RNA–Protein interactions for RNA: ENST00000433889.1

SCG2-203, Transcript of secretogranin II, humanhuman

TSL 4

Gene SCG2, Length 544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-203ENST00000433889 FYCO1Q9BQS8 1478 aa-0.13□□□□□ -2.43
SCG2-203ENST00000433889 PIGBOS1A0A0B4J2F0 54 aa-0.13□□□□□ -2.43
SCG2-203ENST00000433889 CLPSL1A2RUU4 121 aa-0.13□□□□□ -2.43
SCG2-203ENST00000433889 PPP1R17O96001 155 aa-0.13□□□□□ -2.43
SCG2-203ENST00000433889 MT1AP04731 61 aa-0.13□□□□□ -2.43
SCG2-203ENST00000433889 ASIPP42127 132 aa-0.13□□□□□ -2.43
SCG2-203ENST00000433889 RPS25P62851 125 aaKnown RBP-0.13□□□□□ -2.43
SCG2-203ENST00000433889 MT1XP80297 61 aa-0.13□□□□□ -2.43
SCG2-203ENST00000433889 SMCO1Q147U7 214 aa-0.13□□□□□ -2.43
SCG2-203ENST00000433889 KRTAP19-8Q3LI54 63 aa-0.13□□□□□ -2.43
SCG2-203ENST00000433889 MT1LQ93083 61 aa-0.13□□□□□ -2.43
SCG2-203ENST00000433889 WNK1Q9H4A3 2382 aa-0.13□□□□□ -2.43
SCG2-203ENST00000433889 CSPG4Q6UVK1 2322 aa-0.14□□□□□ -2.43
SCG2-203ENST00000433889 FANCD2Q9BXW9 1451 aa-0.14□□□□□ -2.43
SCG2-203ENST00000433889 SPAARA0A1B0GVQ0 90 aa-0.14□□□□□ -2.43
SCG2-203ENST00000433889 MT1GP13640 62 aa-0.14□□□□□ -2.43
SCG2-203ENST00000433889 S100A3P33764 101 aa-0.14□□□□□ -2.43
SCG2-203ENST00000433889 HAMPP81172 84 aa-0.14□□□□□ -2.43
SCG2-203ENST00000433889 DEFB109BQ30KR1 87 aa-0.14□□□□□ -2.43
SCG2-203ENST00000433889 AQP10Q96PS8 301 aa-0.14□□□□□ -2.43
SCG2-203ENST00000433889 R4GMQ9 66 aa-0.14□□□□□ -2.43
SCG2-203ENST00000433889 TOP2AP11388 1531 aaKnown RBP-0.14□□□□□ -2.43
SCG2-203ENST00000433889 NSD3Q9BZ95 1437 aa-0.14□□□□□ -2.43
SCG2-203ENST00000433889 FAM186AA6NE01 2351 aa-0.14□□□□□ -2.43
SCG2-203ENST00000433889 MYH4Q9Y623 1939 aa-0.15□□□□□ -2.43
SCG2-203ENST00000433889 CD163L1Q9NR16 1453 aa-0.15□□□□□ -2.43
SCG2-203ENST00000433889 KNL1Q8NG31 2342 aa-0.15□□□□□ -2.43
SCG2-203ENST00000433889 CTXND1A0A1B0GTU2 59 aa-0.15□□□□□ -2.43
SCG2-203ENST00000433889 KRTAP19-5Q3LI72 72 aa-0.15□□□□□ -2.43
SCG2-203ENST00000433889 C12orf73Q69YU5 71 aa-0.15□□□□□ -2.43
SCG2-203ENST00000433889 KRTAP8-1Q8IUC2 63 aa-0.15□□□□□ -2.43
SCG2-203ENST00000433889 COPS9Q8WXC6 57 aa-0.15□□□□□ -2.43
SCG2-203ENST00000433889 PFDN5Q99471 154 aa-0.15□□□□□ -2.43
SCG2-203ENST00000433889 PDCD10Q9BUL8 212 aa-0.15□□□□□ -2.43
SCG2-203ENST00000433889 SPCS1Q9Y6A9 102 aa-0.15□□□□□ -2.43
SCG2-203ENST00000433889 CEP162Q5TB80 1403 aa-0.15□□□□□ -2.43
SCG2-203ENST00000433889 ANKRD50Q9ULJ7 1429 aa-0.15□□□□□ -2.43
SCG2-203ENST00000433889 ANKRD36A6QL64 1941 aa-0.16□□□□□ -2.43
SCG2-203ENST00000433889 FXYD6-FXYD2A0A087WZ82 144 aa-0.16□□□□□ -2.44
SCG2-203ENST00000433889 WFDC2Q14508 124 aa-0.16□□□□□ -2.44
SCG2-203ENST00000433889 C10orf128Q5T292 105 aa-0.16□□□□□ -2.44
SCG2-203ENST00000433889 SCAPERQ9BY12 1400 aa-0.16□□□□□ -2.44
SCG2-203ENST00000433889 UACAQ9BZF9 1416 aa-0.16□□□□□ -2.44
SCG2-203ENST00000433889 RRBP1Q9P2E9 1410 aaKnown RBP-0.16□□□□□ -2.44
SCG2-203ENST00000433889 CCDC141Q6ZP82 1450 aa-0.16□□□□□ -2.44
SCG2-203ENST00000433889 PRXQ9BXM0 1461 aa-0.16□□□□□ -2.44
SCG2-203ENST00000433889 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.16□□□□□ -2.44
SCG2-203ENST00000433889 USF3Q68DE3 2245 aa-0.17□□□□□ -2.44
SCG2-203ENST00000433889 PI4KAP42356 2102 aa-0.17□□□□□ -2.44
SCG2-203ENST00000433889 SPTA1P02549 2419 aa-0.17□□□□□ -2.44
SCG2-203ENST00000433889 TRAV13-2A0A0B4J235 113 aa-0.17□□□□□ -2.44
SCG2-203ENST00000433889 SIX6O95475 246 aa-0.17□□□□□ -2.44
SCG2-203ENST00000433889 SMR3BP02814 79 aaPredicted RBP-0.17□□□□□ -2.44
SCG2-203ENST00000433889 HIST1H1DP16402 221 aaKnown RBP-0.17□□□□□ -2.44
SCG2-203ENST00000433889 CCL18P55774 89 aa-0.17□□□□□ -2.44
SCG2-203ENST00000433889 RBM3P98179 157 aaKnown RBP-0.17□□□□□ -2.44
SCG2-203ENST00000433889 Q5VSD8 79 aa-0.17□□□□□ -2.44
SCG2-203ENST00000433889 DEFB123Q8N688 67 aa-0.17□□□□□ -2.44
SCG2-203ENST00000433889 HCG22E2RYF7 251 aa-0.18□□□□□ -2.44
SCG2-203ENST00000433889 M0R135 149 aa-0.18□□□□□ -2.44
SCG2-203ENST00000433889 Q8IZM0 81 aa-0.18□□□□□ -2.44
SCG2-203ENST00000433889 SMIM4Q8WVI0 70 aa-0.18□□□□□ -2.44
SCG2-203ENST00000433889 SDF2Q99470 211 aa-0.18□□□□□ -2.44
SCG2-203ENST00000433889 TCHHQ07283 1943 aa-0.19□□□□□ -2.44
SCG2-203ENST00000433889 NAIPQ13075 1403 aa-0.19□□□□□ -2.44
SCG2-203ENST00000433889 EDC4Q6P2E9 1401 aaKnown RBP-0.19□□□□□ -2.44
SCG2-203ENST00000433889 CNTLNQ9NXG0 1405 aa-0.19□□□□□ -2.44
SCG2-203ENST00000433889 FAM25AB3EWG3 89 aa-0.19□□□□□ -2.44
SCG2-203ENST00000433889 FAM25CB3EWG5 89 aa-0.19□□□□□ -2.44
SCG2-203ENST00000433889 FAM25GB3EWG6 89 aa-0.19□□□□□ -2.44
SCG2-203ENST00000433889 ARPC4P59998 168 aa-0.19□□□□□ -2.44
SCG2-203ENST00000433889 SPAG11BQ08648 103 aa-0.19□□□□□ -2.44
SCG2-203ENST00000433889 SPAG11AQ6PDA7 123 aa-0.19□□□□□ -2.44
SCG2-203ENST00000433889 TTC9CQ8N5M4 171 aa-0.19□□□□□ -2.44
SCG2-203ENST00000433889 V9GYH0 126 aa-0.19□□□□□ -2.44
SCG2-203ENST00000433889 SPTBN1Q01082 2364 aaKnown RBP-0.19□□□□□ -2.44
SCG2-203ENST00000433889 ACACAQ13085 2346 aa-0.2□□□□□ -2.44
SCG2-203ENST00000433889 LOC730098B7Z3J9 87 aa-0.2□□□□□ -2.44
SCG2-203ENST00000433889 SMIM5Q71RC9 77 aa-0.2□□□□□ -2.44
SCG2-203ENST00000433889 DPH3Q96FX2 82 aa-0.2□□□□□ -2.44
SCG2-203ENST00000433889 LINC01600Q96MT4 127 aa-0.2□□□□□ -2.44
SCG2-203ENST00000433889 SNRNP25Q9BV90 132 aaKnown RBP-0.2□□□□□ -2.44
SCG2-203ENST00000433889 LENEPQ9Y5L5 61 aa-0.2□□□□□ -2.44
SCG2-203ENST00000433889 CPSF1Q10570 1443 aaKnown RBP-0.21□□□□□ -2.44
SCG2-203ENST00000433889 LOC105371267A0A1B0GV96 52 aa-0.21□□□□□ -2.44
SCG2-203ENST00000433889 H0YAA0 97 aa-0.21□□□□□ -2.44
SCG2-203ENST00000433889 BCE1O60756 84 aa-0.21□□□□□ -2.44
SCG2-203ENST00000433889 DCDP81605 110 aaKnown RBP-0.21□□□□□ -2.44
SCG2-203ENST00000433889 TFF3Q07654 80 aa-0.21□□□□□ -2.44
SCG2-203ENST00000433889 LINC00846Q9NV44 126 aa-0.21□□□□□ -2.44
SCG2-203ENST00000433889 DNAJC13O75165 2243 aa-0.21□□□□□ -2.44
SCG2-203ENST00000433889 PRM1P04553 51 aa-0.22□□□□□ -2.44
SCG2-203ENST00000433889 SELENOWP63302 87 aa-0.22□□□□□ -2.44
SCG2-203ENST00000433889 BTG2P78543 158 aa-0.22□□□□□ -2.44
SCG2-203ENST00000433889 COX17Q14061 63 aa-0.22□□□□□ -2.44
SCG2-203ENST00000433889 TMEM170BQ5T4T1 132 aa-0.22□□□□□ -2.44
SCG2-203ENST00000433889 Q6AWC8 147 aa-0.22□□□□□ -2.44
SCG2-203ENST00000433889 RERGLQ9H628 205 aa-0.22□□□□□ -2.44
SCG2-203ENST00000433889 ANKARQ7Z5J8 1434 aa-0.22□□□□□ -2.45
SCG2-203ENST00000433889 URB1O60287 2271 aaKnown RBP-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms