RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 A0A096LNJ9 63 aa7.5□□□□□ -1.21
SCN4A-201ENST00000435607 TM2D3Q9BRN9 247 aa7.5□□□□□ -1.21
SCN4A-201ENST00000435607 K7EQZ3 153 aa7.5□□□□□ -1.21
SCN4A-201ENST00000435607 A0A1B0GVX0 72 aa7.49□□□□□ -1.21
SCN4A-201ENST00000435607 C8orf17Q9NRJ1 99 aa7.49□□□□□ -1.21
SCN4A-201ENST00000435607 A0A087WTM6 91 aa7.49□□□□□ -1.21
SCN4A-201ENST00000435607 LINC00483Q53H64 154 aa7.49□□□□□ -1.21
SCN4A-201ENST00000435607 CDH23Q9H251 3354 aa7.48□□□□□ -1.21
SCN4A-201ENST00000435607 CDC42SE1Q9NRR8 79 aa7.48□□□□□ -1.21
SCN4A-201ENST00000435607 Q6ZSA8 131 aa7.48□□□□□ -1.21
SCN4A-201ENST00000435607 C9orf163Q8N9P6 203 aa7.48□□□□□ -1.21
SCN4A-201ENST00000435607 IGLV1-50A0A075B6I6 118 aa7.48□□□□□ -1.21
SCN4A-201ENST00000435607 FAM168BA1KXE4 195 aa7.48□□□□□ -1.21
SCN4A-201ENST00000435607 RPS28P62857 69 aaKnown RBP7.47□□□□□ -1.21
SCN4A-201ENST00000435607 K7EIL1 84 aa7.47□□□□□ -1.21
SCN4A-201ENST00000435607 LINC00310P59036 64 aa7.47□□□□□ -1.21
SCN4A-201ENST00000435607 ERC2-IT1O76042 136 aa7.46□□□□□ -1.21
SCN4A-201ENST00000435607 KCNQ1DNQ9H478 68 aa7.46□□□□□ -1.21
SCN4A-201ENST00000435607 PRUNE2Q8WUY3 3088 aa7.46□□□□□ -1.22
SCN4A-201ENST00000435607 SPTBN4Q9H254 2564 aa7.45□□□□□ -1.22
SCN4A-201ENST00000435607 PRR15Q8IV56 129 aa7.45□□□□□ -1.22
SCN4A-201ENST00000435607 IGLV7-43P04211 117 aa7.45□□□□□ -1.22
SCN4A-201ENST00000435607 FAM218AQ96MZ4 157 aa7.44□□□□□ -1.22
SCN4A-201ENST00000435607 CAMK2N1Q7Z7J9 78 aa7.44□□□□□ -1.22
SCN4A-201ENST00000435607 LINC00528Q8N1L1 170 aa7.44□□□□□ -1.22
SCN4A-201ENST00000435607 CSNK1G2-AS1Q8NCQ2 148 aa7.43□□□□□ -1.22
SCN4A-201ENST00000435607 IGLV5-48A0A075B6I7 105 aa7.42□□□□□ -1.22
SCN4A-201ENST00000435607 IGFL1Q6UW32 110 aa7.42□□□□□ -1.22
SCN4A-201ENST00000435607 COL4A2P08572 1712 aa7.42□□□□□ -1.22
SCN4A-201ENST00000435607 A0A0D9SG42 100 aa7.41□□□□□ -1.22
SCN4A-201ENST00000435607 C10orf142B7Z368 130 aa7.39□□□□□ -1.23
SCN4A-201ENST00000435607 USP24Q9UPU5 2620 aa7.39□□□□□ -1.23
SCN4A-201ENST00000435607 PSORS1C2Q9UIG4 136 aa7.39□□□□□ -1.23
SCN4A-201ENST00000435607 PLA2G2DQ9UNK4 145 aa7.39□□□□□ -1.23
SCN4A-201ENST00000435607 HRES1P13985 223 aa7.38□□□□□ -1.23
SCN4A-201ENST00000435607 ZNF575Q86XF7 245 aa7.38□□□□□ -1.23
SCN4A-201ENST00000435607 C19orf73Q9NVV2 129 aa7.38□□□□□ -1.23
SCN4A-201ENST00000435607 FAM104AQ969W3 186 aa7.37□□□□□ -1.23
SCN4A-201ENST00000435607 KRTAP10-11P60412 298 aa7.37□□□□□ -1.23
SCN4A-201ENST00000435607 C4orf26Q17RF5 130 aa7.37□□□□□ -1.23
SCN4A-201ENST00000435607 TLX1NBP0CAT3 122 aa7.36□□□□□ -1.23
SCN4A-201ENST00000435607 DNAH14Q0VDD8 3507 aa7.36□□□□□ -1.23
SCN4A-201ENST00000435607 IGLV7-46A0A075B6I9 117 aa7.36□□□□□ -1.23
SCN4A-201ENST00000435607 PCSK5Q92824 1860 aa7.34□□□□□ -1.23
SCN4A-201ENST00000435607 A8MUN3 132 aa7.34□□□□□ -1.23
SCN4A-201ENST00000435607 C15orf56Q8N910 161 aa7.34□□□□□ -1.23
SCN4A-201ENST00000435607 SZT2Q5T011 3432 aa7.33□□□□□ -1.24
SCN4A-201ENST00000435607 RANBP2P49792 3224 aaKnown RBP7.32□□□□□ -1.24
SCN4A-201ENST00000435607 PRR34Q9NV39 138 aa7.32□□□□□ -1.24
SCN4A-201ENST00000435607 SPRR4Q96PI1 79 aa7.32□□□□□ -1.24
SCN4A-201ENST00000435607 UNC80Q8N2C7 3258 aa7.32□□□□□ -1.24
SCN4A-201ENST00000435607 CNBPP62633 177 aaKnown RBP7.3□□□□□ -1.24
SCN4A-201ENST00000435607 Q8N1X5 172 aa7.29□□□□□ -1.24
SCN4A-201ENST00000435607 Q8N377 158 aa7.29□□□□□ -1.24
SCN4A-201ENST00000435607 HTTP42858 3142 aa7.28□□□□□ -1.24
SCN4A-201ENST00000435607 ANAPC11Q9NYG5 84 aa7.28□□□□□ -1.24
SCN4A-201ENST00000435607 CR1P17927 2039 aa7.28□□□□□ -1.24
SCN4A-201ENST00000435607 CD164Q04900 197 aa7.28□□□□□ -1.24
SCN4A-201ENST00000435607 A0A0C4DFX4 3053 aa7.27□□□□□ -1.25
SCN4A-201ENST00000435607 SMCPP49901 116 aaPredicted RBP7.27□□□□□ -1.25
SCN4A-201ENST00000435607 Q1T7F1 81 aa7.25□□□□□ -1.25
SCN4A-201ENST00000435607 SPANXA2-OT1Q8N9U9 137 aa7.24□□□□□ -1.25
SCN4A-201ENST00000435607 LINC00612Q8N6U2 182 aa7.24□□□□□ -1.25
SCN4A-201ENST00000435607 CEP295Q9C0D2 2601 aa7.24□□□□□ -1.25
SCN4A-201ENST00000435607 CSAG1Q6PB30 78 aa7.24□□□□□ -1.25
SCN4A-201ENST00000435607 EYSQ5T1H1 3165 aa7.23□□□□□ -1.25
SCN4A-201ENST00000435607 A0A1W2PNN7 141 aa7.22□□□□□ -1.25
SCN4A-201ENST00000435607 SEC61BP60468 96 aaKnown RBP7.22□□□□□ -1.25
SCN4A-201ENST00000435607 KLK9Q2XQG4 91 aa7.22□□□□□ -1.25
SCN4A-201ENST00000435607 LCA10Q71F78 164 aa7.22□□□□□ -1.25
SCN4A-201ENST00000435607 PRR26Q8N8Z3 221 aa7.22□□□□□ -1.25
SCN4A-201ENST00000435607 PRO0461Q9UI25 63 aa7.22□□□□□ -1.25
SCN4A-201ENST00000435607 KLKP1Q107X0 134 aa7.2□□□□□ -1.26
SCN4A-201ENST00000435607 LITAFQ99732 161 aa7.19□□□□□ -1.26
SCN4A-201ENST00000435607 MGAM2Q2M2H8 2515 aa7.19□□□□□ -1.26
SCN4A-201ENST00000435607 VCANP13611 3396 aa7.19□□□□□ -1.26
SCN4A-201ENST00000435607 FAM229BQ4G0N7 80 aa7.19□□□□□ -1.26
SCN4A-201ENST00000435607 CELSR3Q9NYQ7 3312 aa7.19□□□□□ -1.26
SCN4A-201ENST00000435607 KTN1-AS1Q86SY8 53 aa7.19□□□□□ -1.26
SCN4A-201ENST00000435607 S4R3F8 94 aa7.18□□□□□ -1.26
SCN4A-201ENST00000435607 A0A1B0GU33 70 aa7.18□□□□□ -1.26
SCN4A-201ENST00000435607 CASC10Q5T4H9 136 aa7.17□□□□□ -1.26
SCN4A-201ENST00000435607 CHD7Q9P2D1 2997 aa7.16□□□□□ -1.26
SCN4A-201ENST00000435607 TNP2Q05952 138 aa7.16□□□□□ -1.26
SCN4A-201ENST00000435607 USP34Q70CQ2 3546 aa7.14□□□□□ -1.27
SCN4A-201ENST00000435607 A0A0G2JQZ4 141 aa7.14□□□□□ -1.27
SCN4A-201ENST00000435607 DMAC1Q96GE9 116 aa7.13□□□□□ -1.27
SCN4A-201ENST00000435607 R4GN34 69 aa7.12□□□□□ -1.27
SCN4A-201ENST00000435607 EPG5Q9HCE0 2579 aa7.12□□□□□ -1.27
SCN4A-201ENST00000435607 KRTAP10-3P60369 221 aa7.12□□□□□ -1.27
SCN4A-201ENST00000435607 PLAC4Q8WY50 150 aa7.12□□□□□ -1.27
SCN4A-201ENST00000435607 A0A0A0MQY5 61 aa7.11□□□□□ -1.27
SCN4A-201ENST00000435607 BPTFQ12830 3046 aa7.11□□□□□ -1.27
SCN4A-201ENST00000435607 MYO15AQ9UKN7 3530 aa7.1□□□□□ -1.27
SCN4A-201ENST00000435607 FLNBO75369 2602 aaKnown RBP7.09□□□□□ -1.27
SCN4A-201ENST00000435607 SPTBN5Q9NRC6 3674 aaKnown RBP7.09□□□□□ -1.27
SCN4A-201ENST00000435607 COL6A3P12111 3177 aa7.09□□□□□ -1.27
SCN4A-201ENST00000435607 GIG44P09565 113 aaPredicted RBP7.08□□□□□ -1.28
SCN4A-201ENST00000435607 ZCCHC13Q8WW36 166 aaKnown RBP7.07□□□□□ -1.28
SCN4A-201ENST00000435607 A0A1W2PNM2 257 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms