RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 CFC1BP0CG36 223 aa8.1□□□□□ -1.11
TIMP1-204ENST00000445623 CFC1P0CG37 223 aa8.1□□□□□ -1.11
TIMP1-204ENST00000445623 SPRR1AP35321 89 aa8.1□□□□□ -1.11
TIMP1-204ENST00000445623 RPL13AP40429 203 aaKnown RBP8.1□□□□□ -1.11
TIMP1-204ENST00000445623 RPL28P46779 137 aaKnown RBP8.1□□□□□ -1.11
TIMP1-204ENST00000445623 CTAG1AP78358 180 aa8.1□□□□□ -1.11
TIMP1-204ENST00000445623 FAM19A1Q7Z5A9 133 aa8.1□□□□□ -1.11
TIMP1-204ENST00000445623 DIRC1Q969H9 104 aa8.1□□□□□ -1.11
TIMP1-204ENST00000445623 KRTAP10-4P60372 401 aaPredicted RBP8.09□□□□□ -1.11
TIMP1-204ENST00000445623 BVES-AS1Q5T3Y7 98 aa8.08□□□□□ -1.12
TIMP1-204ENST00000445623 NHP2Q9NX24 153 aaKnown RBP8.08□□□□□ -1.12
TIMP1-204ENST00000445623 ZNF861PO60384 105 aa8.07□□□□□ -1.12
TIMP1-204ENST00000445623 VPS13BQ7Z7G8 4022 aa8.07□□□□□ -1.12
TIMP1-204ENST00000445623 FAT1Q14517 4588 aa8.07□□□□□ -1.12
TIMP1-204ENST00000445623 H0Y9J4 135 aa8.06□□□□□ -1.12
TIMP1-204ENST00000445623 C6orf99Q4VX62 202 aa8.06□□□□□ -1.12
TIMP1-204ENST00000445623 SPINK6Q6UWN8 80 aa8.06□□□□□ -1.12
TIMP1-204ENST00000445623 SMIM11BQ8TCY0 68 aa8.06□□□□□ -1.12
TIMP1-204ENST00000445623 PRO1854Q9UHT4 67 aa8.06□□□□□ -1.12
TIMP1-204ENST00000445623 HERC2O95714 4834 aa8.06□□□□□ -1.12
TIMP1-204ENST00000445623 TRBV7-6A0A0J9YX20 115 aa8.05□□□□□ -1.12
TIMP1-204ENST00000445623 KRTAP4-16G5E9R7 235 aaPredicted RBP8.05□□□□□ -1.12
TIMP1-204ENST00000445623 PRLHP81277 87 aa8.05□□□□□ -1.12
TIMP1-204ENST00000445623 Q1RN00 199 aa8.05□□□□□ -1.12
TIMP1-204ENST00000445623 KRTAP17-1Q9BYP8 105 aa8.05□□□□□ -1.12
TIMP1-204ENST00000445623 A0A1B0GWB2 263 aa8.04□□□□□ -1.12
TIMP1-204ENST00000445623 B5MCH6 92 aa8.04□□□□□ -1.12
TIMP1-204ENST00000445623 H7C2G1 150 aa8.04□□□□□ -1.12
TIMP1-204ENST00000445623 VAMP3Q15836 100 aa8.04□□□□□ -1.12
TIMP1-204ENST00000445623 Q6ZRX8 168 aa8.04□□□□□ -1.12
TIMP1-204ENST00000445623 KRTAP13-1Q8IUC0 172 aa8.04□□□□□ -1.12
TIMP1-204ENST00000445623 COX7BP24311 80 aa8.03□□□□□ -1.12
TIMP1-204ENST00000445623 ELOF1P60002 83 aaKnown RBP8.02□□□□□ -1.13
TIMP1-204ENST00000445623 HIGD2AQ9BW72 106 aa8.02□□□□□ -1.13
TIMP1-204ENST00000445623 K7ERJ3 54 aa8.01□□□□□ -1.13
TIMP1-204ENST00000445623 INAFM2P0DMQ5 153 aa8.01□□□□□ -1.13
TIMP1-204ENST00000445623 DHRS4-AS1Q9P1J3 65 aa8.01□□□□□ -1.13
TIMP1-204ENST00000445623 BATFQ16520 125 aa8□□□□□ -1.13
TIMP1-204ENST00000445623 KRTAP4-5Q9BYR2 181 aa7.99□□□□□ -1.13
TIMP1-204ENST00000445623 SRRM2Q9UQ35 2752 aaKnown RBP7.99□□□□□ -1.13
TIMP1-204ENST00000445623 SLC25A20O43772 301 aa7.98□□□□□ -1.13
TIMP1-204ENST00000445623 SMCR5Q8TEV8 140 aa7.98□□□□□ -1.13
TIMP1-204ENST00000445623 ZNF706Q9Y5V0 76 aaPredicted RBP7.98□□□□□ -1.13
TIMP1-204ENST00000445623 H0YGX0 51 aa7.97□□□□□ -1.13
TIMP1-204ENST00000445623 COX6CP09669 75 aa7.97□□□□□ -1.13
TIMP1-204ENST00000445623 PSMB2P49721 201 aa7.97□□□□□ -1.13
TIMP1-204ENST00000445623 Q9BRP9 147 aa7.97□□□□□ -1.13
TIMP1-204ENST00000445623 PCP4L1A6NKN8 68 aa7.96□□□□□ -1.14
TIMP1-204ENST00000445623 SNCGO76070 127 aa7.96□□□□□ -1.14
TIMP1-204ENST00000445623 TSPAN13O95857 204 aa7.96□□□□□ -1.14
TIMP1-204ENST00000445623 TRIAP1O43715 76 aa7.94□□□□□ -1.14
TIMP1-204ENST00000445623 PKHD1L1Q86WI1 4243 aa7.94□□□□□ -1.14
TIMP1-204ENST00000445623 LINC00575Q6W349 94 aa7.93□□□□□ -1.14
TIMP1-204ENST00000445623 hADV29S1A0JD25 119 aa7.92□□□□□ -1.14
TIMP1-204ENST00000445623 ERC2-IT1O76042 136 aa7.92□□□□□ -1.14
TIMP1-204ENST00000445623 SCGB1C2P0DMR2 95 aa7.92□□□□□ -1.14
TIMP1-204ENST00000445623 SPRR4Q96PI1 79 aa7.92□□□□□ -1.14
TIMP1-204ENST00000445623 SNHG12Q9BXW3 62 aa7.91□□□□□ -1.14
TIMP1-204ENST00000445623 A0A1B0GX51 115 aa7.9□□□□□ -1.14
TIMP1-204ENST00000445623 LYRM7Q5U5X0 104 aa7.9□□□□□ -1.14
TIMP1-204ENST00000445623 OXTP01178 125 aa7.89□□□□□ -1.15
TIMP1-204ENST00000445623 KRTAP1-4P0C5Y4 121 aa7.89□□□□□ -1.15
TIMP1-204ENST00000445623 FAM229BQ4G0N7 80 aa7.89□□□□□ -1.15
TIMP1-204ENST00000445623 GAGE2AQ6NT46 116 aa7.89□□□□□ -1.15
TIMP1-204ENST00000445623 ABCA13Q86UQ4 5058 aa7.89□□□□□ -1.15
TIMP1-204ENST00000445623 COL5A1-AS1Q5SY13 56 aa7.88□□□□□ -1.15
TIMP1-204ENST00000445623 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.88□□□□□ -1.15
TIMP1-204ENST00000445623 FLG2Q5D862 2391 aaPredicted RBP7.88□□□□□ -1.15
TIMP1-204ENST00000445623 CRYGAP11844 174 aa7.87□□□□□ -1.15
TIMP1-204ENST00000445623 LINC00483Q53H64 154 aa7.87□□□□□ -1.15
TIMP1-204ENST00000445623 Q6ZQY7 126 aa7.87□□□□□ -1.15
TIMP1-204ENST00000445623 ST20-AS1Q8NBB2 130 aa7.87□□□□□ -1.15
TIMP1-204ENST00000445623 LINC01600Q96MT4 127 aa7.87□□□□□ -1.15
TIMP1-204ENST00000445623 TEX49A0A1B0GTD5 131 aa7.86□□□□□ -1.15
TIMP1-204ENST00000445623 C9orf118A6NHY6 69 aa7.86□□□□□ -1.15
TIMP1-204ENST00000445623 DNAL4O96015 105 aa7.86□□□□□ -1.15
TIMP1-204ENST00000445623 GHRHP01286 108 aa7.86□□□□□ -1.15
TIMP1-204ENST00000445623 CLEC2BQ92478 149 aa7.86□□□□□ -1.15
TIMP1-204ENST00000445623 FAM218AQ96MZ4 157 aa7.86□□□□□ -1.15
TIMP1-204ENST00000445623 KRTAP29-1A8MX34 341 aaPredicted RBP7.85□□□□□ -1.15
TIMP1-204ENST00000445623 H3BUT2 72 aa7.85□□□□□ -1.15
TIMP1-204ENST00000445623 TAX1BP3O14907 124 aa7.85□□□□□ -1.15
TIMP1-204ENST00000445623 OCIAD2Q56VL3 154 aa7.85□□□□□ -1.15
TIMP1-204ENST00000445623 DEFB105AQ8NG35 78 aa7.85□□□□□ -1.15
TIMP1-204ENST00000445623 NAA38Q9BRA0 125 aaKnown RBP7.85□□□□□ -1.15
TIMP1-204ENST00000445623 IGLV5-48A0A075B6I7 105 aa7.84□□□□□ -1.15
TIMP1-204ENST00000445623 SPRR1BP22528 89 aa7.84□□□□□ -1.15
TIMP1-204ENST00000445623 ANAPC11Q9NYG5 84 aa7.84□□□□□ -1.15
TIMP1-204ENST00000445623 PRR26Q8N8Z3 221 aa7.83□□□□□ -1.16
TIMP1-204ENST00000445623 PPDPFLQ8WWR9 84 aa7.83□□□□□ -1.16
TIMP1-204ENST00000445623 LAMTOR3Q9UHA4 124 aa7.83□□□□□ -1.16
TIMP1-204ENST00000445623 LST1O00453 97 aa7.82□□□□□ -1.16
TIMP1-204ENST00000445623 TRACP01848 142 aa7.82□□□□□ -1.16
TIMP1-204ENST00000445623 ATXN8Q156A1 80 aa7.82□□□□□ -1.16
TIMP1-204ENST00000445623 TRBV20-1A0A075B6N2 111 aa7.81□□□□□ -1.16
TIMP1-204ENST00000445623 A0A087X002 238 aa7.81□□□□□ -1.16
TIMP1-204ENST00000445623 A0A1W2PPM0 123 aa7.81□□□□□ -1.16
TIMP1-204ENST00000445623 H3BQ85 93 aa7.81□□□□□ -1.16
TIMP1-204ENST00000445623 J3QL48 77 aa7.81□□□□□ -1.16
TIMP1-204ENST00000445623 FABP2P12104 132 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms