RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	VPREB1	P12018	145 aa		7.71	□□□□□ -1.18
SNHG17-208	ENST00000456953	C2orf91	Q6ZV80	131 aa		7.71	□□□□□ -1.18
SNHG17-208	ENST00000456953	MUSTN1	Q8IVN3	82 aa		7.71	□□□□□ -1.18
SNHG17-208	ENST00000456953	ARL17A	Q8IVW1	177 aa		7.71	□□□□□ -1.18
SNHG17-208	ENST00000456953		A0A087X002	238 aa		7.7	□□□□□ -1.18
SNHG17-208	ENST00000456953	TSTD3	H0UI37	97 aa		7.7	□□□□□ -1.18
SNHG17-208	ENST00000456953	NCR3	O14931	201 aa		7.7	□□□□□ -1.18
SNHG17-208	ENST00000456953	EIF4EBP3	O60516	100 aa	Predicted RBP	7.7	□□□□□ -1.18
SNHG17-208	ENST00000456953	LBH	Q53QV2	105 aa	Predicted RBP	7.7	□□□□□ -1.18
SNHG17-208	ENST00000456953	TYMSOS	Q8TAI1	123 aa		7.7	□□□□□ -1.18
SNHG17-208	ENST00000456953	C22orf24	Q9Y442	160 aa		7.7	□□□□□ -1.18
SNHG17-208	ENST00000456953	IGLV5-37	A0A075B6J1	123 aa		7.69	□□□□□ -1.18
SNHG17-208	ENST00000456953	GAGE10	A6NGK3	116 aa		7.69	□□□□□ -1.18
SNHG17-208	ENST00000456953	CRYGA	P11844	174 aa		7.69	□□□□□ -1.18
SNHG17-208	ENST00000456953	MRPL55	Q7Z7F7	128 aa	Known RBP	7.69	□□□□□ -1.18
SNHG17-208	ENST00000456953		Q8NDZ9	215 aa		7.69	□□□□□ -1.18
SNHG17-208	ENST00000456953	RETNLB	Q9BQ08	111 aa		7.69	□□□□□ -1.18
SNHG17-208	ENST00000456953		M0R378	163 aa		7.68	□□□□□ -1.18
SNHG17-208	ENST00000456953	NDUFC2	O95298	119 aa		7.68	□□□□□ -1.18
SNHG17-208	ENST00000456953	TAL2	Q16559	108 aa		7.68	□□□□□ -1.18
SNHG17-208	ENST00000456953	PPDPF	Q9H3Y8	114 aa		7.68	□□□□□ -1.18
SNHG17-208	ENST00000456953	LINC01547	P58512	204 aa	Predicted RBP	7.67	□□□□□ -1.18
SNHG17-208	ENST00000456953	HSD52	Q0P140	79 aa		7.66	□□□□□ -1.18
SNHG17-208	ENST00000456953	IGLV7-46	A0A075B6I9	117 aa		7.65	□□□□□ -1.18
SNHG17-208	ENST00000456953	TRBV10-2	A0A0K0K1G8	114 aa		7.65	□□□□□ -1.18
SNHG17-208	ENST00000456953		A4D1N5	150 aa		7.65	□□□□□ -1.18
SNHG17-208	ENST00000456953	RPL37AP8	A6NKH3	93 aa		7.65	□□□□□ -1.18
SNHG17-208	ENST00000456953	S100A7L2	Q5SY68	101 aa		7.65	□□□□□ -1.18
SNHG17-208	ENST00000456953	CEND1	Q8N111	149 aa		7.65	□□□□□ -1.18
SNHG17-208	ENST00000456953	OR13C6P	Q8NH95	151 aa		7.65	□□□□□ -1.18
SNHG17-208	ENST00000456953	LINC00167	Q96N53	147 aa		7.65	□□□□□ -1.18
SNHG17-208	ENST00000456953	RPL28	P46779	137 aa	Known RBP	7.64	□□□□□ -1.19
SNHG17-208	ENST00000456953	IGKV2-28	A0A075B6P5	120 aa		7.63	□□□□□ -1.19
SNHG17-208	ENST00000456953	TMEM238L	A0A1B0GVL6	79 aa		7.63	□□□□□ -1.19
SNHG17-208	ENST00000456953		A6NDN8	102 aa		7.63	□□□□□ -1.19
SNHG17-208	ENST00000456953		A6NJY4	79 aa		7.63	□□□□□ -1.19
SNHG17-208	ENST00000456953	IGKV2D-28	P01615	120 aa		7.63	□□□□□ -1.19
SNHG17-208	ENST00000456953	TRBV10-3	A0A0K0K1G6	114 aa		7.62	□□□□□ -1.19
SNHG17-208	ENST00000456953	DDT	P30046	118 aa		7.62	□□□□□ -1.19
SNHG17-208	ENST00000456953	LINC00304	Q8N9R0	145 aa		7.62	□□□□□ -1.19
SNHG17-208	ENST00000456953	TRAV13-2	A0A0B4J235	113 aa		7.61	□□□□□ -1.19
SNHG17-208	ENST00000456953	CTAG1A	P78358	180 aa		7.61	□□□□□ -1.19
SNHG17-208	ENST00000456953	KRTAP13-2	Q52LG2	175 aa		7.61	□□□□□ -1.19
SNHG17-208	ENST00000456953	TMEM126A	Q9H061	195 aa		7.61	□□□□□ -1.19
SNHG17-208	ENST00000456953	BCE1	O60756	84 aa		7.6	□□□□□ -1.19
SNHG17-208	ENST00000456953	LINC00337	Q8N6G1	96 aa		7.6	□□□□□ -1.19
SNHG17-208	ENST00000456953	RAB37	Q96AX2	223 aa		7.6	□□□□□ -1.19
SNHG17-208	ENST00000456953	CBY1	Q9Y3M2	126 aa		7.6	□□□□□ -1.19
SNHG17-208	ENST00000456953		M0R143	59 aa		7.59	□□□□□ -1.19
SNHG17-208	ENST00000456953	IGLV6-57	P01721	117 aa		7.59	□□□□□ -1.19
SNHG17-208	ENST00000456953	FXYD2	P54710	66 aa		7.59	□□□□□ -1.19
SNHG17-208	ENST00000456953	ANAPC11	Q9NYG5	84 aa		7.59	□□□□□ -1.19
SNHG17-208	ENST00000456953	FAM229B	Q4G0N7	80 aa		7.58	□□□□□ -1.2
SNHG17-208	ENST00000456953	KCNQ1DN	Q9H478	68 aa		7.58	□□□□□ -1.2
SNHG17-208	ENST00000456953	TRAV23DV6	A0A075B6W5	121 aa		7.57	□□□□□ -1.2
SNHG17-208	ENST00000456953		A0A0B4J2C4	111 aa		7.57	□□□□□ -1.2
SNHG17-208	ENST00000456953	PRY	O14603	147 aa		7.57	□□□□□ -1.2
SNHG17-208	ENST00000456953	CFC1B	P0CG36	223 aa		7.57	□□□□□ -1.2
SNHG17-208	ENST00000456953	CFC1	P0CG37	223 aa		7.57	□□□□□ -1.2
SNHG17-208	ENST00000456953	HINT1	P49773	126 aa	Predicted RBP	7.57	□□□□□ -1.2
SNHG17-208	ENST00000456953	BVES-AS1	Q5T3Y7	98 aa		7.57	□□□□□ -1.2
SNHG17-208	ENST00000456953	NHP2	Q9NX24	153 aa	Known RBP	7.57	□□□□□ -1.2
SNHG17-208	ENST00000456953		H7C2G1	150 aa		7.55	□□□□□ -1.2
SNHG17-208	ENST00000456953	UBE2A	P49459	152 aa		7.55	□□□□□ -1.2
SNHG17-208	ENST00000456953	ASB16-AS1	Q495Z4	193 aa		7.55	□□□□□ -1.2
SNHG17-208	ENST00000456953	ETDC	A0A1B0GVM5	59 aa		7.54	□□□□□ -1.2
SNHG17-208	ENST00000456953	PCP4L1	A6NKN8	68 aa		7.54	□□□□□ -1.2
SNHG17-208	ENST00000456953	ZNF73	O43830	326 aa	Predicted RBP	7.54	□□□□□ -1.2
SNHG17-208	ENST00000456953		Q1RN00	199 aa		7.54	□□□□□ -1.2
SNHG17-208	ENST00000456953	FAM19A1	Q7Z5A9	133 aa		7.54	□□□□□ -1.2
SNHG17-208	ENST00000456953	PRO1854	Q9UHT4	67 aa		7.54	□□□□□ -1.2
SNHG17-208	ENST00000456953		K7ERJ3	54 aa		7.53	□□□□□ -1.2
SNHG17-208	ENST00000456953	BATF	Q16520	125 aa		7.53	□□□□□ -1.2
SNHG17-208	ENST00000456953	SPRR1A	P35321	89 aa		7.52	□□□□□ -1.21
SNHG17-208	ENST00000456953	C6orf99	Q4VX62	202 aa		7.52	□□□□□ -1.21
SNHG17-208	ENST00000456953	SMIM11B	Q8TCY0	68 aa		7.52	□□□□□ -1.21
SNHG17-208	ENST00000456953		A0A1B0GWB2	263 aa		7.51	□□□□□ -1.21
SNHG17-208	ENST00000456953	FP248	Q71RG6	208 aa	Predicted RBP	7.51	□□□□□ -1.21
SNHG17-208	ENST00000456953	KRTAP13-1	Q8IUC0	172 aa		7.51	□□□□□ -1.21
SNHG17-208	ENST00000456953	KRTAP4-1	Q9BYQ7	146 aa		7.51	□□□□□ -1.21
SNHG17-208	ENST00000456953	PRLH	P81277	87 aa		7.5	□□□□□ -1.21
SNHG17-208	ENST00000456953	VAMP3	Q15836	100 aa		7.5	□□□□□ -1.21
SNHG17-208	ENST00000456953	KRTAP13-3	Q3SY46	172 aa		7.49	□□□□□ -1.21
SNHG17-208	ENST00000456953		B5MCH6	92 aa		7.48	□□□□□ -1.21
SNHG17-208	ENST00000456953	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	7.48	□□□□□ -1.21
SNHG17-208	ENST00000456953	COX7B	P24311	80 aa		7.48	□□□□□ -1.21
SNHG17-208	ENST00000456953	PSMB2	P49721	201 aa		7.48	□□□□□ -1.21
SNHG17-208	ENST00000456953	SEC61B	P60468	96 aa	Known RBP	7.48	□□□□□ -1.21
SNHG17-208	ENST00000456953		Q6ZRX8	168 aa		7.48	□□□□□ -1.21
SNHG17-208	ENST00000456953	HIGD2A	Q9BW72	106 aa		7.48	□□□□□ -1.21
SNHG17-208	ENST00000456953	TRBV7-6	A0A0J9YX20	115 aa		7.46	□□□□□ -1.22
SNHG17-208	ENST00000456953	SPAG11A	Q6PDA7	123 aa		7.46	□□□□□ -1.22
SNHG17-208	ENST00000456953	ELOF1	P60002	83 aa	Known RBP	7.45	□□□□□ -1.22
SNHG17-208	ENST00000456953	SLC25A20	O43772	301 aa		7.44	□□□□□ -1.22
SNHG17-208	ENST00000456953	COX6C	P09669	75 aa		7.44	□□□□□ -1.22
SNHG17-208	ENST00000456953	DHRS4-AS1	Q9P1J3	65 aa		7.44	□□□□□ -1.22
SNHG17-208	ENST00000456953	LCE2C	Q5TA81	110 aa		7.43	□□□□□ -1.22
SNHG17-208	ENST00000456953	SMCR5	Q8TEV8	140 aa		7.43	□□□□□ -1.22
SNHG17-208	ENST00000456953	SNHG12	Q9BXW3	62 aa		7.43	□□□□□ -1.22
SNHG17-208	ENST00000456953		H0YGX0	51 aa		7.42	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms