RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 SLC25A34Q6PIV7 304 aa8.82□□□□□ -1
CHCHD3-202ENST00000423635 ZNF73O43830 326 aaPredicted RBP8.81□□□□□ -1
CHCHD3-202ENST00000423635 NDUFC2O95298 119 aa8.81□□□□□ -1
CHCHD3-202ENST00000423635 CD164Q04900 197 aa8.81□□□□□ -1
CHCHD3-202ENST00000423635 FCGBPQ9Y6R7 5405 aaPredicted RBP8.81□□□□□ -1
CHCHD3-202ENST00000423635 Q5XG85 94 aa8.8□□□□□ -1
CHCHD3-202ENST00000423635 CFC1P0CG37 223 aa8.79□□□□□ -1
CHCHD3-202ENST00000423635 LAMTOR3Q9UHA4 124 aa8.79□□□□□ -1
CHCHD3-202ENST00000423635 TMEM218A2RU14 115 aa8.78□□□□□ -1
CHCHD3-202ENST00000423635 C1orf195Q5TG92 126 aa8.78□□□□□ -1
CHCHD3-202ENST00000423635 IFI27L1Q96BM0 104 aa8.78□□□□□ -1
CHCHD3-202ENST00000423635 MIEN1Q9BRT3 115 aa8.77□□□□□ -1.01
CHCHD3-202ENST00000423635 KRTAP9-8Q9BYQ0 159 aa8.77□□□□□ -1.01
CHCHD3-202ENST00000423635 HINT1P49773 126 aaPredicted RBP8.76□□□□□ -1.01
CHCHD3-202ENST00000423635 TRAPPC1Q9Y5R8 145 aa8.76□□□□□ -1.01
CHCHD3-202ENST00000423635 TSPEAR-AS2P59090 65 aa8.75□□□□□ -1.01
CHCHD3-202ENST00000423635 IFITM2Q01629 132 aa8.75□□□□□ -1.01
CHCHD3-202ENST00000423635 RPS10P5Q9NQ39 176 aa8.75□□□□□ -1.01
CHCHD3-202ENST00000423635 UQCC3Q6UW78 93 aa8.74□□□□□ -1.01
CHCHD3-202ENST00000423635 PRO1933Q9H354 126 aa8.74□□□□□ -1.01
CHCHD3-202ENST00000423635 LEPROTO15243 131 aa8.73□□□□□ -1.01
CHCHD3-202ENST00000423635 DHRS4-AS1Q9P1J3 65 aa8.73□□□□□ -1.01
CHCHD3-202ENST00000423635 CBY1Q9Y3M2 126 aa8.73□□□□□ -1.01
CHCHD3-202ENST00000423635 H7C2G1 150 aa8.72□□□□□ -1.01
CHCHD3-202ENST00000423635 COMMD7Q86VX2 200 aa8.72□□□□□ -1.01
CHCHD3-202ENST00000423635 CLLU1Q5K131 121 aa8.71□□□□□ -1.02
CHCHD3-202ENST00000423635 SOSTDC1Q6X4U4 206 aa8.71□□□□□ -1.02
CHCHD3-202ENST00000423635 SYNE2Q8WXH0 6885 aaKnown RBP8.71□□□□□ -1.02
CHCHD3-202ENST00000423635 EIF4EBP3O60516 100 aaPredicted RBP8.7□□□□□ -1.02
CHCHD3-202ENST00000423635 Q6Q795 121 aa8.7□□□□□ -1.02
CHCHD3-202ENST00000423635 SMIM29Q86T20 159 aa8.7□□□□□ -1.02
CHCHD3-202ENST00000423635 CHCHD1Q96BP2 118 aaKnown RBP8.7□□□□□ -1.02
CHCHD3-202ENST00000423635 MACF1Q9UPN3 7388 aaKnown RBP8.68□□□□□ -1.02
CHCHD3-202ENST00000423635 J3QQQ9 107 aa8.68□□□□□ -1.02
CHCHD3-202ENST00000423635 NMUP48645 174 aa8.68□□□□□ -1.02
CHCHD3-202ENST00000423635 AKR1D1P51857 326 aa8.68□□□□□ -1.02
CHCHD3-202ENST00000423635 Q1RN00 199 aa8.67□□□□□ -1.02
CHCHD3-202ENST00000423635 TAL2Q16559 108 aa8.66□□□□□ -1.02
CHCHD3-202ENST00000423635 RHEBQ15382 184 aa8.65□□□□□ -1.02
CHCHD3-202ENST00000423635 ADAMTSL4-AS1Q5T5F5 129 aa8.65□□□□□ -1.02
CHCHD3-202ENST00000423635 TEX49A0A1B0GTD5 131 aa8.64□□□□□ -1.03
CHCHD3-202ENST00000423635 NPC2P61916 151 aa8.64□□□□□ -1.03
CHCHD3-202ENST00000423635 KRTAP19-1Q8IUB9 90 aa8.64□□□□□ -1.03
CHCHD3-202ENST00000423635 ELOF1P60002 83 aaKnown RBP8.63□□□□□ -1.03
CHCHD3-202ENST00000423635 C10orf91Q5T1B1 145 aa8.63□□□□□ -1.03
CHCHD3-202ENST00000423635 DEFB105AQ8NG35 78 aa8.63□□□□□ -1.03
CHCHD3-202ENST00000423635 LGALS3P17931 250 aaKnown RBP8.61□□□□□ -1.03
CHCHD3-202ENST00000423635 PLNP26678 52 aa8.61□□□□□ -1.03
CHCHD3-202ENST00000423635 A0A0G2JQZ4 141 aa8.6□□□□□ -1.03
CHCHD3-202ENST00000423635 A0A0J9YXY3 114 aa8.6□□□□□ -1.03
CHCHD3-202ENST00000423635 H0Y8G0 127 aa8.6□□□□□ -1.03
CHCHD3-202ENST00000423635 COX7BP24311 80 aa8.6□□□□□ -1.03
CHCHD3-202ENST00000423635 ATP11AUNQ6ZP68 121 aa8.6□□□□□ -1.03
CHCHD3-202ENST00000423635 OR13C6PQ8NH95 151 aa8.6□□□□□ -1.03
CHCHD3-202ENST00000423635 SPANXCQ9NY87 97 aa8.6□□□□□ -1.03
CHCHD3-202ENST00000423635 HERVK_113P61574 105 aa8.59□□□□□ -1.03
CHCHD3-202ENST00000423635 TCL1BO95988 128 aa8.58□□□□□ -1.04
CHCHD3-202ENST00000423635 C20orf202A1L168 122 aa8.57□□□□□ -1.04
CHCHD3-202ENST00000423635 C6orf99Q4VX62 202 aa8.57□□□□□ -1.04
CHCHD3-202ENST00000423635 Q75L30 129 aa8.57□□□□□ -1.04
CHCHD3-202ENST00000423635 SPANXDQ9BXN6 97 aa8.57□□□□□ -1.04
CHCHD3-202ENST00000423635 IGLV5-48A0A075B6I7 105 aa8.56□□□□□ -1.04
CHCHD3-202ENST00000423635 HSBP1O75506 76 aa8.56□□□□□ -1.04
CHCHD3-202ENST00000423635 LINC00308Q8TCZ7 52 aa8.56□□□□□ -1.04
CHCHD3-202ENST00000423635 DPM2O94777 84 aa8.54□□□□□ -1.04
CHCHD3-202ENST00000423635 MT2AP02795 61 aa8.54□□□□□ -1.04
CHCHD3-202ENST00000423635 TRBV7-6A0A0J9YX20 115 aa8.54□□□□□ -1.04
CHCHD3-202ENST00000423635 LEPROTL1O95214 131 aa8.54□□□□□ -1.04
CHCHD3-202ENST00000423635 LITAFQ99732 161 aa8.54□□□□□ -1.04
CHCHD3-202ENST00000423635 IGKCP01834 107 aa8.53□□□□□ -1.04
CHCHD3-202ENST00000423635 LINC00518Q8N0U6 118 aa8.52□□□□□ -1.05
CHCHD3-202ENST00000423635 PCP2Q8IVA1 136 aa8.51□□□□□ -1.05
CHCHD3-202ENST00000423635 PMCHL2Q9BQD1 86 aa8.51□□□□□ -1.05
CHCHD3-202ENST00000423635 E9PLD3 99 aa8.5□□□□□ -1.05
CHCHD3-202ENST00000423635 OBSCN-AS1Q96MR7 158 aa8.5□□□□□ -1.05
CHCHD3-202ENST00000423635 KRTAP9-3Q9BYQ3 159 aa8.5□□□□□ -1.05
CHCHD3-202ENST00000423635 TIMM17BO60830 172 aa8.49□□□□□ -1.05
CHCHD3-202ENST00000423635 A0A1B0GWB2 263 aa8.48□□□□□ -1.05
CHCHD3-202ENST00000423635 MT1FP04733 61 aa8.48□□□□□ -1.05
CHCHD3-202ENST00000423635 YPEL4Q96NS1 127 aa8.47□□□□□ -1.05
CHCHD3-202ENST00000423635 HSPB8Q9UJY1 196 aa8.46□□□□□ -1.06
CHCHD3-202ENST00000423635 TRBV20-1A0A075B6N2 111 aa8.45□□□□□ -1.06
CHCHD3-202ENST00000423635 LINC00310P59036 64 aa8.45□□□□□ -1.06
CHCHD3-202ENST00000423635 SERF1AO75920 110 aa8.42□□□□□ -1.06
CHCHD3-202ENST00000423635 FABP4P15090 132 aa8.42□□□□□ -1.06
CHCHD3-202ENST00000423635 TRBV7-7A0A0K0K1E9 115 aa8.41□□□□□ -1.06
CHCHD3-202ENST00000423635 A4D1N5 150 aa8.41□□□□□ -1.06
CHCHD3-202ENST00000423635 LINC00846Q9NV44 126 aa8.41□□□□□ -1.06
CHCHD3-202ENST00000423635 SNAPINO95295 136 aa8.4□□□□□ -1.06
CHCHD3-202ENST00000423635 APOC3P02656 99 aa8.4□□□□□ -1.06
CHCHD3-202ENST00000423635 KRTAP10-10P60014 251 aa8.4□□□□□ -1.06
CHCHD3-202ENST00000423635 Q96NJ1 140 aa8.4□□□□□ -1.06
CHCHD3-202ENST00000423635 C20orf166-AS1Q96NR2 134 aa8.4□□□□□ -1.06
CHCHD3-202ENST00000423635 KRTAP19-6Q3LI70 58 aa8.38□□□□□ -1.07
CHCHD3-202ENST00000423635 SVBPQ8N300 66 aa8.38□□□□□ -1.07
CHCHD3-202ENST00000423635 NHP2Q9NX24 153 aaKnown RBP8.38□□□□□ -1.07
CHCHD3-202ENST00000423635 A8MUU9 505 aa8.37□□□□□ -1.07
CHCHD3-202ENST00000423635 F8WEM9 126 aa8.37□□□□□ -1.07
CHCHD3-202ENST00000423635 Q6JHZ5 121 aa8.37□□□□□ -1.07
CHCHD3-202ENST00000423635 ZNF815PA8K554 130 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms