RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 RAPGEF2Q9Y4G8 1499 aa-2.09□□□□□ -2.74
LINC01239-201ENST00000433645 UTP20O75691 2785 aaKnown RBP-2.1□□□□□ -2.74
LINC01239-201ENST00000433645 RGPD8O14715 1765 aaPredicted RBP-2.1□□□□□ -2.75
LINC01239-201ENST00000433645 RGPD5Q99666 1765 aa-2.1□□□□□ -2.75
LINC01239-201ENST00000433645 RNF213Q63HN8 5207 aa-2.1□□□□□ -2.75
LINC01239-201ENST00000433645 CRYBG1Q9Y4K1 1723 aa-2.1□□□□□ -2.75
LINC01239-201ENST00000433645 UQCRHP07919 91 aa-2.1□□□□□ -2.75
LINC01239-201ENST00000433645 TRGV9Q99603 122 aa-2.1□□□□□ -2.75
LINC01239-201ENST00000433645 WDR87Q6ZQQ6 2873 aa-2.1□□□□□ -2.75
LINC01239-201ENST00000433645 PKD1L2Q7Z442 2459 aa-2.11□□□□□ -2.75
LINC01239-201ENST00000433645 S100A1P23297 94 aa-2.11□□□□□ -2.75
LINC01239-201ENST00000433645 TEX15Q9BXT5 2789 aa-2.11□□□□□ -2.75
LINC01239-201ENST00000433645 PKD1L3Q7Z443 1732 aa-2.11□□□□□ -2.75
LINC01239-201ENST00000433645 UBR3Q6ZT12 1888 aa-2.11□□□□□ -2.75
LINC01239-201ENST00000433645 A0A1B0GV90 55 aa-2.12□□□□□ -2.75
LINC01239-201ENST00000433645 MRPS10P82664 201 aaKnown RBP-2.12□□□□□ -2.75
LINC01239-201ENST00000433645 HMGN3Q15651 99 aa-2.12□□□□□ -2.75
LINC01239-201ENST00000433645 ALKAL2Q6UX46 152 aa-2.12□□□□□ -2.75
LINC01239-201ENST00000433645 C4AP0C0L4 1744 aa-2.12□□□□□ -2.75
LINC01239-201ENST00000433645 C4BP0C0L5 1744 aa-2.12□□□□□ -2.75
LINC01239-201ENST00000433645 MAGI2Q86UL8 1455 aa-2.13□□□□□ -2.75
LINC01239-201ENST00000433645 GTF2H5Q6ZYL4 71 aa-2.13□□□□□ -2.75
LINC01239-201ENST00000433645 FAM135AQ9P2D6 1515 aa-2.13□□□□□ -2.75
LINC01239-201ENST00000433645 LAMA3Q16787 3333 aa-2.13□□□□□ -2.75
LINC01239-201ENST00000433645 TMEM203Q969S6 136 aa-2.14□□□□□ -2.75
LINC01239-201ENST00000433645 DNAH1Q9P2D7 4330 aa-2.14□□□□□ -2.75
LINC01239-201ENST00000433645 ANKRD50Q9ULJ7 1429 aa-2.15□□□□□ -2.75
LINC01239-201ENST00000433645 GNG8Q9UK08 70 aa-2.15□□□□□ -2.75
LINC01239-201ENST00000433645 IGLC2P0DOY2 106 aa-2.16□□□□□ -2.76
LINC01239-201ENST00000433645 IGLC3P0DOY3 106 aa-2.16□□□□□ -2.76
LINC01239-201ENST00000433645 DSPP15924 2871 aaKnown RBP-2.16□□□□□ -2.76
LINC01239-201ENST00000433645 NRXN1Q9ULB1 1477 aa-2.17□□□□□ -2.76
LINC01239-201ENST00000433645 GNGT2O14610 69 aa-2.17□□□□□ -2.76
LINC01239-201ENST00000433645 C2orf88Q9BSF0 95 aa-2.17□□□□□ -2.76
LINC01239-201ENST00000433645 NBEAL2Q6ZNJ1 2754 aa-2.17□□□□□ -2.76
LINC01239-201ENST00000433645 A0A0C4DFX4 3053 aa-2.18□□□□□ -2.76
LINC01239-201ENST00000433645 PLECQ15149 4684 aaKnown RBP-2.18□□□□□ -2.76
LINC01239-201ENST00000433645 CCDC168Q8NDH2 2452 aa-2.19□□□□□ -2.76
LINC01239-201ENST00000433645 ZFYVE16Q7Z3T8 1539 aa-2.19□□□□□ -2.76
LINC01239-201ENST00000433645 TIAM2Q8IVF5 1701 aa-2.2□□□□□ -2.76
LINC01239-201ENST00000433645 LRRC9Q6ZRR7 1453 aa-2.2□□□□□ -2.76
LINC01239-201ENST00000433645 RELNP78509 3460 aa-2.21□□□□□ -2.76
LINC01239-201ENST00000433645 TMEM218A2RU14 115 aa-2.21□□□□□ -2.76
LINC01239-201ENST00000433645 D6R8Y8 96 aa-2.21□□□□□ -2.76
LINC01239-201ENST00000433645 ATOX1O00244 68 aa-2.21□□□□□ -2.76
LINC01239-201ENST00000433645 NDUFA3O95167 84 aa-2.21□□□□□ -2.76
LINC01239-201ENST00000433645 COX7BP24311 80 aa-2.21□□□□□ -2.76
LINC01239-201ENST00000433645 MUSTN1Q8IVN3 82 aa-2.21□□□□□ -2.76
LINC01239-201ENST00000433645 SERP2Q8N6R1 65 aa-2.21□□□□□ -2.76
LINC01239-201ENST00000433645 ALKQ9UM73 1620 aa-2.21□□□□□ -2.76
LINC01239-201ENST00000433645 ETDBQ3ZM63 59 aa-2.22□□□□□ -2.76
LINC01239-201ENST00000433645 CEP290O15078 2479 aa-2.23□□□□□ -2.77
LINC01239-201ENST00000433645 MYH4Q9Y623 1939 aa-2.23□□□□□ -2.77
LINC01239-201ENST00000433645 RPL38P63173 70 aaKnown RBP-2.23□□□□□ -2.77
LINC01239-201ENST00000433645 ZNF720Q7Z2F6 126 aa-2.23□□□□□ -2.77
LINC01239-201ENST00000433645 TNRC6CQ9HCJ0 1690 aaKnown RBP-2.23□□□□□ -2.77
LINC01239-201ENST00000433645 ANKRD36BQ8N2N9 1353 aa-2.23□□□□□ -2.77
LINC01239-201ENST00000433645 CLTCQ00610 1675 aaKnown RBP-2.24□□□□□ -2.77
LINC01239-201ENST00000433645 LEPROTL1O95214 131 aa-2.24□□□□□ -2.77
LINC01239-201ENST00000433645 PMCHL2Q9BQD1 86 aa-2.24□□□□□ -2.77
LINC01239-201ENST00000433645 UBE2D4Q9Y2X8 147 aa-2.24□□□□□ -2.77
LINC01239-201ENST00000433645 SACSQ9NZJ4 4579 aa-2.25□□□□□ -2.77
LINC01239-201ENST00000433645 MAP3K1Q13233 1512 aa-2.25□□□□□ -2.77
LINC01239-201ENST00000433645 USP9XQ93008 2570 aaPredicted RBP-2.25□□□□□ -2.77
LINC01239-201ENST00000433645 EPRSP07814 1512 aaKnown RBP-2.27□□□□□ -2.77
LINC01239-201ENST00000433645 F8WEM9 126 aa-2.27□□□□□ -2.77
LINC01239-201ENST00000433645 MT1HP80294 61 aa-2.27□□□□□ -2.77
LINC01239-201ENST00000433645 ACACBO00763 2458 aa-2.27□□□□□ -2.77
LINC01239-201ENST00000433645 TRIOO75962 3097 aa-2.27□□□□□ -2.77
LINC01239-201ENST00000433645 PLXNC1O60486 1568 aa-2.27□□□□□ -2.77
LINC01239-201ENST00000433645 C20orf202A1L168 122 aa-2.28□□□□□ -2.77
LINC01239-201ENST00000433645 FYCO1Q9BQS8 1478 aa-2.29□□□□□ -2.78
LINC01239-201ENST00000433645 RGPD3A6NKT7 1758 aaPredicted RBP-2.29□□□□□ -2.78
LINC01239-201ENST00000433645 RGPD4Q7Z3J3 1758 aa-2.29□□□□□ -2.78
LINC01239-201ENST00000433645 DNHD1Q96M86 4753 aa-2.3□□□□□ -2.78
LINC01239-201ENST00000433645 RIF1Q5UIP0 2472 aaKnown RBP-2.3□□□□□ -2.78
LINC01239-201ENST00000433645 LRRC7Q96NW7 1537 aa-2.3□□□□□ -2.78
LINC01239-201ENST00000433645 MT-ATP8P03928 68 aa-2.3□□□□□ -2.78
LINC01239-201ENST00000433645 RGPD1P0DJD0 1748 aa-2.31□□□□□ -2.78
LINC01239-201ENST00000433645 FANCAO15360 1455 aa-2.31□□□□□ -2.78
LINC01239-201ENST00000433645 LINC00587B1AMM8 73 aa-2.31□□□□□ -2.78
LINC01239-201ENST00000433645 FRYQ5TBA9 3013 aa-2.31□□□□□ -2.78
LINC01239-201ENST00000433645 UQCRHLA0A096LP55 91 aa-2.32□□□□□ -2.78
LINC01239-201ENST00000433645 C3orf79P0CE67 100 aa-2.32□□□□□ -2.78
LINC01239-201ENST00000433645 SUPT6HQ7KZ85 1726 aaKnown RBP-2.32□□□□□ -2.78
LINC01239-201ENST00000433645 CMYA5Q8N3K9 4069 aa-2.32□□□□□ -2.78
LINC01239-201ENST00000433645 DEFA5Q01523 94 aa-2.33□□□□□ -2.78
LINC01239-201ENST00000433645 RANBP2P49792 3224 aaKnown RBP-2.33□□□□□ -2.78
LINC01239-201ENST00000433645 TEX14Q8IWB6 1497 aa-2.33□□□□□ -2.78
LINC01239-201ENST00000433645 SCN11AQ9UI33 1791 aa-2.33□□□□□ -2.78
LINC01239-201ENST00000433645 WIZO95785 1651 aa-2.34□□□□□ -2.78
LINC01239-201ENST00000433645 DNAH8Q96JB1 4490 aa-2.34□□□□□ -2.78
LINC01239-201ENST00000433645 USP32Q8NFA0 1604 aa-2.35□□□□□ -2.79
LINC01239-201ENST00000433645 ATP7BP35670 1465 aa-2.36□□□□□ -2.79
LINC01239-201ENST00000433645 A0A1B0GUT8 65 aa-2.36□□□□□ -2.79
LINC01239-201ENST00000433645 LINC00032P0C843 101 aa-2.36□□□□□ -2.79
LINC01239-201ENST00000433645 PRLHP81277 87 aa-2.36□□□□□ -2.79
LINC01239-201ENST00000433645 COL5A1-AS1Q5SY13 56 aa-2.36□□□□□ -2.79
LINC01239-201ENST00000433645 GAFA1Q96PS6 74 aa-2.36□□□□□ -2.79
LINC01239-201ENST00000433645 PRO3102Q9H379 93 aa-2.36□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms