RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 FLG2Q5D862 2391 aaPredicted RBP1.84□□□□□ -2.12
HMGB3P21-201ENST00000452483 DDX60Q8IY21 1712 aaKnown RBP1.83□□□□□ -2.12
HMGB3P21-201ENST00000452483 K7EQZ3 153 aa1.83□□□□□ -2.12
HMGB3P21-201ENST00000452483 LYNX1P0DP58 116 aa1.83□□□□□ -2.12
HMGB3P21-201ENST00000452483 CDKN2A-AS1Q9UH64 79 aa1.83□□□□□ -2.12
HMGB3P21-201ENST00000452483 TNRC6CQ9HCJ0 1690 aaKnown RBP1.83□□□□□ -2.12
HMGB3P21-201ENST00000452483 NDUFA3O95167 84 aa1.82□□□□□ -2.12
HMGB3P21-201ENST00000452483 LCE1CQ5T751 118 aa1.82□□□□□ -2.12
HMGB3P21-201ENST00000452483 LCE1BQ5T7P3 118 aa1.82□□□□□ -2.12
HMGB3P21-201ENST00000452483 DEFB123Q8N688 67 aa1.82□□□□□ -2.12
HMGB3P21-201ENST00000452483 CNFNQ9BYD5 112 aa1.81□□□□□ -2.12
HMGB3P21-201ENST00000452483 CDC42BPAQ5VT25 1732 aa1.8□□□□□ -2.12
HMGB3P21-201ENST00000452483 CCL22O00626 93 aa1.8□□□□□ -2.12
HMGB3P21-201ENST00000452483 LINC00158P58513 81 aa1.8□□□□□ -2.12
HMGB3P21-201ENST00000452483 CNTRLQ7Z7A1 2325 aa1.8□□□□□ -2.12
HMGB3P21-201ENST00000452483 NAV3Q8IVL0 2385 aa1.8□□□□□ -2.12
HMGB3P21-201ENST00000452483 NFAT5O94916 1531 aa1.8□□□□□ -2.12
HMGB3P21-201ENST00000452483 KRTAP6-3Q3LI67 103 aa1.79□□□□□ -2.12
HMGB3P21-201ENST00000452483 COX6B2Q6YFQ2 88 aa1.79□□□□□ -2.12
HMGB3P21-201ENST00000452483 Q8IZM0 81 aa1.79□□□□□ -2.12
HMGB3P21-201ENST00000452483 PRO0255Q9UI72 69 aa1.79□□□□□ -2.12
HMGB3P21-201ENST00000452483 CACNA1EQ15878 2313 aa1.79□□□□□ -2.12
HMGB3P21-201ENST00000452483 TRANK1O15050 2925 aa1.79□□□□□ -2.12
HMGB3P21-201ENST00000452483 C4AP0C0L4 1744 aa1.78□□□□□ -2.12
HMGB3P21-201ENST00000452483 SPINK9Q5DT21 86 aa1.78□□□□□ -2.12
HMGB3P21-201ENST00000452483 KRTAP13-1Q8IUC0 172 aa1.78□□□□□ -2.12
HMGB3P21-201ENST00000452483 TMEM167BQ9NRX6 74 aa1.78□□□□□ -2.12
HMGB3P21-201ENST00000452483 COX6A2Q02221 97 aa1.77□□□□□ -2.13
HMGB3P21-201ENST00000452483 PRO3102Q9H379 93 aa1.77□□□□□ -2.13
HMGB3P21-201ENST00000452483 ATP7AQ04656 1500 aa1.76□□□□□ -2.13
HMGB3P21-201ENST00000452483 JMJD1CQ15652 2540 aa1.76□□□□□ -2.13
HMGB3P21-201ENST00000452483 J3QKU1 62 aa1.76□□□□□ -2.13
HMGB3P21-201ENST00000452483 FAM208BQ5VWN6 2430 aa1.76□□□□□ -2.13
HMGB3P21-201ENST00000452483 C4BP0C0L5 1744 aa1.75□□□□□ -2.13
HMGB3P21-201ENST00000452483 FBN1P35555 2871 aaKnown RBP1.74□□□□□ -2.13
HMGB3P21-201ENST00000452483 KIF21BO75037 1637 aa1.74□□□□□ -2.13
HMGB3P21-201ENST00000452483 LINC00308Q8TCZ7 52 aa1.74□□□□□ -2.13
HMGB3P21-201ENST00000452483 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.74□□□□□ -2.13
HMGB3P21-201ENST00000452483 IQGAP1P46940 1657 aa1.74□□□□□ -2.13
HMGB3P21-201ENST00000452483 SAMD9LQ8IVG5 1584 aa1.73□□□□□ -2.13
HMGB3P21-201ENST00000452483 BPTFQ12830 3046 aa1.73□□□□□ -2.13
HMGB3P21-201ENST00000452483 LOC730098B7Z3J9 87 aa1.73□□□□□ -2.13
HMGB3P21-201ENST00000452483 SNRPGP62308 76 aaKnown RBP1.73□□□□□ -2.13
HMGB3P21-201ENST00000452483 Q6ZSA8 131 aa1.73□□□□□ -2.13
HMGB3P21-201ENST00000452483 C10orf95Q9H7T3 257 aa1.73□□□□□ -2.13
HMGB3P21-201ENST00000452483 CNOT1A5YKK6 2376 aaKnown RBP1.73□□□□□ -2.13
HMGB3P21-201ENST00000452483 OTOGLQ3ZCN5 2332 aa1.72□□□□□ -2.13
HMGB3P21-201ENST00000452483 DOPEY2Q9Y3R5 2298 aa1.72□□□□□ -2.13
HMGB3P21-201ENST00000452483 KRTAP12-4P60329 112 aa1.72□□□□□ -2.13
HMGB3P21-201ENST00000452483 MINOS1Q5TGZ0 78 aa1.72□□□□□ -2.13
HMGB3P21-201ENST00000452483 LYNX1G3V0Z9 82 aa1.71□□□□□ -2.14
HMGB3P21-201ENST00000452483 LMO7Q8WWI1 1683 aa1.71□□□□□ -2.14
HMGB3P21-201ENST00000452483 PRB3Q04118 309 aaPredicted RBP1.7□□□□□ -2.14
HMGB3P21-201ENST00000452483 APLNQ9ULZ1 77 aa1.7□□□□□ -2.14
HMGB3P21-201ENST00000452483 COL6A6A6NMZ7 2263 aa1.68□□□□□ -2.14
HMGB3P21-201ENST00000452483 H0YAA0 97 aa1.68□□□□□ -2.14
HMGB3P21-201ENST00000452483 SPRR1AP35321 89 aa1.68□□□□□ -2.14
HMGB3P21-201ENST00000452483 TFF3Q07654 80 aa1.68□□□□□ -2.14
HMGB3P21-201ENST00000452483 LELP1Q5T871 98 aa1.68□□□□□ -2.14
HMGB3P21-201ENST00000452483 HMCN1Q96RW7 5635 aa1.68□□□□□ -2.14
HMGB3P21-201ENST00000452483 COL6A3P12111 3177 aa1.67□□□□□ -2.14
HMGB3P21-201ENST00000452483 C6orf48Q9UBA6 75 aa1.67□□□□□ -2.14
HMGB3P21-201ENST00000452483 H1FX-AS1Q4G0G2 97 aa1.66□□□□□ -2.14
HMGB3P21-201ENST00000452483 Q5VSD8 79 aa1.66□□□□□ -2.14
HMGB3P21-201ENST00000452483 DEFB105AQ8NG35 78 aa1.66□□□□□ -2.14
HMGB3P21-201ENST00000452483 SMIM2Q9BVW6 85 aa1.66□□□□□ -2.14
HMGB3P21-201ENST00000452483 GPR98Q8WXG9 6306 aa1.66□□□□□ -2.14
HMGB3P21-201ENST00000452483 PLCE1Q9P212 2302 aa1.66□□□□□ -2.14
HMGB3P21-201ENST00000452483 SORL1Q92673 2214 aa1.66□□□□□ -2.14
HMGB3P21-201ENST00000452483 SRCAPQ6ZRS2 3230 aa1.65□□□□□ -2.14
HMGB3P21-201ENST00000452483 WFDC13Q8IUB5 93 aa1.65□□□□□ -2.15
HMGB3P21-201ENST00000452483 TRIOBPQ9H2D6 2365 aa1.64□□□□□ -2.15
HMGB3P21-201ENST00000452483 ZNF462Q96JM2 2506 aa1.64□□□□□ -2.15
HMGB3P21-201ENST00000452483 A0A0D9SG42 100 aa1.64□□□□□ -2.15
HMGB3P21-201ENST00000452483 PIEZO2Q9H5I5 2752 aa1.64□□□□□ -2.15
HMGB3P21-201ENST00000452483 MROH2BQ7Z745 1585 aa1.64□□□□□ -2.15
HMGB3P21-201ENST00000452483 IAPPP10997 89 aa1.63□□□□□ -2.15
HMGB3P21-201ENST00000452483 SPRR1BP22528 89 aa1.63□□□□□ -2.15
HMGB3P21-201ENST00000452483 CHD8Q9HCK8 2581 aa1.63□□□□□ -2.15
HMGB3P21-201ENST00000452483 PTPRQQ9UMZ3 2332 aa1.62□□□□□ -2.15
HMGB3P21-201ENST00000452483 TEP1Q99973 2627 aaKnown RBP1.62□□□□□ -2.15
HMGB3P21-201ENST00000452483 KRTAP12-3P60328 96 aa1.61□□□□□ -2.15
HMGB3P21-201ENST00000452483 PTPRZ1P23471 2315 aaPredicted RBP1.61□□□□□ -2.15
HMGB3P21-201ENST00000452483 UBR4Q5T4S7 5183 aa1.61□□□□□ -2.15
HMGB3P21-201ENST00000452483 USF3Q68DE3 2245 aa1.6□□□□□ -2.15
HMGB3P21-201ENST00000452483 NDUFA1O15239 70 aa1.6□□□□□ -2.15
HMGB3P21-201ENST00000452483 DEFB130BP0DP73 79 aa1.6□□□□□ -2.15
HMGB3P21-201ENST00000452483 DEFB130AP0DP74 79 aa1.6□□□□□ -2.15
HMGB3P21-201ENST00000452483 ASH1LQ9NR48 2969 aaKnown RBP1.6□□□□□ -2.15
HMGB3P21-201ENST00000452483 ROS1P08922 2347 aa1.6□□□□□ -2.15
HMGB3P21-201ENST00000452483 DUOX1Q9NRD9 1551 aa1.59□□□□□ -2.15
HMGB3P21-201ENST00000452483 ALMS1Q8TCU4 4167 aa1.59□□□□□ -2.15
HMGB3P21-201ENST00000452483 USP9XQ93008 2570 aaPredicted RBP1.59□□□□□ -2.15
HMGB3P21-201ENST00000452483 MAST4O15021 2626 aa1.59□□□□□ -2.16
HMGB3P21-201ENST00000452483 KLK9Q2XQG4 91 aa1.58□□□□□ -2.16
HMGB3P21-201ENST00000452483 SETXQ7Z333 2677 aaKnown RBP1.57□□□□□ -2.16
HMGB3P21-201ENST00000452483 RPS27P42677 84 aaKnown RBP1.56□□□□□ -2.16
HMGB3P21-201ENST00000452483 RPS27LQ71UM5 84 aaKnown RBP1.56□□□□□ -2.16
HMGB3P21-201ENST00000452483 KRTAP21-3Q3LHN1 58 aa1.55□□□□□ -2.16
HMGB3P21-201ENST00000452483 C2CD3Q4AC94 2353 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms