RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 KCNQ1DNQ9H478 68 aa4.55□□□□□ -1.68
NIF3L1-208ENST00000436412 SSPOA2VEC9 5147 aa4.54□□□□□ -1.68
NIF3L1-208ENST00000436412 IGLV9-49A0A0B4J1Y8 123 aa4.54□□□□□ -1.68
NIF3L1-208ENST00000436412 ETDCA0A1B0GVM5 59 aa4.54□□□□□ -1.68
NIF3L1-208ENST00000436412 ADCYAP1P18509 176 aa4.54□□□□□ -1.68
NIF3L1-208ENST00000436412 UBE2V1Q13404 147 aa4.54□□□□□ -1.68
NIF3L1-208ENST00000436412 KRTAP4-16G5E9R7 235 aaPredicted RBP4.53□□□□□ -1.68
NIF3L1-208ENST00000436412 COX6B2Q6YFQ2 88 aa4.53□□□□□ -1.68
NIF3L1-208ENST00000436412 IGLC3P0DOY3 106 aa4.52□□□□□ -1.69
NIF3L1-208ENST00000436412 S100A12P80511 92 aa4.52□□□□□ -1.69
NIF3L1-208ENST00000436412 ZNF625Q96I27 306 aaPredicted RBP4.52□□□□□ -1.69
NIF3L1-208ENST00000436412 USH2AO75445 5202 aa4.51□□□□□ -1.69
NIF3L1-208ENST00000436412 LINC01546A6NGU7 62 aa4.51□□□□□ -1.69
NIF3L1-208ENST00000436412 LINC00158P58513 81 aa4.51□□□□□ -1.69
NIF3L1-208ENST00000436412 TRAV9-1A0A075B6T8 112 aa4.5□□□□□ -1.69
NIF3L1-208ENST00000436412 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
NIF3L1-208ENST00000436412 MT-ND4LP03901 98 aa4.5□□□□□ -1.69
NIF3L1-208ENST00000436412 ZNF22P17026 224 aaPredicted RBP4.5□□□□□ -1.69
NIF3L1-208ENST00000436412 LIMD2Q9BT23 127 aa4.5□□□□□ -1.69
NIF3L1-208ENST00000436412 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
NIF3L1-208ENST00000436412 SEC61GP60059 68 aa4.49□□□□□ -1.69
NIF3L1-208ENST00000436412 HERV-K104P63124 156 aa4.49□□□□□ -1.69
NIF3L1-208ENST00000436412 FA2HQ7L5A8 372 aa4.49□□□□□ -1.69
NIF3L1-208ENST00000436412 BOD1L2Q8IYS8 172 aa4.49□□□□□ -1.69
NIF3L1-208ENST00000436412 TRBV10-3A0A0K0K1G6 114 aa4.48□□□□□ -1.69
NIF3L1-208ENST00000436412 C9orf92A6NGG3 77 aa4.48□□□□□ -1.69
NIF3L1-208ENST00000436412 ERC2-IT1O76042 136 aa4.48□□□□□ -1.69
NIF3L1-208ENST00000436412 C9orf153Q5TBE3 101 aa4.48□□□□□ -1.69
NIF3L1-208ENST00000436412 CFC1P0CG37 223 aa4.47□□□□□ -1.69
NIF3L1-208ENST00000436412 KIAA1644Q3SXP7 199 aa4.47□□□□□ -1.69
NIF3L1-208ENST00000436412 NCR3O14931 201 aa4.46□□□□□ -1.7
NIF3L1-208ENST00000436412 IGLV6-57P01721 117 aa4.46□□□□□ -1.7
NIF3L1-208ENST00000436412 NDUFA6P56556 154 aa4.46□□□□□ -1.7
NIF3L1-208ENST00000436412 JOSD1Q15040 202 aaPredicted RBP4.46□□□□□ -1.7
NIF3L1-208ENST00000436412 Q6ZRX8 168 aa4.46□□□□□ -1.7
NIF3L1-208ENST00000436412 Q9BRP9 147 aa4.46□□□□□ -1.7
NIF3L1-208ENST00000436412 CBY1Q9Y3M2 126 aa4.46□□□□□ -1.7
NIF3L1-208ENST00000436412 LINC00587B1AMM8 73 aa4.45□□□□□ -1.7
NIF3L1-208ENST00000436412 TMEM170BQ5T4T1 132 aa4.45□□□□□ -1.7
NIF3L1-208ENST00000436412 SMCO4Q9NRQ5 59 aa4.45□□□□□ -1.7
NIF3L1-208ENST00000436412 C11orf86A6NJI1 115 aa4.44□□□□□ -1.7
NIF3L1-208ENST00000436412 SMIM13P0DJ93 91 aa4.44□□□□□ -1.7
NIF3L1-208ENST00000436412 DDTP30046 118 aa4.44□□□□□ -1.7
NIF3L1-208ENST00000436412 MIR7-3HGQ8N6C7 128 aa4.44□□□□□ -1.7
NIF3L1-208ENST00000436412 TRBV10-2A0A0K0K1G8 114 aa4.43□□□□□ -1.7
NIF3L1-208ENST00000436412 RPL37P61927 97 aaKnown RBP4.43□□□□□ -1.7
NIF3L1-208ENST00000436412 MEIG1Q5JSS6 88 aa4.43□□□□□ -1.7
NIF3L1-208ENST00000436412 SLC25A34Q6PIV7 304 aa4.43□□□□□ -1.7
NIF3L1-208ENST00000436412 BAGE3Q86Y29 109 aa4.43□□□□□ -1.7
NIF3L1-208ENST00000436412 PAM16Q9Y3D7 125 aa4.43□□□□□ -1.7
NIF3L1-208ENST00000436412 LOC107984156A0A0G2JMH3 177 aa4.42□□□□□ -1.7
NIF3L1-208ENST00000436412 CD164Q04900 197 aa4.42□□□□□ -1.7
NIF3L1-208ENST00000436412 ARL17AQ8IVW1 177 aa4.42□□□□□ -1.7
NIF3L1-208ENST00000436412 MAP1LC3CQ9BXW4 147 aa4.42□□□□□ -1.7
NIF3L1-208ENST00000436412 TMEM223A0PJW6 202 aa4.41□□□□□ -1.7
NIF3L1-208ENST00000436412 A0A096LNJ9 63 aa4.4□□□□□ -1.71
NIF3L1-208ENST00000436412 HBDP02042 147 aa4.4□□□□□ -1.71
NIF3L1-208ENST00000436412 SPRR1BP22528 89 aa4.4□□□□□ -1.71
NIF3L1-208ENST00000436412 COX19Q49B96 90 aa4.4□□□□□ -1.71
NIF3L1-208ENST00000436412 Q5XG85 94 aa4.4□□□□□ -1.71
NIF3L1-208ENST00000436412 HRCT1Q6UXD1 115 aa4.4□□□□□ -1.71
NIF3L1-208ENST00000436412 SLC7A5P1Q8MH63 180 aa4.4□□□□□ -1.71
NIF3L1-208ENST00000436412 SPANXB1Q9NS25 103 aaPredicted RBP4.4□□□□□ -1.71
NIF3L1-208ENST00000436412 Q75L30 129 aa4.39□□□□□ -1.71
NIF3L1-208ENST00000436412 ST20-AS1Q8NBB2 130 aa4.39□□□□□ -1.71
NIF3L1-208ENST00000436412 LAMTOR3Q9UHA4 124 aa4.39□□□□□ -1.71
NIF3L1-208ENST00000436412 TRAV23DV6A0A075B6W5 121 aa4.38□□□□□ -1.71
NIF3L1-208ENST00000436412 MYMXA0A1B0GTQ4 84 aa4.38□□□□□ -1.71
NIF3L1-208ENST00000436412 ZNF73O43830 326 aaPredicted RBP4.38□□□□□ -1.71
NIF3L1-208ENST00000436412 LINC00614P0C842 121 aa4.38□□□□□ -1.71
NIF3L1-208ENST00000436412 HINT1P49773 126 aaPredicted RBP4.38□□□□□ -1.71
NIF3L1-208ENST00000436412 FABP9Q0Z7S8 132 aa4.38□□□□□ -1.71
NIF3L1-208ENST00000436412 VAMP3Q15836 100 aa4.38□□□□□ -1.71
NIF3L1-208ENST00000436412 S100A7L2Q5SY68 101 aa4.38□□□□□ -1.71
NIF3L1-208ENST00000436412 NDUFC2O95298 119 aa4.37□□□□□ -1.71
NIF3L1-208ENST00000436412 C1orf195Q5TG92 126 aa4.37□□□□□ -1.71
NIF3L1-208ENST00000436412 SEC11CQ9BY50 192 aa4.37□□□□□ -1.71
NIF3L1-208ENST00000436412 TRAV12-1A0A0B4J245 112 aa4.36□□□□□ -1.71
NIF3L1-208ENST00000436412 H7C2G1 150 aa4.36□□□□□ -1.71
NIF3L1-208ENST00000436412 S100PP25815 95 aa4.36□□□□□ -1.71
NIF3L1-208ENST00000436412 IFITM2Q01629 132 aa4.36□□□□□ -1.71
NIF3L1-208ENST00000436412 Q6Q795 121 aa4.36□□□□□ -1.71
NIF3L1-208ENST00000436412 COMMD7Q86VX2 200 aa4.36□□□□□ -1.71
NIF3L1-208ENST00000436412 MIEN1Q9BRT3 115 aa4.36□□□□□ -1.71
NIF3L1-208ENST00000436412 PRO1933Q9H354 126 aa4.36□□□□□ -1.71
NIF3L1-208ENST00000436412 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
NIF3L1-208ENST00000436412 MACF1Q9UPN3 7388 aaKnown RBP4.35□□□□□ -1.71
NIF3L1-208ENST00000436412 DHRS4-AS1Q9P1J3 65 aa4.35□□□□□ -1.71
NIF3L1-208ENST00000436412 PMCHL1Q16048 86 aa4.34□□□□□ -1.71
NIF3L1-208ENST00000436412 C18orf32Q8TCD1 76 aa4.34□□□□□ -1.71
NIF3L1-208ENST00000436412 AKR1D1P51857 326 aa4.33□□□□□ -1.72
NIF3L1-208ENST00000436412 ATP11AUNQ6ZP68 121 aa4.33□□□□□ -1.72
NIF3L1-208ENST00000436412 IFI27L1Q96BM0 104 aa4.32□□□□□ -1.72
NIF3L1-208ENST00000436412 C20orf202A1L168 122 aa4.31□□□□□ -1.72
NIF3L1-208ENST00000436412 LEPROTO15243 131 aa4.31□□□□□ -1.72
NIF3L1-208ENST00000436412 TCL1BO95988 128 aa4.31□□□□□ -1.72
NIF3L1-208ENST00000436412 NMUP48645 174 aa4.31□□□□□ -1.72
NIF3L1-208ENST00000436412 C10orf91Q5T1B1 145 aa4.31□□□□□ -1.72
NIF3L1-208ENST00000436412 LINC00846Q9NV44 126 aa4.31□□□□□ -1.72
NIF3L1-208ENST00000436412 TEX49A0A1B0GTD5 131 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms