RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 hDV103S1A0JD37 113 aa7.6□□□□□ -1.19
HMGCS1-202ENST00000433297 Q8N377 158 aa7.6□□□□□ -1.19
HMGCS1-202ENST00000433297 NKAPP1Q8N9T2 125 aa7.6□□□□□ -1.19
HMGCS1-202ENST00000433297 RPL37AP8A6NKH3 93 aa7.6□□□□□ -1.19
HMGCS1-202ENST00000433297 UNC79Q9P2D8 2635 aa7.6□□□□□ -1.19
HMGCS1-202ENST00000433297 Q6ZRP5 223 aa7.59□□□□□ -1.19
HMGCS1-202ENST00000433297 WFDC10BQ8IUB3 73 aa7.59□□□□□ -1.19
HMGCS1-202ENST00000433297 F8P00451 2351 aa7.59□□□□□ -1.19
HMGCS1-202ENST00000433297 DEFB116Q30KQ4 102 aa7.58□□□□□ -1.2
HMGCS1-202ENST00000433297 VWFP04275 2813 aa7.58□□□□□ -1.2
HMGCS1-202ENST00000433297 EGFEM1PQ0D2K5 195 aa7.58□□□□□ -1.2
HMGCS1-202ENST00000433297 SPART-AS1P0CW21 52 aa7.58□□□□□ -1.2
HMGCS1-202ENST00000433297 C1orf137Q5JT78 98 aa7.57□□□□□ -1.2
HMGCS1-202ENST00000433297 A0A1W2PNM2 257 aa7.57□□□□□ -1.2
HMGCS1-202ENST00000433297 K7EQZ3 153 aa7.56□□□□□ -1.2
HMGCS1-202ENST00000433297 ST20-AS1Q8NBB2 130 aa7.56□□□□□ -1.2
HMGCS1-202ENST00000433297 PMAIP1Q13794 54 aa7.55□□□□□ -1.2
HMGCS1-202ENST00000433297 KRTAP1-3Q8IUG1 177 aa7.55□□□□□ -1.2
HMGCS1-202ENST00000433297 IGKV2D-24A0A075B6R9 120 aa7.55□□□□□ -1.2
HMGCS1-202ENST00000433297 A0A0G2JQZ4 141 aa7.55□□□□□ -1.2
HMGCS1-202ENST00000433297 ETDCA0A1B0GVM5 59 aa7.55□□□□□ -1.2
HMGCS1-202ENST00000433297 A0A1W2PNN7 141 aa7.55□□□□□ -1.2
HMGCS1-202ENST00000433297 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.55□□□□□ -1.2
HMGCS1-202ENST00000433297 SERTAD4-AS1Q5TG53 156 aa7.54□□□□□ -1.2
HMGCS1-202ENST00000433297 TRAV22A0A0B4J277 110 aa7.54□□□□□ -1.2
HMGCS1-202ENST00000433297 C7orf33Q8WU49 177 aa7.54□□□□□ -1.2
HMGCS1-202ENST00000433297 APOC4P55056 127 aa7.54□□□□□ -1.2
HMGCS1-202ENST00000433297 WFDC13Q8IUB5 93 aa7.53□□□□□ -1.2
HMGCS1-202ENST00000433297 KRTAP10-3P60369 221 aa7.53□□□□□ -1.2
HMGCS1-202ENST00000433297 C15orf56Q8N910 161 aa7.53□□□□□ -1.2
HMGCS1-202ENST00000433297 Q8NAQ8 132 aa7.53□□□□□ -1.2
HMGCS1-202ENST00000433297 IGLV5-48A0A075B6I7 105 aa7.52□□□□□ -1.21
HMGCS1-202ENST00000433297 A8MUN3 132 aa7.52□□□□□ -1.21
HMGCS1-202ENST00000433297 DSCR10P59022 87 aa7.52□□□□□ -1.21
HMGCS1-202ENST00000433297 SYCNQ0VAF6 134 aa7.51□□□□□ -1.21
HMGCS1-202ENST00000433297 Q1T7F1 81 aa7.51□□□□□ -1.21
HMGCS1-202ENST00000433297 PRR15Q8IV56 129 aa7.51□□□□□ -1.21
HMGCS1-202ENST00000433297 A8MU10 97 aa7.5□□□□□ -1.21
HMGCS1-202ENST00000433297 FAM168BA1KXE4 195 aa7.5□□□□□ -1.21
HMGCS1-202ENST00000433297 UBE2BP63146 152 aa7.5□□□□□ -1.21
HMGCS1-202ENST00000433297 Q8NBF4 154 aa7.5□□□□□ -1.21
HMGCS1-202ENST00000433297 KCNQ1DNQ9H478 68 aa7.5□□□□□ -1.21
HMGCS1-202ENST00000433297 Q9BRP9 147 aa7.49□□□□□ -1.21
HMGCS1-202ENST00000433297 HCG22E2RYF7 251 aa7.48□□□□□ -1.21
HMGCS1-202ENST00000433297 LINC00208Q96KT6 92 aa7.48□□□□□ -1.21
HMGCS1-202ENST00000433297 Q6ZRX8 168 aa7.48□□□□□ -1.21
HMGCS1-202ENST00000433297 DHRS4-AS1Q9P1J3 65 aa7.48□□□□□ -1.21
HMGCS1-202ENST00000433297 PKD1L1Q8TDX9 2849 aa7.47□□□□□ -1.21
HMGCS1-202ENST00000433297 ZCCHC13Q8WW36 166 aaKnown RBP7.47□□□□□ -1.21
HMGCS1-202ENST00000433297 PSCAO43653 123 aa7.47□□□□□ -1.21
HMGCS1-202ENST00000433297 KRTAP26-1Q6PEX3 210 aa7.46□□□□□ -1.21
HMGCS1-202ENST00000433297 SMR3AQ99954 134 aa7.46□□□□□ -1.21
HMGCS1-202ENST00000433297 MP68P56378 58 aa7.46□□□□□ -1.22
HMGCS1-202ENST00000433297 HIVEP1P15822 2718 aa7.45□□□□□ -1.22
HMGCS1-202ENST00000433297 LCE6AA0A183 80 aa7.45□□□□□ -1.22
HMGCS1-202ENST00000433297 RPL37AP61513 92 aaKnown RBP7.45□□□□□ -1.22
HMGCS1-202ENST00000433297 NOTCH2Q04721 2471 aa7.45□□□□□ -1.22
HMGCS1-202ENST00000433297 CHKB-CPT1BH3BT56 60 aa7.44□□□□□ -1.22
HMGCS1-202ENST00000433297 SPTSSBQ8NFR3 76 aa7.44□□□□□ -1.22
HMGCS1-202ENST00000433297 RETNQ9HD89 108 aa7.44□□□□□ -1.22
HMGCS1-202ENST00000433297 USP24Q9UPU5 2620 aa7.43□□□□□ -1.22
HMGCS1-202ENST00000433297 B9D2Q9BPU9 175 aa7.43□□□□□ -1.22
HMGCS1-202ENST00000433297 TEP1Q99973 2627 aaKnown RBP7.42□□□□□ -1.22
HMGCS1-202ENST00000433297 BAHCC1Q9P281 2608 aa7.42□□□□□ -1.22
HMGCS1-202ENST00000433297 A0A087WSZ3 146 aa7.42□□□□□ -1.22
HMGCS1-202ENST00000433297 NDUFB1O75438 58 aa7.42□□□□□ -1.22
HMGCS1-202ENST00000433297 TNP2Q05952 138 aa7.42□□□□□ -1.22
HMGCS1-202ENST00000433297 KRTAP1-1Q07627 177 aa7.42□□□□□ -1.22
HMGCS1-202ENST00000433297 LINC00476Q8WZB0 136 aa7.42□□□□□ -1.22
HMGCS1-202ENST00000433297 SPRR4Q96PI1 79 aa7.42□□□□□ -1.22
HMGCS1-202ENST00000433297 UBR5O95071 2799 aaPredicted RBP7.41□□□□□ -1.22
HMGCS1-202ENST00000433297 CYP4F30PQ9H0H9 118 aa7.41□□□□□ -1.22
HMGCS1-202ENST00000433297 IGLV1-50A0A075B6I6 118 aa7.41□□□□□ -1.22
HMGCS1-202ENST00000433297 A0A1B0GW54 56 aa7.41□□□□□ -1.22
HMGCS1-202ENST00000433297 PRR15LQ9BU68 103 aa7.4□□□□□ -1.22
HMGCS1-202ENST00000433297 ATRQ13535 2644 aa7.4□□□□□ -1.22
HMGCS1-202ENST00000433297 ITPR2Q14571 2701 aa7.4□□□□□ -1.22
HMGCS1-202ENST00000433297 PDZD2O15018 2839 aa7.39□□□□□ -1.23
HMGCS1-202ENST00000433297 Q5VV11 94 aa7.39□□□□□ -1.23
HMGCS1-202ENST00000433297 TENM1Q9UKZ4 2725 aa7.39□□□□□ -1.23
HMGCS1-202ENST00000433297 KRTAP4-16G5E9R7 235 aaPredicted RBP7.37□□□□□ -1.23
HMGCS1-202ENST00000433297 H0Y9P7 68 aa7.37□□□□□ -1.23
HMGCS1-202ENST00000433297 IGFL1Q6UW32 110 aa7.37□□□□□ -1.23
HMGCS1-202ENST00000433297 MRPL55Q7Z7F7 128 aaKnown RBP7.37□□□□□ -1.23
HMGCS1-202ENST00000433297 TRRAPQ9Y4A5 3859 aa7.37□□□□□ -1.23
HMGCS1-202ENST00000433297 PRLHP81277 87 aa7.36□□□□□ -1.23
HMGCS1-202ENST00000433297 CASC10Q5T4H9 136 aa7.36□□□□□ -1.23
HMGCS1-202ENST00000433297 ANK3Q12955 4377 aaKnown RBP7.35□□□□□ -1.23
HMGCS1-202ENST00000433297 A0A096LNI7 61 aa7.35□□□□□ -1.23
HMGCS1-202ENST00000433297 CASC2Q6XLA1 102 aa7.35□□□□□ -1.23
HMGCS1-202ENST00000433297 A6NED7 52 aa7.34□□□□□ -1.23
HMGCS1-202ENST00000433297 KRTAP7-1Q8IUC3 87 aa7.34□□□□□ -1.23
HMGCS1-202ENST00000433297 Q8N9P0 234 aaPredicted RBP7.34□□□□□ -1.23
HMGCS1-202ENST00000433297 UBE2AP49459 152 aa7.34□□□□□ -1.23
HMGCS1-202ENST00000433297 REG3GQ6UW15 175 aa7.34□□□□□ -1.23
HMGCS1-202ENST00000433297 SPRR1AP35321 89 aa7.33□□□□□ -1.24
HMGCS1-202ENST00000433297 C16orf90A8MZG2 172 aa7.33□□□□□ -1.24
HMGCS1-202ENST00000433297 FASNP49327 2511 aaKnown RBP7.33□□□□□ -1.24
HMGCS1-202ENST00000433297 DEFB131BA0A096LNP1 70 aa7.32□□□□□ -1.24
HMGCS1-202ENST00000433297 IGKV2-24A0A0C4DH68 120 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms