RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 ERG28Q9UKR5 140 aa8.3□□□□□ -1.08
SNX3-204ENST00000426155 FXYD2P54710 66 aa8.29□□□□□ -1.08
SNX3-204ENST00000426155 REG3GQ6UW15 175 aa8.29□□□□□ -1.08
SNX3-204ENST00000426155 MYMXA0A1B0GTQ4 84 aa8.28□□□□□ -1.08
SNX3-204ENST00000426155 HERVK_113P61574 105 aa8.28□□□□□ -1.08
SNX3-204ENST00000426155 MRPL55Q7Z7F7 128 aaKnown RBP8.28□□□□□ -1.08
SNX3-204ENST00000426155 IGKV2D-26A0A0A0MRZ7 120 aa8.27□□□□□ -1.09
SNX3-204ENST00000426155 MTURNQ8N3F0 131 aa8.27□□□□□ -1.09
SNX3-204ENST00000426155 NAA38Q9BRA0 125 aaKnown RBP8.27□□□□□ -1.09
SNX3-204ENST00000426155 A0A0U1RRA0 63 aa8.26□□□□□ -1.09
SNX3-204ENST00000426155 A0A1B0GWB2 263 aa8.26□□□□□ -1.09
SNX3-204ENST00000426155 RPL37AP8A6NKH3 93 aa8.26□□□□□ -1.09
SNX3-204ENST00000426155 Q8NDZ9 215 aa8.26□□□□□ -1.09
SNX3-204ENST00000426155 LINC00167Q96N53 147 aa8.26□□□□□ -1.09
SNX3-204ENST00000426155 SND1-IT1Q9HBX3 110 aa8.26□□□□□ -1.09
SNX3-204ENST00000426155 PLA2G2DQ9UNK4 145 aa8.26□□□□□ -1.09
SNX3-204ENST00000426155 H0Y9J4 135 aa8.25□□□□□ -1.09
SNX3-204ENST00000426155 KRTAP10-8P60410 259 aa8.25□□□□□ -1.09
SNX3-204ENST00000426155 IGLV5-37A0A075B6J1 123 aa8.24□□□□□ -1.09
SNX3-204ENST00000426155 A0A1B0GV72 72 aa8.24□□□□□ -1.09
SNX3-204ENST00000426155 TSPEAR-AS2P59090 65 aa8.24□□□□□ -1.09
SNX3-204ENST00000426155 DIRC1Q969H9 104 aa8.24□□□□□ -1.09
SNX3-204ENST00000426155 KRTAP9-9Q9BYP9 154 aa8.24□□□□□ -1.09
SNX3-204ENST00000426155 KRTAP9-4Q9BYQ2 154 aa8.24□□□□□ -1.09
SNX3-204ENST00000426155 SPANXB1Q9NS25 103 aaPredicted RBP8.24□□□□□ -1.09
SNX3-204ENST00000426155 VPREB1P12018 145 aa8.23□□□□□ -1.09
SNX3-204ENST00000426155 NKAPP1Q8N9T2 125 aa8.23□□□□□ -1.09
SNX3-204ENST00000426155 IGKV2-28A0A075B6P5 120 aa8.22□□□□□ -1.09
SNX3-204ENST00000426155 IGKV2D-28P01615 120 aa8.22□□□□□ -1.09
SNX3-204ENST00000426155 LINC00158P58513 81 aa8.22□□□□□ -1.09
SNX3-204ENST00000426155 COX17Q14061 63 aa8.22□□□□□ -1.09
SNX3-204ENST00000426155 UBR4Q5T4S7 5183 aa8.21□□□□□ -1.09
SNX3-204ENST00000426155 TRBV20-1A0A075B6N2 111 aa8.21□□□□□ -1.1
SNX3-204ENST00000426155 K7ERJ3 54 aa8.21□□□□□ -1.1
SNX3-204ENST00000426155 SFTA2Q6UW10 78 aa8.21□□□□□ -1.1
SNX3-204ENST00000426155 SCGB1D4Q6XE38 83 aa8.21□□□□□ -1.1
SNX3-204ENST00000426155 PRR26Q8N8Z3 221 aa8.21□□□□□ -1.1
SNX3-204ENST00000426155 ZNF815PA8K554 130 aa8.2□□□□□ -1.1
SNX3-204ENST00000426155 H3BMG7 143 aa8.2□□□□□ -1.1
SNX3-204ENST00000426155 ZNF861PO60384 105 aa8.2□□□□□ -1.1
SNX3-204ENST00000426155 KRTAP1-4P0C5Y4 121 aa8.2□□□□□ -1.1
SNX3-204ENST00000426155 MEIG1Q5JSS6 88 aa8.2□□□□□ -1.1
SNX3-204ENST00000426155 TTTY13Q9BZ97 58 aa8.2□□□□□ -1.1
SNX3-204ENST00000426155 BCE1O60756 84 aa8.19□□□□□ -1.1
SNX3-204ENST00000426155 NDUFA12Q9UI09 145 aa8.19□□□□□ -1.1
SNX3-204ENST00000426155 LEPROTO15243 131 aa8.17□□□□□ -1.1
SNX3-204ENST00000426155 MIR7-3HGQ8N6C7 128 aa8.17□□□□□ -1.1
SNX3-204ENST00000426155 IGLV1-50A0A075B6I6 118 aa8.16□□□□□ -1.1
SNX3-204ENST00000426155 HERV-K104P63124 156 aa8.16□□□□□ -1.1
SNX3-204ENST00000426155 ETDBQ3ZM63 59 aa8.16□□□□□ -1.1
SNX3-204ENST00000426155 PPDPFLQ8WWR9 84 aa8.16□□□□□ -1.1
SNX3-204ENST00000426155 PRO0461Q9UI25 63 aa8.16□□□□□ -1.1
SNX3-204ENST00000426155 J3QQQ9 107 aa8.15□□□□□ -1.1
SNX3-204ENST00000426155 KRTAP13-1Q8IUC0 172 aa8.15□□□□□ -1.1
SNX3-204ENST00000426155 DAND5Q8N907 189 aa8.15□□□□□ -1.1
SNX3-204ENST00000426155 PLEKHB2Q96CS7 222 aa8.15□□□□□ -1.1
SNX3-204ENST00000426155 LOC107984156A0A0G2JMH3 177 aa8.14□□□□□ -1.11
SNX3-204ENST00000426155 LGALS3P17931 250 aaKnown RBP8.14□□□□□ -1.11
SNX3-204ENST00000426155 RPL28P46779 137 aaKnown RBP8.14□□□□□ -1.11
SNX3-204ENST00000426155 PSMB2P49721 201 aa8.14□□□□□ -1.11
SNX3-204ENST00000426155 PRLHP81277 87 aa8.14□□□□□ -1.11
SNX3-204ENST00000426155 ARL17AQ8IVW1 177 aa8.14□□□□□ -1.11
SNX3-204ENST00000426155 TMEM126AQ9H061 195 aa8.14□□□□□ -1.11
SNX3-204ENST00000426155 NCR3O14931 201 aa8.13□□□□□ -1.11
SNX3-204ENST00000426155 UBE2AP49459 152 aa8.13□□□□□ -1.11
SNX3-204ENST00000426155 M0R378 163 aa8.12□□□□□ -1.11
SNX3-204ENST00000426155 TSPAN13O95857 204 aa8.12□□□□□ -1.11
SNX3-204ENST00000426155 FAM19A1Q7Z5A9 133 aa8.12□□□□□ -1.11
SNX3-204ENST00000426155 TEN1Q86WV5 123 aa8.12□□□□□ -1.11
SNX3-204ENST00000426155 PRO1854Q9UHT4 67 aa8.12□□□□□ -1.11
SNX3-204ENST00000426155 A0A087X002 238 aa8.11□□□□□ -1.11
SNX3-204ENST00000426155 SCGB1C2P0DMR2 95 aa8.11□□□□□ -1.11
SNX3-204ENST00000426155 ANAPC11Q9NYG5 84 aa8.11□□□□□ -1.11
SNX3-204ENST00000426155 LRP2P98164 4655 aa8.1□□□□□ -1.11
SNX3-204ENST00000426155 A0A0B4J2C4 111 aa8.08□□□□□ -1.12
SNX3-204ENST00000426155 NPC2P61916 151 aa8.08□□□□□ -1.12
SNX3-204ENST00000426155 A0A0J9YXY3 114 aa8.07□□□□□ -1.12
SNX3-204ENST00000426155 EIF4EBP3O60516 100 aaPredicted RBP8.07□□□□□ -1.12
SNX3-204ENST00000426155 TRBV10-3A0A0K0K1G6 114 aa8.06□□□□□ -1.12
SNX3-204ENST00000426155 CFC1BP0CG36 223 aa8.06□□□□□ -1.12
SNX3-204ENST00000426155 CFC1P0CG37 223 aa8.06□□□□□ -1.12
SNX3-204ENST00000426155 RPL13AP40429 203 aaKnown RBP8.06□□□□□ -1.12
SNX3-204ENST00000426155 ADAMTSL4-AS1Q5T5F5 129 aa8.06□□□□□ -1.12
SNX3-204ENST00000426155 SOSTDC1Q6X4U4 206 aa8.06□□□□□ -1.12
SNX3-204ENST00000426155 LPAP08519 4548 aa8.06□□□□□ -1.12
SNX3-204ENST00000426155 KRTAP4-8A0A0G2JLE6 195 aa8.05□□□□□ -1.12
SNX3-204ENST00000426155 ATXN8Q156A1 80 aa8.05□□□□□ -1.12
SNX3-204ENST00000426155 HIGD2AQ9BW72 106 aa8.05□□□□□ -1.12
SNX3-204ENST00000426155 PRYO14603 147 aa8.04□□□□□ -1.12
SNX3-204ENST00000426155 TCL1BO95988 128 aa8.04□□□□□ -1.12
SNX3-204ENST00000426155 COX6CP09669 75 aa8.04□□□□□ -1.12
SNX3-204ENST00000426155 KRTAP13-2Q52LG2 175 aa8.04□□□□□ -1.12
SNX3-204ENST00000426155 LITAFQ99732 161 aa8.03□□□□□ -1.12
SNX3-204ENST00000426155 CDIP1Q9H305 208 aa8.03□□□□□ -1.12
SNX3-204ENST00000426155 SLC25A20O43772 301 aa8.02□□□□□ -1.13
SNX3-204ENST00000426155 CRYGAP11844 174 aa8.02□□□□□ -1.13
SNX3-204ENST00000426155 SPRR1AP35321 89 aa8.02□□□□□ -1.13
SNX3-204ENST00000426155 KCNQ1DNQ9H478 68 aa8.02□□□□□ -1.13
SNX3-204ENST00000426155 A4D1N5 150 aa8.01□□□□□ -1.13
SNX3-204ENST00000426155 KRTAP4-16G5E9R7 235 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms