RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 SPTSSBQ8NFR3 76 aa4.66□□□□□ -1.66
CUBNP3-201ENST00000457461 WFDC10AQ9H1F0 79 aa4.66□□□□□ -1.66
CUBNP3-201ENST00000457461 SPANXA2-OT1Q8N9U9 137 aa4.65□□□□□ -1.66
CUBNP3-201ENST00000457461 SCXQ7RTU7 201 aa4.65□□□□□ -1.67
CUBNP3-201ENST00000457461 CSNK1G2-AS1Q8NCQ2 148 aa4.65□□□□□ -1.67
CUBNP3-201ENST00000457461 TRBV10-1A0A0K0K1A3 114 aa4.64□□□□□ -1.67
CUBNP3-201ENST00000457461 LECT2O14960 151 aa4.64□□□□□ -1.67
CUBNP3-201ENST00000457461 SMIM11BQ8TCY0 68 aa4.64□□□□□ -1.67
CUBNP3-201ENST00000457461 PKD1L1Q8TDX9 2849 aa4.64□□□□□ -1.67
CUBNP3-201ENST00000457461 IGHV6-1A0A0B4J1U7 121 aa4.63□□□□□ -1.67
CUBNP3-201ENST00000457461 EGFEM1PQ0D2K5 195 aa4.63□□□□□ -1.67
CUBNP3-201ENST00000457461 MOBPQ13875 183 aa4.63□□□□□ -1.67
CUBNP3-201ENST00000457461 A0A0A0MQY5 61 aa4.63□□□□□ -1.67
CUBNP3-201ENST00000457461 HAMPP81172 84 aa4.63□□□□□ -1.67
CUBNP3-201ENST00000457461 SUMO4Q6EEV6 95 aa4.63□□□□□ -1.67
CUBNP3-201ENST00000457461 CELA1Q9UNI1 258 aa4.63□□□□□ -1.67
CUBNP3-201ENST00000457461 IGHV3-64A0A075B6Q5 118 aa4.62□□□□□ -1.67
CUBNP3-201ENST00000457461 MGPP08493 103 aa4.62□□□□□ -1.67
CUBNP3-201ENST00000457461 RPL36AP83881 106 aaKnown RBP4.62□□□□□ -1.67
CUBNP3-201ENST00000457461 C6orf99Q4VX62 202 aa4.62□□□□□ -1.67
CUBNP3-201ENST00000457461 Q8N814 137 aa4.62□□□□□ -1.67
CUBNP3-201ENST00000457461 RPL36ALQ969Q0 106 aaKnown RBP4.62□□□□□ -1.67
CUBNP3-201ENST00000457461 A6NED7 52 aa4.61□□□□□ -1.67
CUBNP3-201ENST00000457461 M0QY20 66 aa4.61□□□□□ -1.67
CUBNP3-201ENST00000457461 CASC2Q6XLA1 102 aa4.61□□□□□ -1.67
CUBNP3-201ENST00000457461 FAM104AQ969W3 186 aa4.61□□□□□ -1.67
CUBNP3-201ENST00000457461 IGKV2-28A0A075B6P5 120 aa4.6□□□□□ -1.67
CUBNP3-201ENST00000457461 IGHV3-38A0A0C4DH36 116 aa4.6□□□□□ -1.67
CUBNP3-201ENST00000457461 IGKV2D-28P01615 120 aa4.6□□□□□ -1.67
CUBNP3-201ENST00000457461 NTM-AS1Q6ZSK4 140 aa4.6□□□□□ -1.67
CUBNP3-201ENST00000457461 A8MU10 97 aa4.6□□□□□ -1.67
CUBNP3-201ENST00000457461 C16orf74Q96GX8 76 aa4.6□□□□□ -1.67
CUBNP3-201ENST00000457461 HIGD2AQ9BW72 106 aa4.6□□□□□ -1.67
CUBNP3-201ENST00000457461 H3BPC8 53 aa4.59□□□□□ -1.67
CUBNP3-201ENST00000457461 HTN1P15515 57 aa4.59□□□□□ -1.67
CUBNP3-201ENST00000457461 KRTAP10-11P60412 298 aa4.59□□□□□ -1.67
CUBNP3-201ENST00000457461 SND1-IT1Q9HBX3 110 aa4.59□□□□□ -1.67
CUBNP3-201ENST00000457461 PLAC8Q9NZF1 115 aa4.59□□□□□ -1.67
CUBNP3-201ENST00000457461 NBEAL1Q6ZS30 2694 aa4.58□□□□□ -1.68
CUBNP3-201ENST00000457461 CNBPP62633 177 aaKnown RBP4.58□□□□□ -1.68
CUBNP3-201ENST00000457461 LINC00612Q8N6U2 182 aa4.58□□□□□ -1.68
CUBNP3-201ENST00000457461 NOTCH1P46531 2555 aa4.58□□□□□ -1.68
CUBNP3-201ENST00000457461 IGHV3OR16-12A0A075B7B8 117 aa4.58□□□□□ -1.68
CUBNP3-201ENST00000457461 IGHV4-30-4P0DP06 118 aa4.58□□□□□ -1.68
CUBNP3-201ENST00000457461 B9D2Q9BPU9 175 aa4.58□□□□□ -1.68
CUBNP3-201ENST00000457461 PRR15LQ9BU68 103 aa4.58□□□□□ -1.68
CUBNP3-201ENST00000457461 FAM30AQ9NZY2 134 aa4.58□□□□□ -1.68
CUBNP3-201ENST00000457461 NBEAL2Q6ZNJ1 2754 aa4.57□□□□□ -1.68
CUBNP3-201ENST00000457461 MGAM2Q2M2H8 2515 aa4.57□□□□□ -1.68
CUBNP3-201ENST00000457461 TRBV6-4A0A1B0GX49 114 aa4.57□□□□□ -1.68
CUBNP3-201ENST00000457461 IGHV3-53P01767 116 aa4.57□□□□□ -1.68
CUBNP3-201ENST00000457461 IGKV4-1P06312 121 aa4.57□□□□□ -1.68
CUBNP3-201ENST00000457461 Q6ZTI0 123 aa4.57□□□□□ -1.68
CUBNP3-201ENST00000457461 LINC01558Q9Y6Z2 57 aa4.57□□□□□ -1.68
CUBNP3-201ENST00000457461 LINC00208Q96KT6 92 aa4.56□□□□□ -1.68
CUBNP3-201ENST00000457461 NOP10Q9NPE3 64 aaKnown RBP4.56□□□□□ -1.68
CUBNP3-201ENST00000457461 CDKN2A-AS1Q9UH64 79 aa4.56□□□□□ -1.68
CUBNP3-201ENST00000457461 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.55□□□□□ -1.68
CUBNP3-201ENST00000457461 TRGV1A0A0A0MS02 117 aa4.55□□□□□ -1.68
CUBNP3-201ENST00000457461 KPRPQ5T749 579 aaPredicted RBP4.55□□□□□ -1.68
CUBNP3-201ENST00000457461 Q6ZSN1 163 aa4.55□□□□□ -1.68
CUBNP3-201ENST00000457461 HUWE1Q7Z6Z7 4374 aaKnown RBP4.55□□□□□ -1.68
CUBNP3-201ENST00000457461 IGHV3-73A0A0B4J1V6 119 aa4.55□□□□□ -1.68
CUBNP3-201ENST00000457461 SMIM1B2RUZ4 78 aa4.55□□□□□ -1.68
CUBNP3-201ENST00000457461 F5H697 171 aa4.55□□□□□ -1.68
CUBNP3-201ENST00000457461 DEFB135Q30KP9 77 aa4.55□□□□□ -1.68
CUBNP3-201ENST00000457461 Q8NAQ8 132 aa4.55□□□□□ -1.68
CUBNP3-201ENST00000457461 XAGE1AQ9HD64 81 aa4.55□□□□□ -1.68
CUBNP3-201ENST00000457461 ETDCA0A1B0GVM5 59 aa4.54□□□□□ -1.68
CUBNP3-201ENST00000457461 LRCOL1A6NCL2 159 aa4.54□□□□□ -1.68
CUBNP3-201ENST00000457461 MUC7Q8TAX7 377 aa4.53□□□□□ -1.68
CUBNP3-201ENST00000457461 RETNLBQ9BQ08 111 aa4.53□□□□□ -1.68
CUBNP3-201ENST00000457461 KCNQ1DNQ9H478 68 aa4.53□□□□□ -1.68
CUBNP3-201ENST00000457461 DNAH9Q9NYC9 4486 aa4.53□□□□□ -1.68
CUBNP3-201ENST00000457461 TENM3Q9P273 2699 aa4.53□□□□□ -1.68
CUBNP3-201ENST00000457461 IGHV4-28A0A0C4DH34 117 aa4.53□□□□□ -1.69
CUBNP3-201ENST00000457461 K7EQD1 137 aa4.53□□□□□ -1.69
CUBNP3-201ENST00000457461 GYPEP15421 78 aa4.53□□□□□ -1.69
CUBNP3-201ENST00000457461 TRGV2A0A075B6R0 118 aa4.52□□□□□ -1.69
CUBNP3-201ENST00000457461 SLPIP03973 132 aa4.52□□□□□ -1.69
CUBNP3-201ENST00000457461 CCL18P55774 89 aa4.52□□□□□ -1.69
CUBNP3-201ENST00000457461 LINC00575Q6W349 94 aa4.52□□□□□ -1.69
CUBNP3-201ENST00000457461 ZNF706Q9Y5V0 76 aaPredicted RBP4.52□□□□□ -1.69
CUBNP3-201ENST00000457461 DNHD1Q96M86 4753 aa4.51□□□□□ -1.69
CUBNP3-201ENST00000457461 RTL8CO15255 209 aa4.51□□□□□ -1.69
CUBNP3-201ENST00000457461 COX7BP24311 80 aa4.51□□□□□ -1.69
CUBNP3-201ENST00000457461 LINC00242Q5T6M2 205 aa4.51□□□□□ -1.69
CUBNP3-201ENST00000457461 CHCHD7Q9BUK0 85 aa4.51□□□□□ -1.69
CUBNP3-201ENST00000457461 K7EIL1 84 aa4.5□□□□□ -1.69
CUBNP3-201ENST00000457461 KRTAP21-3Q3LHN1 58 aa4.5□□□□□ -1.69
CUBNP3-201ENST00000457461 RNASE13Q5GAN3 156 aaKnown RBP4.5□□□□□ -1.69
CUBNP3-201ENST00000457461 LINC00476Q8WZB0 136 aa4.5□□□□□ -1.69
CUBNP3-201ENST00000457461 PLA2G2DQ9UNK4 145 aa4.5□□□□□ -1.69
CUBNP3-201ENST00000457461 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.49□□□□□ -1.69
CUBNP3-201ENST00000457461 TRGV4A0A0C4DH28 118 aa4.49□□□□□ -1.69
CUBNP3-201ENST00000457461 DEFB130BP0DP73 79 aa4.49□□□□□ -1.69
CUBNP3-201ENST00000457461 DEFB130AP0DP74 79 aa4.49□□□□□ -1.69
CUBNP3-201ENST00000457461 IGLV4-60A0A075B6I1 120 aa4.48□□□□□ -1.69
CUBNP3-201ENST00000457461 DEFB4AO15263 64 aa4.48□□□□□ -1.69
CUBNP3-201ENST00000457461 SPART-AS1P0CW21 52 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms