 aa1.57□□□□□ -2.16
RFX3-AS1-203ENST00000457566 CMYA5Q8N3K9 4069 aa1.57□□□□□ -2.16
RFX3-AS1-203ENST00000457566 CACNA1CQ13936 2221 aa1.57□□□□□ -2.16
RFX3-AS1-203ENST00000457566 VMO1Q7Z5L0 202 aa1.57□□□□□ -2.16
RFX3-AS1-203ENST00000457566 KMT2AQ03164 3969 aa1.57□□□□□ -2.16
RFX3-AS1-203ENST00000457566 TMEM14DPA8MWL7 114 aa1.56□□□□□ -2.16
RFX3-AS1-203ENST00000457566 PYY3Q5JQD4 70 aa1.56□□□□□ -2.16
RFX3-AS1-203ENST00000457566 KNTC1P50748 2209 aa1.56□□□□□ -2.16
RFX3-AS1-203ENST00000457566 SYS1-DBNDD2H3BUS1 97 aa1.55□□□□□ -2.16
RFX3-AS1-203ENST00000457566 H7BZZ5 65 aa1.55□□□□□ -2.16
RFX3-AS1-203ENST00000457566 TMEM170BQ5T4T1 132 aa1.55□□□□□ -2.16
RFX3-AS1-203ENST00000457566 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.55□□□□□ -2.16
RFX3-AS1-203ENST00000457566 PLAC4Q8WY50 150 aa1.55□□□□□ -2.16
RFX3-AS1-203ENST00000457566 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
RFX3-AS1-203ENST00000457566 TRGV1A0A0A0MS02 117 aa1.54□□□□□ -2.16
RFX3-AS1-203ENST00000457566 F8VRH5 84 aa1.54□□□□□ -2.16
RFX3-AS1-203ENST00000457566 K7EIL1 84 aa1.54□□□□□ -2.16
RFX3-AS1-203ENST00000457566 APOC3P02656 99 aa1.54□□□□□ -2.16
RFX3-AS1-203ENST00000457566 TRAPPC2P0DI81 140 aa1.54□□□□□ -2.16
RFX3-AS1-203ENST00000457566 TRAPPC2BP0DI82 140 aa1.54□□□□□ -2.16
RFX3-AS1-203ENST00000457566 RPL37P61927 97 aaKnown RBP1.54□□□□□ -2.16
RFX3-AS1-203ENST00000457566 LINC01558Q9Y6Z2 57 aa1.54□□□□□ -2.16
RFX3-AS1-203ENST00000457566 SRRM2Q9UQ35 2752 aaKnown RBP1.54□□□□□ -2.16
RFX3-AS1-203ENST00000457566 IGLC7A0M8Q6 106 aa1.53□□□□□ -2.16
RFX3-AS1-203ENST00000457566 K7EP34 96 aa1.53□□□□□ -2.16
RFX3-AS1-203ENST00000457566 M0R135 149 aa1.53□□□□□ -2.16
RFX3-AS1-203ENST00000457566 UQCR11O14957 56 aa1.53□□□□□ -2.16
RFX3-AS1-203ENST00000457566 ARL14EPLP0DKL9 152 aa1.53□□□□□ -2.16
RFX3-AS1-203ENST00000457566 ACYP2P14621 99 aa1.53□□□□□ -2.16
RFX3-AS1-203ENST00000457566 FAUP35544 74 aaKnown RBP1.53□□□□□ -2.16
RFX3-AS1-203ENST00000457566 BAGE2Q86Y30 109 aa1.53□□□□□ -2.16
RFX3-AS1-203ENST00000457566 BPESC1Q9GZL8 116 aa1.53□□□□□ -2.16
RFX3-AS1-203ENST00000457566 TRBV25-1A0A075B6N4 114 aa1.52□□□□□ -2.17
RFX3-AS1-203ENST00000457566 TRAV1-2A0A0B4J238 106 aa1.52□□□□□ -2.17
RFX3-AS1-203ENST00000457566 SAA2P0DJI9 122 aaPredicted RBP1.52□□□□□ -2.17
RFX3-AS1-203ENST00000457566 FXYD6P3P58550 94 aa1.52□□□□□ -2.17
RFX3-AS1-203ENST00000457566 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
RFX3-AS1-203ENST00000457566 Q6ZSA8 131 aa1.52□□□□□ -2.17
RFX3-AS1-203ENST00000457566 SMIM11BQ8TCY0 68 aa1.52□□□□□ -2.17
RFX3-AS1-203ENST00000457566 SMIM4Q8WVI0 70 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms