RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 A0A1W2PNM2 257 aa14.72□□□□□ -0.05
TOP2B-204ENST00000435706 NBDYA0A0U1RRE5 68 aa14.71□□□□□ -0.05
TOP2B-204ENST00000435706 SPANXA2-OT1Q8N9U9 137 aa14.7□□□□□ -0.06
TOP2B-204ENST00000435706 LINC00612Q8N6U2 182 aa14.7□□□□□ -0.06
TOP2B-204ENST00000435706 A0A1B0GVX0 72 aa14.69□□□□□ -0.06
TOP2B-204ENST00000435706 SSBP3-AS1Q7Z2R9 100 aa14.69□□□□□ -0.06
TOP2B-204ENST00000435706 Q96NJ1 140 aa14.69□□□□□ -0.06
TOP2B-204ENST00000435706 POLQO75417 2590 aa14.68□□□□□ -0.06
TOP2B-204ENST00000435706 GOLGB1Q14789 3259 aaKnown RBP14.68□□□□□ -0.06
TOP2B-204ENST00000435706 OCR1Q9BZK8 76 aa14.66□□□□□ -0.06
TOP2B-204ENST00000435706 C19orf73Q9NVV2 129 aa14.66□□□□□ -0.06
TOP2B-204ENST00000435706 PLA2G2DQ9UNK4 145 aa14.66□□□□□ -0.06
TOP2B-204ENST00000435706 Q1T7F1 81 aa14.64□□□□□ -0.07
TOP2B-204ENST00000435706 CDC42SE1Q9NRR8 79 aa14.64□□□□□ -0.07
TOP2B-204ENST00000435706 TLX1NBP0CAT3 122 aa14.63□□□□□ -0.07
TOP2B-204ENST00000435706 TYMSOSQ8TAI1 123 aa14.63□□□□□ -0.07
TOP2B-204ENST00000435706 ANKRD17O75179 2603 aaKnown RBP14.62□□□□□ -0.07
TOP2B-204ENST00000435706 DSCR10P59022 87 aa14.62□□□□□ -0.07
TOP2B-204ENST00000435706 SPTBN4Q9H254 2564 aa14.61□□□□□ -0.07
TOP2B-204ENST00000435706 Q5XG85 94 aa14.61□□□□□ -0.07
TOP2B-204ENST00000435706 CHD8Q9HCK8 2581 aa14.59□□□□□ -0.07
TOP2B-204ENST00000435706 IGLV5-48A0A075B6I7 105 aa14.59□□□□□ -0.07
TOP2B-204ENST00000435706 FAM104AQ969W3 186 aa14.59□□□□□ -0.07
TOP2B-204ENST00000435706 CYSTM1Q9H1C7 97 aa14.54□□□□□ -0.08
TOP2B-204ENST00000435706 A0A096LNT2 108 aa14.52□□□□□ -0.09
TOP2B-204ENST00000435706 KRTAP24-1Q3LI83 254 aa14.5□□□□□ -0.09
TOP2B-204ENST00000435706 ACANP16112 2415 aa14.49□□□□□ -0.09
TOP2B-204ENST00000435706 PRRC2CQ9Y520 2896 aaKnown RBP14.47□□□□□ -0.09
TOP2B-204ENST00000435706 FP248Q71RG6 208 aaPredicted RBP14.44□□□□□ -0.1
TOP2B-204ENST00000435706 ZNF861PO60384 105 aa14.44□□□□□ -0.1
TOP2B-204ENST00000435706 FAM229BQ4G0N7 80 aa14.43□□□□□ -0.1
TOP2B-204ENST00000435706 DNAH12Q6ZR08 3092 aa14.41□□□□□ -0.1
TOP2B-204ENST00000435706 CRIPTQ9P021 101 aa14.4□□□□□ -0.1
TOP2B-204ENST00000435706 PLA2G1BP04054 148 aaKnown RBP14.39□□□□□ -0.11
TOP2B-204ENST00000435706 SPRR4Q96PI1 79 aa14.39□□□□□ -0.11
TOP2B-204ENST00000435706 IGLV5-37A0A075B6J1 123 aa14.38□□□□□ -0.11
TOP2B-204ENST00000435706 CASC10Q5T4H9 136 aa14.38□□□□□ -0.11
TOP2B-204ENST00000435706 KRTAP10-11P60412 298 aa14.37□□□□□ -0.11
TOP2B-204ENST00000435706 ANAPC11Q9NYG5 84 aa14.37□□□□□ -0.11
TOP2B-204ENST00000435706 C9orf163Q8N9P6 203 aa14.37□□□□□ -0.11
TOP2B-204ENST00000435706 F8P00451 2351 aa14.36□□□□□ -0.11
TOP2B-204ENST00000435706 RBM12B-AS1Q9P1G2 102 aa14.36□□□□□ -0.11
TOP2B-204ENST00000435706 APLNQ9ULZ1 77 aa14.36□□□□□ -0.11
TOP2B-204ENST00000435706 PRR26Q8N8Z3 221 aa14.36□□□□□ -0.11
TOP2B-204ENST00000435706 KRTAP10-3P60369 221 aa14.35□□□□□ -0.11
TOP2B-204ENST00000435706 Q75L30 129 aa14.35□□□□□ -0.11
TOP2B-204ENST00000435706 IGLV7-46A0A075B6I9 117 aa14.32□□□□□ -0.12
TOP2B-204ENST00000435706 CNBPP62633 177 aaKnown RBP14.28□□□□□ -0.12
TOP2B-204ENST00000435706 Q8N9P0 234 aaPredicted RBP14.26□□□□□ -0.13
TOP2B-204ENST00000435706 OXTP01178 125 aa14.25□□□□□ -0.13
TOP2B-204ENST00000435706 PSORS1C2Q9UIG4 136 aa14.23□□□□□ -0.13
TOP2B-204ENST00000435706 Q8NDZ9 215 aa14.21□□□□□ -0.13
TOP2B-204ENST00000435706 A0A087WTM6 91 aa14.21□□□□□ -0.13
TOP2B-204ENST00000435706 Q8N1X5 172 aa14.21□□□□□ -0.14
TOP2B-204ENST00000435706 K7EIL1 84 aa14.2□□□□□ -0.14
TOP2B-204ENST00000435706 LINC00304Q8N9R0 145 aa14.2□□□□□ -0.14
TOP2B-204ENST00000435706 IGLV7-43P04211 117 aa14.2□□□□□ -0.14
TOP2B-204ENST00000435706 LINC01558Q9Y6Z2 57 aa14.19□□□□□ -0.14
TOP2B-204ENST00000435706 C9orf92A6NGG3 77 aa14.19□□□□□ -0.14
TOP2B-204ENST00000435706 CR1P17927 2039 aa14.18□□□□□ -0.14
TOP2B-204ENST00000435706 BPTFQ12830 3046 aa14.17□□□□□ -0.14
TOP2B-204ENST00000435706 Q5VV11 94 aa14.15□□□□□ -0.14
TOP2B-204ENST00000435706 CEP350Q5VT06 3117 aa14.12□□□□□ -0.15
TOP2B-204ENST00000435706 LINC01554Q52M75 96 aa14.11□□□□□ -0.15
TOP2B-204ENST00000435706 A0A0D9SG42 100 aa14.09□□□□□ -0.15
TOP2B-204ENST00000435706 MMP24-AS1A0A0U1RRL7 71 aa14.09□□□□□ -0.15
TOP2B-204ENST00000435706 HRES1P13985 223 aa14.09□□□□□ -0.15
TOP2B-204ENST00000435706 PRAC1Q96KF2 57 aa14.06□□□□□ -0.16
TOP2B-204ENST00000435706 KRTAP1-3Q8IUG1 177 aa14□□□□□ -0.17
TOP2B-204ENST00000435706 SPRR1AP35321 89 aa14□□□□□ -0.17
TOP2B-204ENST00000435706 FASNP49327 2511 aaKnown RBP13.98□□□□□ -0.17
TOP2B-204ENST00000435706 EPG5Q9HCE0 2579 aa13.97□□□□□ -0.17
TOP2B-204ENST00000435706 SPINK7P58062 85 aa13.96□□□□□ -0.18
TOP2B-204ENST00000435706 A0A1B0GU33 70 aa13.95□□□□□ -0.18
TOP2B-204ENST00000435706 WWC2-AS2Q96NR7 200 aa13.95□□□□□ -0.18
TOP2B-204ENST00000435706 H3BS24 57 aa13.94□□□□□ -0.18
TOP2B-204ENST00000435706 USP24Q9UPU5 2620 aa13.92□□□□□ -0.18
TOP2B-204ENST00000435706 KRTAP1-1Q07627 177 aa13.91□□□□□ -0.18
TOP2B-204ENST00000435706 LINC00472Q9H8W2 130 aa13.89□□□□□ -0.19
TOP2B-204ENST00000435706 A0A0C4DFX4 3053 aa13.86□□□□□ -0.19
TOP2B-204ENST00000435706 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.84□□□□□ -0.19
TOP2B-204ENST00000435706 CSAG1Q6PB30 78 aa13.83□□□□□ -0.19
TOP2B-204ENST00000435706 SMR3BP02814 79 aaPredicted RBP13.82□□□□□ -0.2
TOP2B-204ENST00000435706 PCNTO95613 3336 aa13.8□□□□□ -0.2
TOP2B-204ENST00000435706 SPRR1BP22528 89 aa13.8□□□□□ -0.2
TOP2B-204ENST00000435706 C5orf42Q9H799 3197 aa13.78□□□□□ -0.2
TOP2B-204ENST00000435706 CHD7Q9P2D1 2997 aa13.77□□□□□ -0.21
TOP2B-204ENST00000435706 Q5W150 140 aa13.76□□□□□ -0.21
TOP2B-204ENST00000435706 LUZP6Q538Z0 58 aa13.75□□□□□ -0.21
TOP2B-204ENST00000435706 MGAM2Q2M2H8 2515 aa13.74□□□□□ -0.21
TOP2B-204ENST00000435706 COX6B2Q6YFQ2 88 aa13.72□□□□□ -0.21
TOP2B-204ENST00000435706 TNP2Q05952 138 aa13.71□□□□□ -0.21
TOP2B-204ENST00000435706 FLNAP21333 2647 aaKnown RBP13.68□□□□□ -0.22
TOP2B-204ENST00000435706 UTRNP46939 3433 aa13.67□□□□□ -0.22
TOP2B-204ENST00000435706 ZCCHC13Q8WW36 166 aaKnown RBP13.67□□□□□ -0.22
TOP2B-204ENST00000435706 KRTAP26-1Q6PEX3 210 aa13.66□□□□□ -0.22
TOP2B-204ENST00000435706 DMAC1Q96GE9 116 aa13.66□□□□□ -0.22
TOP2B-204ENST00000435706 HECTD1Q9ULT8 2610 aa13.62□□□□□ -0.23
TOP2B-204ENST00000435706 PLAC8Q9NZF1 115 aa13.59□□□□□ -0.23
TOP2B-204ENST00000435706 CFAP54Q96N23 3096 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms