RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 IGLV6-57P01721 117 aa5.03□□□□□ -1.6
LINC01108-201ENST00000427276 CXCL6P80162 114 aa5.03□□□□□ -1.6
LINC01108-201ENST00000427276 FUSP35637 526 aaKnown RBP eCLIP5.02□□□□□ -1.61
LINC01108-201ENST00000427276 MRPL55Q7Z7F7 128 aaKnown RBP5.02□□□□□ -1.61
LINC01108-201ENST00000427276 HIVEP1P15822 2718 aa5.02□□□□□ -1.61
LINC01108-201ENST00000427276 FAM229BQ4G0N7 80 aa5.02□□□□□ -1.61
LINC01108-201ENST00000427276 SMR3AQ99954 134 aa5.02□□□□□ -1.61
LINC01108-201ENST00000427276 IGKV2D-24A0A075B6R9 120 aa5.01□□□□□ -1.61
LINC01108-201ENST00000427276 APOC4P55056 127 aa5.01□□□□□ -1.61
LINC01108-201ENST00000427276 OTOGQ6ZRI0 2925 aa5.01□□□□□ -1.61
LINC01108-201ENST00000427276 RPL37AP8A6NKH3 93 aa5□□□□□ -1.61
LINC01108-201ENST00000427276 LYRM9A8MSI8 78 aa5□□□□□ -1.61
LINC01108-201ENST00000427276 PRYO14603 147 aa5□□□□□ -1.61
LINC01108-201ENST00000427276 Q6ZRU5 148 aa5□□□□□ -1.61
LINC01108-201ENST00000427276 NKAPP1Q8N9T2 125 aa5□□□□□ -1.61
LINC01108-201ENST00000427276 TRBV7-4A0A0J9YYF1 115 aa5□□□□□ -1.61
LINC01108-201ENST00000427276 NDUFC1O43677 76 aa5□□□□□ -1.61
LINC01108-201ENST00000427276 SPART-AS1P0CW21 52 aa5□□□□□ -1.61
LINC01108-201ENST00000427276 LELP1Q5T871 98 aa5□□□□□ -1.61
LINC01108-201ENST00000427276 WFDC10BQ8IUB3 73 aa5□□□□□ -1.61
LINC01108-201ENST00000427276 PDZD2O15018 2839 aa5□□□□□ -1.61
LINC01108-201ENST00000427276 A0A0J9YWU9 116 aa4.99□□□□□ -1.61
LINC01108-201ENST00000427276 IGHV4-30-4P0DP06 118 aa4.99□□□□□ -1.61
LINC01108-201ENST00000427276 ELOF1P60002 83 aaKnown RBP4.99□□□□□ -1.61
LINC01108-201ENST00000427276 C9orf66Q5T8R8 295 aa4.99□□□□□ -1.61
LINC01108-201ENST00000427276 SMIM29Q86T20 159 aa4.99□□□□□ -1.61
LINC01108-201ENST00000427276 PKD1L1Q8TDX9 2849 aa4.99□□□□□ -1.61
LINC01108-201ENST00000427276 M0R378 163 aa4.98□□□□□ -1.61
LINC01108-201ENST00000427276 BCE1O60756 84 aa4.98□□□□□ -1.61
LINC01108-201ENST00000427276 IGKV4-1P06312 121 aa4.98□□□□□ -1.61
LINC01108-201ENST00000427276 DEFB116Q30KQ4 102 aa4.98□□□□□ -1.61
LINC01108-201ENST00000427276 LINC00612Q8N6U2 182 aa4.97□□□□□ -1.61
LINC01108-201ENST00000427276 KRTAP1-3Q8IUG1 177 aa4.97□□□□□ -1.61
LINC01108-201ENST00000427276 TENM1Q9UKZ4 2725 aa4.97□□□□□ -1.61
LINC01108-201ENST00000427276 H3BQ85 93 aa4.96□□□□□ -1.61
LINC01108-201ENST00000427276 PSPHP1O15172 72 aa4.96□□□□□ -1.61
LINC01108-201ENST00000427276 ESRGQ1W209 222 aa4.96□□□□□ -1.61
LINC01108-201ENST00000427276 C16orf95Q9H693 158 aa4.96□□□□□ -1.61
LINC01108-201ENST00000427276 KRTAP10-3P60369 221 aa4.96□□□□□ -1.62
LINC01108-201ENST00000427276 A0A0G2JQZ4 141 aa4.96□□□□□ -1.62
LINC01108-201ENST00000427276 A0A1W2PNN7 141 aa4.96□□□□□ -1.62
LINC01108-201ENST00000427276 Q6ZRP5 223 aa4.95□□□□□ -1.62
LINC01108-201ENST00000427276 TRRAPQ9Y4A5 3859 aa4.95□□□□□ -1.62
LINC01108-201ENST00000427276 ATP5EP56381 51 aaPredicted RBP4.95□□□□□ -1.62
LINC01108-201ENST00000427276 UBE2BP63146 152 aa4.95□□□□□ -1.62
LINC01108-201ENST00000427276 KRTAP21-3Q3LHN1 58 aa4.95□□□□□ -1.62
LINC01108-201ENST00000427276 ETDCA0A1B0GVM5 59 aa4.94□□□□□ -1.62
LINC01108-201ENST00000427276 KPRPQ5T749 579 aaPredicted RBP4.94□□□□□ -1.62
LINC01108-201ENST00000427276 ST20-AS1Q8NBB2 130 aa4.94□□□□□ -1.62
LINC01108-201ENST00000427276 MDFIQ99750 246 aa4.94□□□□□ -1.62
LINC01108-201ENST00000427276 EPM2AB3EWF7 344 aa4.94□□□□□ -1.62
LINC01108-201ENST00000427276 ANK3Q12955 4377 aaKnown RBP4.94□□□□□ -1.62
LINC01108-201ENST00000427276 EGFEM1PQ0D2K5 195 aa4.94□□□□□ -1.62
LINC01108-201ENST00000427276 WFDC13Q8IUB5 93 aa4.94□□□□□ -1.62
LINC01108-201ENST00000427276 SYCNQ0VAF6 134 aa4.93□□□□□ -1.62
LINC01108-201ENST00000427276 C1orf137Q5JT78 98 aa4.93□□□□□ -1.62
LINC01108-201ENST00000427276 OCR1Q9BZK8 76 aa4.93□□□□□ -1.62
LINC01108-201ENST00000427276 PRR34Q9NV39 138 aa4.93□□□□□ -1.62
LINC01108-201ENST00000427276 Q8N377 158 aa4.93□□□□□ -1.62
LINC01108-201ENST00000427276 Q8NAQ8 132 aa4.93□□□□□ -1.62
LINC01108-201ENST00000427276 C7orf33Q8WU49 177 aa4.92□□□□□ -1.62
LINC01108-201ENST00000427276 FAM168BA1KXE4 195 aa4.92□□□□□ -1.62
LINC01108-201ENST00000427276 Q6ZTC4 211 aa4.92□□□□□ -1.62
LINC01108-201ENST00000427276 GVQW2A0A096LPI5 108 aaPredicted RBP4.91□□□□□ -1.62
LINC01108-201ENST00000427276 RBM12B-AS1Q9P1G2 102 aa4.91□□□□□ -1.62
LINC01108-201ENST00000427276 NOTCH1P46531 2555 aa4.91□□□□□ -1.62
LINC01108-201ENST00000427276 K7EQZ3 153 aa4.9□□□□□ -1.62
LINC01108-201ENST00000427276 C15orf56Q8N910 161 aa4.9□□□□□ -1.62
LINC01108-201ENST00000427276 A0A1W2PNM2 257 aa4.9□□□□□ -1.63
LINC01108-201ENST00000427276 C1orf64Q8NEQ6 169 aa4.9□□□□□ -1.63
LINC01108-201ENST00000427276 A0A096LNI7 61 aa4.89□□□□□ -1.63
LINC01108-201ENST00000427276 KRTAP1-1Q07627 177 aa4.88□□□□□ -1.63
LINC01108-201ENST00000427276 C8orf87E5RJ46 101 aa4.88□□□□□ -1.63
LINC01108-201ENST00000427276 IGKV2-24A0A0C4DH68 120 aa4.88□□□□□ -1.63
LINC01108-201ENST00000427276 ERC2-IT1O76042 136 aa4.88□□□□□ -1.63
LINC01108-201ENST00000427276 INAFM1C9JVW0 142 aa4.87□□□□□ -1.63
LINC01108-201ENST00000427276 RPL37AP61513 92 aaKnown RBP4.87□□□□□ -1.63
LINC01108-201ENST00000427276 LINC00208Q96KT6 92 aa4.87□□□□□ -1.63
LINC01108-201ENST00000427276 COL6A5A8TX70 2615 aa4.87□□□□□ -1.63
LINC01108-201ENST00000427276 TENM3Q9P273 2699 aa4.87□□□□□ -1.63
LINC01108-201ENST00000427276 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.86□□□□□ -1.63
LINC01108-201ENST00000427276 Q9BRP9 147 aa4.86□□□□□ -1.63
LINC01108-201ENST00000427276 DHRS4-AS1Q9P1J3 65 aa4.86□□□□□ -1.63
LINC01108-201ENST00000427276 A0A087WSZ3 146 aa4.86□□□□□ -1.63
LINC01108-201ENST00000427276 DEFB131BA0A096LNP1 70 aa4.86□□□□□ -1.63
LINC01108-201ENST00000427276 PSCAO43653 123 aa4.86□□□□□ -1.63
LINC01108-201ENST00000427276 Q6ZRX8 168 aa4.86□□□□□ -1.63
LINC01108-201ENST00000427276 Q8NBF4 154 aa4.86□□□□□ -1.63
LINC01108-201ENST00000427276 hDV103S1A0JD37 113 aa4.85□□□□□ -1.63
LINC01108-201ENST00000427276 MP68P56378 58 aa4.85□□□□□ -1.63
LINC01108-201ENST00000427276 NBEAL1Q6ZS30 2694 aa4.85□□□□□ -1.63
LINC01108-201ENST00000427276 A8MUN3 132 aa4.85□□□□□ -1.63
LINC01108-201ENST00000427276 PRLHP81277 87 aa4.85□□□□□ -1.63
LINC01108-201ENST00000427276 CASC10Q5T4H9 136 aa4.85□□□□□ -1.63
LINC01108-201ENST00000427276 KCNQ1DNQ9H478 68 aa4.85□□□□□ -1.63
LINC01108-201ENST00000427276 HCG22E2RYF7 251 aa4.84□□□□□ -1.63
LINC01108-201ENST00000427276 DSCR10P59022 87 aa4.84□□□□□ -1.63
LINC01108-201ENST00000427276 SPTSSBQ8NFR3 76 aa4.84□□□□□ -1.63
LINC01108-201ENST00000427276 STAB1Q9NY15 2570 aa4.84□□□□□ -1.63
LINC01108-201ENST00000427276 IGLV5-48A0A075B6I7 105 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms