RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 TRAPPC1Q9Y5R8 145 aa12.25□□□□□ -0.45
PTPRA-208ENST00000455631 USH2AO75445 5202 aa12.25□□□□□ -0.45
PTPRA-208ENST00000455631 NDUFC2O95298 119 aa12.24□□□□□ -0.45
PTPRA-208ENST00000455631 TSPEAR-AS2P59090 65 aa12.24□□□□□ -0.45
PTPRA-208ENST00000455631 TMEM218A2RU14 115 aa12.23□□□□□ -0.45
PTPRA-208ENST00000455631 HINT1P49773 126 aaPredicted RBP12.23□□□□□ -0.45
PTPRA-208ENST00000455631 COMMD7Q86VX2 200 aa12.23□□□□□ -0.45
PTPRA-208ENST00000455631 RPS10P5Q9NQ39 176 aa12.23□□□□□ -0.45
PTPRA-208ENST00000455631 Q6Q795 121 aa12.22□□□□□ -0.45
PTPRA-208ENST00000455631 CD164Q04900 197 aa12.21□□□□□ -0.45
PTPRA-208ENST00000455631 C1orf195Q5TG92 126 aa12.19□□□□□ -0.46
PTPRA-208ENST00000455631 CFC1P0CG37 223 aa12.18□□□□□ -0.46
PTPRA-208ENST00000455631 UQCC3Q6UW78 93 aa12.18□□□□□ -0.46
PTPRA-208ENST00000455631 LEPROTO15243 131 aa12.17□□□□□ -0.46
PTPRA-208ENST00000455631 NPC2P61916 151 aa12.17□□□□□ -0.46
PTPRA-208ENST00000455631 IFITM2Q01629 132 aa12.17□□□□□ -0.46
PTPRA-208ENST00000455631 Q1RN00 199 aa12.17□□□□□ -0.46
PTPRA-208ENST00000455631 PRO1933Q9H354 126 aa12.17□□□□□ -0.46
PTPRA-208ENST00000455631 Q5XG85 94 aa12.15□□□□□ -0.46
PTPRA-208ENST00000455631 DHRS4-AS1Q9P1J3 65 aa12.15□□□□□ -0.46
PTPRA-208ENST00000455631 CBY1Q9Y3M2 126 aa12.15□□□□□ -0.46
PTPRA-208ENST00000455631 H0Y8G0 127 aa12.14□□□□□ -0.47
PTPRA-208ENST00000455631 CLLU1Q5K131 121 aa12.14□□□□□ -0.47
PTPRA-208ENST00000455631 SOSTDC1Q6X4U4 206 aa12.14□□□□□ -0.47
PTPRA-208ENST00000455631 J3QQQ9 107 aa12.12□□□□□ -0.47
PTPRA-208ENST00000455631 EIF4EBP3O60516 100 aaPredicted RBP12.12□□□□□ -0.47
PTPRA-208ENST00000455631 DEFB105AQ8NG35 78 aa12.11□□□□□ -0.47
PTPRA-208ENST00000455631 CHCHD1Q96BP2 118 aaKnown RBP12.11□□□□□ -0.47
PTPRA-208ENST00000455631 TAL2Q16559 108 aa12.1□□□□□ -0.47
PTPRA-208ENST00000455631 LGALS3P17931 250 aaKnown RBP12.09□□□□□ -0.47
PTPRA-208ENST00000455631 NMUP48645 174 aa12.09□□□□□ -0.47
PTPRA-208ENST00000455631 RHEBQ15382 184 aa12.09□□□□□ -0.47
PTPRA-208ENST00000455631 SMIM29Q86T20 159 aa12.09□□□□□ -0.47
PTPRA-208ENST00000455631 KRTAP9-8Q9BYQ0 159 aa12.09□□□□□ -0.47
PTPRA-208ENST00000455631 FCGBPQ9Y6R7 5405 aaPredicted RBP12.09□□□□□ -0.47
PTPRA-208ENST00000455631 OR13C6PQ8NH95 151 aa12.08□□□□□ -0.48
PTPRA-208ENST00000455631 AKR1D1P51857 326 aa12.07□□□□□ -0.48
PTPRA-208ENST00000455631 A0A0G2JQZ4 141 aa12.05□□□□□ -0.48
PTPRA-208ENST00000455631 HERVK_113P61574 105 aa12.05□□□□□ -0.48
PTPRA-208ENST00000455631 ADAMTSL4-AS1Q5T5F5 129 aa12.05□□□□□ -0.48
PTPRA-208ENST00000455631 TEX49A0A1B0GTD5 131 aa12.03□□□□□ -0.48
PTPRA-208ENST00000455631 PLNP26678 52 aa12.03□□□□□ -0.48
PTPRA-208ENST00000455631 COX7BP24311 80 aa12.02□□□□□ -0.49
PTPRA-208ENST00000455631 ELOF1P60002 83 aaKnown RBP12.02□□□□□ -0.49
PTPRA-208ENST00000455631 HSBP1O75506 76 aa12.01□□□□□ -0.49
PTPRA-208ENST00000455631 A0A0J9YXY3 114 aa12□□□□□ -0.49
PTPRA-208ENST00000455631 ATP11AUNQ6ZP68 121 aa11.99□□□□□ -0.49
PTPRA-208ENST00000455631 KRTAP19-1Q8IUB9 90 aa11.99□□□□□ -0.49
PTPRA-208ENST00000455631 SPANXCQ9NY87 97 aa11.99□□□□□ -0.49
PTPRA-208ENST00000455631 C6orf99Q4VX62 202 aa11.98□□□□□ -0.49
PTPRA-208ENST00000455631 TCL1BO95988 128 aa11.97□□□□□ -0.49
PTPRA-208ENST00000455631 DPM2O94777 84 aa11.96□□□□□ -0.49
PTPRA-208ENST00000455631 C10orf91Q5T1B1 145 aa11.96□□□□□ -0.49
PTPRA-208ENST00000455631 PMCHL2Q9BQD1 86 aa11.96□□□□□ -0.49
PTPRA-208ENST00000455631 SPANXDQ9BXN6 97 aa11.96□□□□□ -0.49
PTPRA-208ENST00000455631 LEPROTL1O95214 131 aa11.93□□□□□ -0.5
PTPRA-208ENST00000455631 LINC00308Q8TCZ7 52 aa11.93□□□□□ -0.5
PTPRA-208ENST00000455631 IGKCP01834 107 aa11.92□□□□□ -0.5
PTPRA-208ENST00000455631 PCP2Q8IVA1 136 aa11.92□□□□□ -0.5
PTPRA-208ENST00000455631 SYNE2Q8WXH0 6885 aaKnown RBP11.91□□□□□ -0.5
PTPRA-208ENST00000455631 C20orf202A1L168 122 aa11.91□□□□□ -0.5
PTPRA-208ENST00000455631 Q75L30 129 aa11.91□□□□□ -0.5
PTPRA-208ENST00000455631 MACF1Q9UPN3 7388 aaKnown RBP11.9□□□□□ -0.5
PTPRA-208ENST00000455631 IGLV5-48A0A075B6I7 105 aa11.89□□□□□ -0.51
PTPRA-208ENST00000455631 OBSCN-AS1Q96MR7 158 aa11.89□□□□□ -0.51
PTPRA-208ENST00000455631 LITAFQ99732 161 aa11.88□□□□□ -0.51
PTPRA-208ENST00000455631 LCE2BO14633 110 aa11.86□□□□□ -0.51
PTPRA-208ENST00000455631 MT2AP02795 61 aa11.86□□□□□ -0.51
PTPRA-208ENST00000455631 E9PLD3 99 aa11.85□□□□□ -0.51
PTPRA-208ENST00000455631 HSPB8Q9UJY1 196 aa11.84□□□□□ -0.51
PTPRA-208ENST00000455631 TRBV7-6A0A0J9YX20 115 aa11.83□□□□□ -0.52
PTPRA-208ENST00000455631 A0A1B0GWB2 263 aa11.82□□□□□ -0.52
PTPRA-208ENST00000455631 FABP4P15090 132 aa11.82□□□□□ -0.52
PTPRA-208ENST00000455631 LINC00518Q8N0U6 118 aa11.82□□□□□ -0.52
PTPRA-208ENST00000455631 TRBV20-1A0A075B6N2 111 aa11.8□□□□□ -0.52
PTPRA-208ENST00000455631 TIMM17BO60830 172 aa11.8□□□□□ -0.52
PTPRA-208ENST00000455631 SERF1AO75920 110 aa11.8□□□□□ -0.52
PTPRA-208ENST00000455631 APOC3P02656 99 aa11.79□□□□□ -0.52
PTPRA-208ENST00000455631 LINC00310P59036 64 aa11.79□□□□□ -0.52
PTPRA-208ENST00000455631 MT1FP04733 61 aa11.78□□□□□ -0.52
PTPRA-208ENST00000455631 YPEL4Q96NS1 127 aa11.77□□□□□ -0.53
PTPRA-208ENST00000455631 F8WEM9 126 aa11.76□□□□□ -0.53
PTPRA-208ENST00000455631 SNAPINO95295 136 aa11.76□□□□□ -0.53
PTPRA-208ENST00000455631 Q96NJ1 140 aa11.74□□□□□ -0.53
PTPRA-208ENST00000455631 KRTAP9-3Q9BYQ3 159 aa11.73□□□□□ -0.53
PTPRA-208ENST00000455631 TRBV7-7A0A0K0K1E9 115 aa11.72□□□□□ -0.53
PTPRA-208ENST00000455631 SVBPQ8N300 66 aa11.72□□□□□ -0.53
PTPRA-208ENST00000455631 ZNF815PA8K554 130 aa11.71□□□□□ -0.53
PTPRA-208ENST00000455631 KRTAP10-10P60014 251 aa11.71□□□□□ -0.53
PTPRA-208ENST00000455631 NHP2Q9NX24 153 aaKnown RBP11.7□□□□□ -0.54
PTPRA-208ENST00000455631 A4D1N5 150 aa11.69□□□□□ -0.54
PTPRA-208ENST00000455631 A6NDN8 102 aa11.69□□□□□ -0.54
PTPRA-208ENST00000455631 NDUFA5Q16718 116 aa11.69□□□□□ -0.54
PTPRA-208ENST00000455631 TRGC2P03986 189 aa11.68□□□□□ -0.54
PTPRA-208ENST00000455631 CLEC2BQ92478 149 aa11.68□□□□□ -0.54
PTPRA-208ENST00000455631 FAM236DA0A1B0GTK5 79 aa11.66□□□□□ -0.54
PTPRA-208ENST00000455631 FAM236CP0DP71 79 aa11.66□□□□□ -0.54
PTPRA-208ENST00000455631 Q6JHZ5 121 aa11.66□□□□□ -0.54
PTPRA-208ENST00000455631 IGFL1Q6UW32 110 aa11.66□□□□□ -0.54
PTPRA-208ENST00000455631 TTTY13Q9BZ97 58 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms