RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 DSCR8Q96T75 97 aa1.64□□□□□ -2.15
HMGB1P48-201ENST00000446155 DNAH6Q9C0G6 4158 aa1.63□□□□□ -2.15
HMGB1P48-201ENST00000446155 TRBV10-3A0A0K0K1G6 114 aa1.63□□□□□ -2.15
HMGB1P48-201ENST00000446155 LYNX1G3V0Z9 82 aa1.63□□□□□ -2.15
HMGB1P48-201ENST00000446155 LYNX1P0DP58 116 aa1.63□□□□□ -2.15
HMGB1P48-201ENST00000446155 IFITM1P13164 125 aa1.63□□□□□ -2.15
HMGB1P48-201ENST00000446155 Q6ZQY7 126 aa1.63□□□□□ -2.15
HMGB1P48-201ENST00000446155 C5orf56Q8N8D9 126 aa1.63□□□□□ -2.15
HMGB1P48-201ENST00000446155 SNRNP200O75643 2136 aaKnown RBP1.63□□□□□ -2.15
HMGB1P48-201ENST00000446155 FAT4Q6V0I7 4981 aa1.62□□□□□ -2.15
HMGB1P48-201ENST00000446155 TMEM218A2RU14 115 aa1.62□□□□□ -2.15
HMGB1P48-201ENST00000446155 DEFB108BQ8NET1 73 aa1.62□□□□□ -2.15
HMGB1P48-201ENST00000446155 LINC00208Q96KT6 92 aa1.62□□□□□ -2.15
HMGB1P48-201ENST00000446155 LOC285095A0A1B0GVY8 99 aa1.61□□□□□ -2.15
HMGB1P48-201ENST00000446155 SPINK8P0C7L1 97 aa1.61□□□□□ -2.15
HMGB1P48-201ENST00000446155 CAV3P56539 151 aa1.61□□□□□ -2.15
HMGB1P48-201ENST00000446155 CCL8P80075 99 aa1.61□□□□□ -2.15
HMGB1P48-201ENST00000446155 DEFB112Q30KQ8 113 aa1.61□□□□□ -2.15
HMGB1P48-201ENST00000446155 C4orf33Q8N1A6 199 aa1.61□□□□□ -2.15
HMGB1P48-201ENST00000446155 TRAV30A0A087WSZ9 112 aa1.6□□□□□ -2.15
HMGB1P48-201ENST00000446155 UQCRHLA0A096LP55 91 aa1.6□□□□□ -2.15
HMGB1P48-201ENST00000446155 FAM24AA6NFZ4 105 aa1.6□□□□□ -2.15
HMGB1P48-201ENST00000446155 LY6G6CO95867 125 aa1.6□□□□□ -2.15
HMGB1P48-201ENST00000446155 S100A8P05109 93 aa1.6□□□□□ -2.15
HMGB1P48-201ENST00000446155 UBE2D1P51668 147 aa1.6□□□□□ -2.15
HMGB1P48-201ENST00000446155 ZNF56Q15929 161 aa1.6□□□□□ -2.15
HMGB1P48-201ENST00000446155 C5orf38Q86SI9 138 aa1.6□□□□□ -2.15
HMGB1P48-201ENST00000446155 Q86TA4 180 aa1.6□□□□□ -2.15
HMGB1P48-201ENST00000446155 LRP2P98164 4655 aa1.6□□□□□ -2.15
HMGB1P48-201ENST00000446155 VPS13BQ7Z7G8 4022 aa1.59□□□□□ -2.15
HMGB1P48-201ENST00000446155 TRAV13-2A0A0B4J235 113 aa1.59□□□□□ -2.15
HMGB1P48-201ENST00000446155 HCG22E2RYF7 251 aa1.59□□□□□ -2.15
HMGB1P48-201ENST00000446155 LINC00575Q6W349 94 aa1.59□□□□□ -2.15
HMGB1P48-201ENST00000446155 ZNF818PQ6ZRF7 136 aa1.59□□□□□ -2.15
HMGB1P48-201ENST00000446155 Q6ZSA8 131 aa1.59□□□□□ -2.15
HMGB1P48-201ENST00000446155 C20orf197Q8N268 126 aa1.59□□□□□ -2.15
HMGB1P48-201ENST00000446155 ACBD7Q8N6N7 88 aa1.59□□□□□ -2.15
HMGB1P48-201ENST00000446155 PPP1R1CQ8WVI7 109 aa1.59□□□□□ -2.15
HMGB1P48-201ENST00000446155 TRBV30A0A0K0K1B3 111 aa1.58□□□□□ -2.16
HMGB1P48-201ENST00000446155 FXYD1O00168 92 aa1.58□□□□□ -2.16
HMGB1P48-201ENST00000446155 CCL22O00626 93 aa1.58□□□□□ -2.16
HMGB1P48-201ENST00000446155 SIX6O95475 246 aa1.58□□□□□ -2.16
HMGB1P48-201ENST00000446155 CCL3L1P16619 93 aa1.58□□□□□ -2.16
HMGB1P48-201ENST00000446155 NCBP2-AS2Q69YL0 99 aa1.58□□□□□ -2.16
HMGB1P48-201ENST00000446155 AQP10Q96PS8 301 aa1.58□□□□□ -2.16
HMGB1P48-201ENST00000446155 BET1LQ9NYM9 111 aa1.58□□□□□ -2.16
HMGB1P48-201ENST00000446155 DOCK11Q5JSL3 2073 aa1.57□□□□□ -2.16
HMGB1P48-201ENST00000446155 SSSCA1O60232 199 aa1.57□□□□□ -2.16
HMGB1P48-201ENST00000446155 ANGP03950 147 aaKnown RBP1.57□□□□□ -2.16
HMGB1P48-201ENST00000446155 SSBP1Q04837 148 aaKnown RBP1.57□□□□□ -2.16
HMGB1P48-201ENST00000446155 COMMD6Q7Z4G1 85 aa1.57□□□□□ -2.16
HMGB1P48-201ENST00000446155 DPH3P1Q9H4G8 78 aa1.57□□□□□ -2.16
HMGB1P48-201ENST00000446155 PKHD1L1Q86WI1 4243 aa1.56□□□□□ -2.16
HMGB1P48-201ENST00000446155 UBE2L5PA0A1B0GUS4 154 aa1.56□□□□□ -2.16
HMGB1P48-201ENST00000446155 ELOF1P60002 83 aaKnown RBP1.56□□□□□ -2.16
HMGB1P48-201ENST00000446155 UBE2L3P68036 154 aaKnown RBP1.56□□□□□ -2.16
HMGB1P48-201ENST00000446155 KLKP1Q107X0 134 aa1.56□□□□□ -2.16
HMGB1P48-201ENST00000446155 TTC9CQ8N5M4 171 aa1.56□□□□□ -2.16
HMGB1P48-201ENST00000446155 COX7B2Q8TF08 81 aa1.56□□□□□ -2.16
HMGB1P48-201ENST00000446155 DYNLRB1Q9NP97 96 aa1.56□□□□□ -2.16
HMGB1P48-201ENST00000446155 LINC00312Q9Y6C7 94 aa1.56□□□□□ -2.16
HMGB1P48-201ENST00000446155 LRP1Q07954 4544 aaKnown RBP1.55□□□□□ -2.16
HMGB1P48-201ENST00000446155 TRBV7-1A0A0A6YYK4 115 aa1.55□□□□□ -2.16
HMGB1P48-201ENST00000446155 A0A1W2PPM0 123 aa1.55□□□□□ -2.16
HMGB1P48-201ENST00000446155 M0R143 59 aa1.55□□□□□ -2.16
HMGB1P48-201ENST00000446155 RBAKDNA6NC62 111 aa1.54□□□□□ -2.16
HMGB1P48-201ENST00000446155 TMEM262E9PQX1 116 aa1.54□□□□□ -2.16
HMGB1P48-201ENST00000446155 ATP5EP56381 51 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P48-201ENST00000446155 S100A10P60903 97 aa1.54□□□□□ -2.16
HMGB1P48-201ENST00000446155 FAM74A4Q5TZK3 123 aa1.54□□□□□ -2.16
HMGB1P48-201ENST00000446155 C10orf99Q6UWK7 81 aa1.54□□□□□ -2.16
HMGB1P48-201ENST00000446155 CYP4F30PQ9H0H9 118 aa1.54□□□□□ -2.16
HMGB1P48-201ENST00000446155 FSIP2Q5CZC0 6907 aa1.54□□□□□ -2.16
HMGB1P48-201ENST00000446155 C10orf128Q5T292 105 aa1.53□□□□□ -2.16
HMGB1P48-201ENST00000446155 TMEM14BQ9NUH8 114 aa1.53□□□□□ -2.16
HMGB1P48-201ENST00000446155 CRCT1Q9UGL9 99 aa1.53□□□□□ -2.16
HMGB1P48-201ENST00000446155 FAT3Q8TDW7 4589 aa1.52□□□□□ -2.17
HMGB1P48-201ENST00000446155 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P48-201ENST00000446155 A0A087WTM6 91 aa1.52□□□□□ -2.17
HMGB1P48-201ENST00000446155 MRPL33O75394 65 aaKnown RBP1.52□□□□□ -2.17
HMGB1P48-201ENST00000446155 LINC00474Q9P2X8 69 aa1.52□□□□□ -2.17
HMGB1P48-201ENST00000446155 H3BQ15 152 aa1.51□□□□□ -2.17
HMGB1P48-201ENST00000446155 EDDM3BP56851 147 aa1.51□□□□□ -2.17
HMGB1P48-201ENST00000446155 PKIAP61925 76 aa1.51□□□□□ -2.17
HMGB1P48-201ENST00000446155 MYOZ3Q8TDC0 251 aa1.51□□□□□ -2.17
HMGB1P48-201ENST00000446155 V9GYV3 84 aa1.51□□□□□ -2.17
HMGB1P48-201ENST00000446155 H3BUX3 64 aa1.5□□□□□ -2.17
HMGB1P48-201ENST00000446155 SNCAP37840 140 aa1.5□□□□□ -2.17
HMGB1P48-201ENST00000446155 PLAC4Q8WY50 150 aa1.5□□□□□ -2.17
HMGB1P48-201ENST00000446155 MPC2O95563 127 aa1.49□□□□□ -2.17
HMGB1P48-201ENST00000446155 ASIPP42127 132 aa1.49□□□□□ -2.17
HMGB1P48-201ENST00000446155 PRB3Q04118 309 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P48-201ENST00000446155 Q5VSD8 79 aa1.48□□□□□ -2.17
HMGB1P48-201ENST00000446155 TNXBP22105 4242 aa1.48□□□□□ -2.17
HMGB1P48-201ENST00000446155 TNCP24821 2201 aa1.48□□□□□ -2.17
HMGB1P48-201ENST00000446155 TRBV7-3A0A075B6L6 115 aa1.47□□□□□ -2.17
HMGB1P48-201ENST00000446155 GNG11P61952 73 aa1.47□□□□□ -2.17
HMGB1P48-201ENST00000446155 SPINK13Q1W4C9 94 aa1.47□□□□□ -2.17
HMGB1P48-201ENST00000446155 COL5A1-AS1Q5SY13 56 aa1.47□□□□□ -2.17
HMGB1P48-201ENST00000446155 VMO1Q7Z5L0 202 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms