RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 NDUFC2O95298 119 aa7.59□□□□□ -1.19
HMGN1-208ENST00000443046 ZNF73O43830 326 aaPredicted RBP7.58□□□□□ -1.2
HMGN1-208ENST00000443046 CD164Q04900 197 aa7.58□□□□□ -1.2
HMGN1-208ENST00000443046 TMEM218A2RU14 115 aa7.57□□□□□ -1.2
HMGN1-208ENST00000443046 S100A7L2Q5SY68 101 aa7.57□□□□□ -1.2
HMGN1-208ENST00000443046 Q5XG85 94 aa7.57□□□□□ -1.2
HMGN1-208ENST00000443046 TSPEAR-AS2P59090 65 aa7.56□□□□□ -1.2
HMGN1-208ENST00000443046 C1orf195Q5TG92 126 aa7.55□□□□□ -1.2
HMGN1-208ENST00000443046 SLC25A34Q6PIV7 304 aa7.55□□□□□ -1.2
HMGN1-208ENST00000443046 IFI27L1Q96BM0 104 aa7.55□□□□□ -1.2
HMGN1-208ENST00000443046 RPS10P5Q9NQ39 176 aa7.55□□□□□ -1.2
HMGN1-208ENST00000443046 UQCC3Q6UW78 93 aa7.54□□□□□ -1.2
HMGN1-208ENST00000443046 KRTAP9-8Q9BYQ0 159 aa7.54□□□□□ -1.2
HMGN1-208ENST00000443046 TRAPPC1Q9Y5R8 145 aa7.54□□□□□ -1.2
HMGN1-208ENST00000443046 MACF1Q9UPN3 7388 aaKnown RBP7.53□□□□□ -1.2
HMGN1-208ENST00000443046 LAMTOR3Q9UHA4 124 aa7.53□□□□□ -1.2
HMGN1-208ENST00000443046 SYNE2Q8WXH0 6885 aaKnown RBP7.53□□□□□ -1.2
HMGN1-208ENST00000443046 EIF4EBP3O60516 100 aaPredicted RBP7.52□□□□□ -1.21
HMGN1-208ENST00000443046 CFC1P0CG37 223 aa7.52□□□□□ -1.21
HMGN1-208ENST00000443046 CLLU1Q5K131 121 aa7.52□□□□□ -1.21
HMGN1-208ENST00000443046 LEPROTO15243 131 aa7.51□□□□□ -1.21
HMGN1-208ENST00000443046 IFITM2Q01629 132 aa7.51□□□□□ -1.21
HMGN1-208ENST00000443046 SOSTDC1Q6X4U4 206 aa7.51□□□□□ -1.21
HMGN1-208ENST00000443046 MIEN1Q9BRT3 115 aa7.51□□□□□ -1.21
HMGN1-208ENST00000443046 PRO1933Q9H354 126 aa7.5□□□□□ -1.21
HMGN1-208ENST00000443046 DHRS4-AS1Q9P1J3 65 aa7.5□□□□□ -1.21
HMGN1-208ENST00000443046 H7C2G1 150 aa7.49□□□□□ -1.21
HMGN1-208ENST00000443046 HINT1P49773 126 aaPredicted RBP7.49□□□□□ -1.21
HMGN1-208ENST00000443046 CHCHD1Q96BP2 118 aaKnown RBP7.49□□□□□ -1.21
HMGN1-208ENST00000443046 J3QQQ9 107 aa7.48□□□□□ -1.21
HMGN1-208ENST00000443046 SMIM29Q86T20 159 aa7.48□□□□□ -1.21
HMGN1-208ENST00000443046 COMMD7Q86VX2 200 aa7.48□□□□□ -1.21
HMGN1-208ENST00000443046 NMUP48645 174 aa7.47□□□□□ -1.21
HMGN1-208ENST00000443046 SMCPP49901 116 aaPredicted RBP7.47□□□□□ -1.21
HMGN1-208ENST00000443046 C10orf91Q5T1B1 145 aa7.47□□□□□ -1.21
HMGN1-208ENST00000443046 ADAMTSL4-AS1Q5T5F5 129 aa7.47□□□□□ -1.21
HMGN1-208ENST00000443046 CBY1Q9Y3M2 126 aa7.47□□□□□ -1.21
HMGN1-208ENST00000443046 RHEBQ15382 184 aa7.46□□□□□ -1.22
HMGN1-208ENST00000443046 Q1RN00 199 aa7.45□□□□□ -1.22
HMGN1-208ENST00000443046 AKR1D1P51857 326 aa7.44□□□□□ -1.22
HMGN1-208ENST00000443046 ELOF1P60002 83 aaKnown RBP7.43□□□□□ -1.22
HMGN1-208ENST00000443046 NPC2P61916 151 aa7.43□□□□□ -1.22
HMGN1-208ENST00000443046 Q6Q795 121 aa7.43□□□□□ -1.22
HMGN1-208ENST00000443046 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
HMGN1-208ENST00000443046 TEX49A0A1B0GTD5 131 aa7.42□□□□□ -1.22
HMGN1-208ENST00000443046 PLNP26678 52 aa7.42□□□□□ -1.22
HMGN1-208ENST00000443046 A0A0G2JQZ4 141 aa7.41□□□□□ -1.22
HMGN1-208ENST00000443046 A0A0J9YXY3 114 aa7.41□□□□□ -1.22
HMGN1-208ENST00000443046 TAL2Q16559 108 aa7.41□□□□□ -1.22
HMGN1-208ENST00000443046 H0Y8G0 127 aa7.4□□□□□ -1.22
HMGN1-208ENST00000443046 LGALS3P17931 250 aaKnown RBP7.4□□□□□ -1.22
HMGN1-208ENST00000443046 DEFB105AQ8NG35 78 aa7.4□□□□□ -1.22
HMGN1-208ENST00000443046 SPANXCQ9NY87 97 aa7.4□□□□□ -1.22
HMGN1-208ENST00000443046 COX7BP24311 80 aa7.39□□□□□ -1.23
HMGN1-208ENST00000443046 IGLV5-48A0A075B6I7 105 aa7.38□□□□□ -1.23
HMGN1-208ENST00000443046 HERVK_113P61574 105 aa7.38□□□□□ -1.23
HMGN1-208ENST00000443046 OR13C6PQ8NH95 151 aa7.38□□□□□ -1.23
HMGN1-208ENST00000443046 LINC00308Q8TCZ7 52 aa7.38□□□□□ -1.23
HMGN1-208ENST00000443046 LITAFQ99732 161 aa7.38□□□□□ -1.23
HMGN1-208ENST00000443046 HSBP1O75506 76 aa7.37□□□□□ -1.23
HMGN1-208ENST00000443046 C6orf99Q4VX62 202 aa7.37□□□□□ -1.23
HMGN1-208ENST00000443046 Q75L30 129 aa7.37□□□□□ -1.23
HMGN1-208ENST00000443046 SPANXDQ9BXN6 97 aa7.37□□□□□ -1.23
HMGN1-208ENST00000443046 DPM2O94777 84 aa7.36□□□□□ -1.23
HMGN1-208ENST00000443046 TCL1BO95988 128 aa7.36□□□□□ -1.23
HMGN1-208ENST00000443046 MT2AP02795 61 aa7.36□□□□□ -1.23
HMGN1-208ENST00000443046 ATP11AUNQ6ZP68 121 aa7.36□□□□□ -1.23
HMGN1-208ENST00000443046 TRBV7-6A0A0J9YX20 115 aa7.35□□□□□ -1.23
HMGN1-208ENST00000443046 YPEL4Q96NS1 127 aa7.35□□□□□ -1.23
HMGN1-208ENST00000443046 C20orf202A1L168 122 aa7.34□□□□□ -1.23
HMGN1-208ENST00000443046 LEPROTL1O95214 131 aa7.34□□□□□ -1.23
HMGN1-208ENST00000443046 IGKCP01834 107 aa7.34□□□□□ -1.23
HMGN1-208ENST00000443046 LINC00310P59036 64 aa7.33□□□□□ -1.24
HMGN1-208ENST00000443046 PMCHL2Q9BQD1 86 aa7.33□□□□□ -1.24
HMGN1-208ENST00000443046 E9PLD3 99 aa7.32□□□□□ -1.24
HMGN1-208ENST00000443046 KRTAP9-3Q9BYQ3 159 aa7.32□□□□□ -1.24
HMGN1-208ENST00000443046 TIMM17BO60830 172 aa7.31□□□□□ -1.24
HMGN1-208ENST00000443046 LINC00518Q8N0U6 118 aa7.31□□□□□ -1.24
HMGN1-208ENST00000443046 MT1FP04733 61 aa7.3□□□□□ -1.24
HMGN1-208ENST00000443046 OBSCN-AS1Q96MR7 158 aa7.3□□□□□ -1.24
HMGN1-208ENST00000443046 A0A1B0GWB2 263 aa7.28□□□□□ -1.24
HMGN1-208ENST00000443046 PCP2Q8IVA1 136 aa7.28□□□□□ -1.24
HMGN1-208ENST00000443046 HSPB8Q9UJY1 196 aa7.28□□□□□ -1.24
HMGN1-208ENST00000443046 SERF1AO75920 110 aa7.27□□□□□ -1.25
HMGN1-208ENST00000443046 KRTAP4-8Q9BYQ9 185 aa7.26□□□□□ -1.25
HMGN1-208ENST00000443046 APOC3P02656 99 aa7.25□□□□□ -1.25
HMGN1-208ENST00000443046 FABP4P15090 132 aa7.25□□□□□ -1.25
HMGN1-208ENST00000443046 SNAPINO95295 136 aa7.24□□□□□ -1.25
HMGN1-208ENST00000443046 TRBV7-7A0A0K0K1E9 115 aa7.23□□□□□ -1.25
HMGN1-208ENST00000443046 C20orf166-AS1Q96NR2 134 aa7.23□□□□□ -1.25
HMGN1-208ENST00000443046 A4D1N5 150 aa7.22□□□□□ -1.25
HMGN1-208ENST00000443046 SVBPQ8N300 66 aa7.22□□□□□ -1.25
HMGN1-208ENST00000443046 TRBV20-1A0A075B6N2 111 aa7.21□□□□□ -1.26
HMGN1-208ENST00000443046 KRTAP19-6Q3LI70 58 aa7.21□□□□□ -1.26
HMGN1-208ENST00000443046 A8MUU9 505 aa7.2□□□□□ -1.26
HMGN1-208ENST00000443046 TRGC2P03986 189 aa7.2□□□□□ -1.26
HMGN1-208ENST00000443046 KRTAP10-10P60014 251 aa7.2□□□□□ -1.26
HMGN1-208ENST00000443046 Q96NJ1 140 aa7.2□□□□□ -1.26
HMGN1-208ENST00000443046 ZNF815PA8K554 130 aa7.19□□□□□ -1.26
HMGN1-208ENST00000443046 Q6JHZ5 121 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms