RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 UBE2AP49459 152 aa3.48□□□□□ -1.85
HMGB3P24-201ENST00000433260 KRTAP10-8P60410 259 aa3.48□□□□□ -1.85
HMGB3P24-201ENST00000433260 ADAMTSL4-AS1Q5T5F5 129 aa3.48□□□□□ -1.85
HMGB3P24-201ENST00000433260 PRR26Q8N8Z3 221 aa3.48□□□□□ -1.85
HMGB3P24-201ENST00000433260 C20orf202A1L168 122 aa3.47□□□□□ -1.85
HMGB3P24-201ENST00000433260 M0R378 163 aa3.47□□□□□ -1.85
HMGB3P24-201ENST00000433260 RPL28P46779 137 aaKnown RBP3.47□□□□□ -1.85
HMGB3P24-201ENST00000433260 PRLHP81277 87 aa3.47□□□□□ -1.85
HMGB3P24-201ENST00000433260 HIST3H2BBQ8N257 126 aa3.47□□□□□ -1.85
HMGB3P24-201ENST00000433260 TMEM126AQ9H061 195 aa3.47□□□□□ -1.85
HMGB3P24-201ENST00000433260 VPS13BQ7Z7G8 4022 aa3.47□□□□□ -1.85
HMGB3P24-201ENST00000433260 ZNF815PA8K554 130 aa3.46□□□□□ -1.86
HMGB3P24-201ENST00000433260 GAGE2AQ6NT46 116 aa3.46□□□□□ -1.86
HMGB3P24-201ENST00000433260 HIST1H2BLQ99880 126 aa3.46□□□□□ -1.86
HMGB3P24-201ENST00000433260 MIEN1Q9BRT3 115 aa3.46□□□□□ -1.86
HMGB3P24-201ENST00000433260 ANAPC11Q9NYG5 84 aa3.46□□□□□ -1.86
HMGB3P24-201ENST00000433260 TRBV10-3A0A0K0K1G6 114 aa3.45□□□□□ -1.86
HMGB3P24-201ENST00000433260 KRTAP1-4P0C5Y4 121 aa3.45□□□□□ -1.86
HMGB3P24-201ENST00000433260 S100A7L2Q5SY68 101 aa3.45□□□□□ -1.86
HMGB3P24-201ENST00000433260 SOSTDC1Q6X4U4 206 aa3.45□□□□□ -1.86
HMGB3P24-201ENST00000433260 LOC107984156A0A0G2JMH3 177 aa3.44□□□□□ -1.86
HMGB3P24-201ENST00000433260 DDTP30046 118 aa3.44□□□□□ -1.86
HMGB3P24-201ENST00000433260 SCGB1D4Q6XE38 83 aa3.44□□□□□ -1.86
HMGB3P24-201ENST00000433260 PCP2Q8IVA1 136 aa3.44□□□□□ -1.86
HMGB3P24-201ENST00000433260 ARL17AQ8IVW1 177 aa3.44□□□□□ -1.86
HMGB3P24-201ENST00000433260 OR13C6PQ8NH95 151 aa3.44□□□□□ -1.86
HMGB3P24-201ENST00000433260 LINC00308Q8TCZ7 52 aa3.44□□□□□ -1.86
HMGB3P24-201ENST00000433260 HIGD2AQ9BW72 106 aa3.44□□□□□ -1.86
HMGB3P24-201ENST00000433260 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
HMGB3P24-201ENST00000433260 ETDCA0A1B0GVM5 59 aa3.43□□□□□ -1.86
HMGB3P24-201ENST00000433260 KRTAP13-1Q8IUC0 172 aa3.43□□□□□ -1.86
HMGB3P24-201ENST00000433260 MPLKIPQ8TAP9 179 aa3.43□□□□□ -1.86
HMGB3P24-201ENST00000433260 SMCR5Q8TEV8 140 aa3.43□□□□□ -1.86
HMGB3P24-201ENST00000433260 LITAFQ99732 161 aa3.43□□□□□ -1.86
HMGB3P24-201ENST00000433260 KCNQ1DNQ9H478 68 aa3.43□□□□□ -1.86
HMGB3P24-201ENST00000433260 A0A087X002 238 aa3.42□□□□□ -1.86
HMGB3P24-201ENST00000433260 TRBV10-2A0A0K0K1G8 114 aa3.42□□□□□ -1.86
HMGB3P24-201ENST00000433260 TIMM17BO60830 172 aa3.42□□□□□ -1.86
HMGB3P24-201ENST00000433260 NDUFC2O95298 119 aa3.42□□□□□ -1.86
HMGB3P24-201ENST00000433260 TSPAN13O95857 204 aa3.42□□□□□ -1.86
HMGB3P24-201ENST00000433260 CRYGAP11844 174 aa3.42□□□□□ -1.86
HMGB3P24-201ENST00000433260 RPL13AP40429 203 aaKnown RBP3.42□□□□□ -1.86
HMGB3P24-201ENST00000433260 AKR1D1P51857 326 aa3.42□□□□□ -1.86
HMGB3P24-201ENST00000433260 MUSTN1Q8IVN3 82 aa3.42□□□□□ -1.86
HMGB3P24-201ENST00000433260 MTURNQ8N3F0 131 aa3.42□□□□□ -1.86
HMGB3P24-201ENST00000433260 SPANXB1Q9NS25 103 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P24-201ENST00000433260 A0A1B0GV72 72 aa3.41□□□□□ -1.86
HMGB3P24-201ENST00000433260 SPRR1AP35321 89 aa3.41□□□□□ -1.86
HMGB3P24-201ENST00000433260 LINC00337Q8N6G1 96 aa3.41□□□□□ -1.86
HMGB3P24-201ENST00000433260 TYMSOSQ8TAI1 123 aa3.41□□□□□ -1.86
HMGB3P24-201ENST00000433260 PPDPFQ9H3Y8 114 aa3.41□□□□□ -1.86
HMGB3P24-201ENST00000433260 SPANXCQ9NY87 97 aa3.41□□□□□ -1.86
HMGB3P24-201ENST00000433260 LRP1Q07954 4544 aaKnown RBP3.41□□□□□ -1.86
HMGB3P24-201ENST00000433260 MYCBP2O75592 4640 aa3.4□□□□□ -1.86
HMGB3P24-201ENST00000433260 PKHD1L1Q86WI1 4243 aa3.4□□□□□ -1.86
HMGB3P24-201ENST00000433260 TRAV23DV6A0A075B6W5 121 aa3.4□□□□□ -1.87
HMGB3P24-201ENST00000433260 A6NDN8 102 aa3.4□□□□□ -1.87
HMGB3P24-201ENST00000433260 KRTAP4-16G5E9R7 235 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P24-201ENST00000433260 IGLV6-57P01721 117 aa3.4□□□□□ -1.87
HMGB3P24-201ENST00000433260 KRTAP13-2Q52LG2 175 aa3.4□□□□□ -1.87
HMGB3P24-201ENST00000433260 V9GYY9 64 aa3.4□□□□□ -1.87
HMGB3P24-201ENST00000433260 ZNF73O43830 326 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P24-201ENST00000433260 ERC2-IT1O76042 136 aa3.39□□□□□ -1.87
HMGB3P24-201ENST00000433260 HINT1P49773 126 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P24-201ENST00000433260 UBE2V1Q13404 147 aa3.39□□□□□ -1.87
HMGB3P24-201ENST00000433260 LINC00518Q8N0U6 118 aa3.39□□□□□ -1.87
HMGB3P24-201ENST00000433260 C3orf22Q8N5N4 141 aa3.39□□□□□ -1.87
HMGB3P24-201ENST00000433260 SPRR4Q96PI1 79 aa3.39□□□□□ -1.87
HMGB3P24-201ENST00000433260 SPANXDQ9BXN6 97 aa3.39□□□□□ -1.87
HMGB3P24-201ENST00000433260 DMBT1Q9UGM3 2413 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P24-201ENST00000433260 FAT3Q8TDW7 4589 aa3.38□□□□□ -1.87
HMGB3P24-201ENST00000433260 IFITM1P13164 125 aa3.38□□□□□ -1.87
HMGB3P24-201ENST00000433260 FAM229BQ4G0N7 80 aa3.38□□□□□ -1.87
HMGB3P24-201ENST00000433260 Q6ZRX8 168 aa3.38□□□□□ -1.87
HMGB3P24-201ENST00000433260 C14orf144Q96I85 54 aa3.38□□□□□ -1.87
HMGB3P24-201ENST00000433260 Q9BRP9 147 aa3.38□□□□□ -1.87
HMGB3P24-201ENST00000433260 IGLV9-49A0A0B4J1Y8 123 aa3.37□□□□□ -1.87
HMGB3P24-201ENST00000433260 JOSD1Q15040 202 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P24-201ENST00000433260 PRR4Q16378 134 aa3.37□□□□□ -1.87
HMGB3P24-201ENST00000433260 SPATA45Q537H7 98 aa3.37□□□□□ -1.87
HMGB3P24-201ENST00000433260 Q6ZVH6 145 aa3.37□□□□□ -1.87
HMGB3P24-201ENST00000433260 ST20-AS1Q8NBB2 130 aa3.37□□□□□ -1.87
HMGB3P24-201ENST00000433260 COPS9Q8WXC6 57 aa3.37□□□□□ -1.87
HMGB3P24-201ENST00000433260 PAM16Q9Y3D7 125 aa3.37□□□□□ -1.87
HMGB3P24-201ENST00000433260 ZNF706Q9Y5V0 76 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P24-201ENST00000433260 COX8AP10176 69 aa3.36□□□□□ -1.87
HMGB3P24-201ENST00000433260 COX7BP24311 80 aa3.36□□□□□ -1.87
HMGB3P24-201ENST00000433260 C6orf99Q4VX62 202 aa3.36□□□□□ -1.87
HMGB3P24-201ENST00000433260 LINC00304Q8N9R0 145 aa3.36□□□□□ -1.87
HMGB3P24-201ENST00000433260 DEFB105AQ8NG35 78 aa3.36□□□□□ -1.87
HMGB3P24-201ENST00000433260 HIST1H4GQ99525 98 aa3.36□□□□□ -1.87
HMGB3P24-201ENST00000433260 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
HMGB3P24-201ENST00000433260 C12orf57Q99622 126 aa3.35□□□□□ -1.87
HMGB3P24-201ENST00000433260 RETNLBQ9BQ08 111 aa3.35□□□□□ -1.87
HMGB3P24-201ENST00000433260 VAMP8Q9BV40 100 aa3.35□□□□□ -1.87
HMGB3P24-201ENST00000433260 A0A0A0MQY5 61 aa3.34□□□□□ -1.87
HMGB3P24-201ENST00000433260 TRAV13-2A0A0B4J235 113 aa3.34□□□□□ -1.87
HMGB3P24-201ENST00000433260 TSTD3H0UI37 97 aa3.34□□□□□ -1.87
HMGB3P24-201ENST00000433260 SCGB1A1P11684 91 aa3.34□□□□□ -1.87
HMGB3P24-201ENST00000433260 TAL2Q16559 108 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms