RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 DEFB116Q30KQ4 102 aa10.26□□□□□ -0.77
SHISA9-201ENST00000423335 FAM104AQ969W3 186 aa10.26□□□□□ -0.77
SHISA9-201ENST00000423335 CRYGAP11844 174 aa10.25□□□□□ -0.77
SHISA9-201ENST00000423335 OTOGQ6ZRI0 2925 aa10.25□□□□□ -0.77
SHISA9-201ENST00000423335 NUPR2A6NF83 97 aa10.25□□□□□ -0.77
SHISA9-201ENST00000423335 NDUFB1O75438 58 aa10.25□□□□□ -0.77
SHISA9-201ENST00000423335 C6orf48Q9UBA6 75 aa10.25□□□□□ -0.77
SHISA9-201ENST00000423335 C14orf177Q52M58 125 aa10.24□□□□□ -0.77
SHISA9-201ENST00000423335 C1orf137Q5JT78 98 aa10.24□□□□□ -0.77
SHISA9-201ENST00000423335 CSMD2Q7Z408 3487 aa10.23□□□□□ -0.77
SHISA9-201ENST00000423335 LINC01561Q8N1V8 128 aa10.22□□□□□ -0.77
SHISA9-201ENST00000423335 DHRS4-AS1Q9P1J3 65 aa10.21□□□□□ -0.78
SHISA9-201ENST00000423335 PLAC8L1A1L4L8 177 aa10.2□□□□□ -0.78
SHISA9-201ENST00000423335 NDUFC1O43677 76 aa10.2□□□□□ -0.78
SHISA9-201ENST00000423335 TMEM254Q8TBM7 123 aa10.19□□□□□ -0.78
SHISA9-201ENST00000423335 NBPF19A0A087WUL8 3843 aa10.19□□□□□ -0.78
SHISA9-201ENST00000423335 C4orf26Q17RF5 130 aa10.18□□□□□ -0.78
SHISA9-201ENST00000423335 TENM1Q9UKZ4 2725 aa10.18□□□□□ -0.78
SHISA9-201ENST00000423335 SMIM26A0A096LP01 95 aa10.18□□□□□ -0.78
SHISA9-201ENST00000423335 Q6ZQT0 140 aa10.18□□□□□ -0.78
SHISA9-201ENST00000423335 SERP1Q9Y6X1 66 aa10.17□□□□□ -0.78
SHISA9-201ENST00000423335 LINC00588Q9Y4M8 146 aa10.17□□□□□ -0.78
SHISA9-201ENST00000423335 PKD1L1Q8TDX9 2849 aa10.16□□□□□ -0.78
SHISA9-201ENST00000423335 KIAA0087Q14695 138 aa10.15□□□□□ -0.78
SHISA9-201ENST00000423335 SPTSSBQ8NFR3 76 aa10.15□□□□□ -0.79
SHISA9-201ENST00000423335 TM2D3Q9BRN9 247 aa10.14□□□□□ -0.79
SHISA9-201ENST00000423335 IGKV4-1P06312 121 aa10.14□□□□□ -0.79
SHISA9-201ENST00000423335 B9D2Q9BPU9 175 aa10.14□□□□□ -0.79
SHISA9-201ENST00000423335 PRYO14603 147 aa10.13□□□□□ -0.79
SHISA9-201ENST00000423335 A0A087WSZ3 146 aa10.12□□□□□ -0.79
SHISA9-201ENST00000423335 PRLHP81277 87 aa10.12□□□□□ -0.79
SHISA9-201ENST00000423335 C7orf33Q8WU49 177 aa10.12□□□□□ -0.79
SHISA9-201ENST00000423335 LINC00208Q96KT6 92 aa10.12□□□□□ -0.79
SHISA9-201ENST00000423335 LINC01556Q5JQF7 62 aa10.11□□□□□ -0.79
SHISA9-201ENST00000423335 CXCL6P80162 114 aa10.1□□□□□ -0.79
SHISA9-201ENST00000423335 SPINK6Q6UWN8 80 aa10.1□□□□□ -0.79
SHISA9-201ENST00000423335 IGLV9-49A0A0B4J1Y8 123 aa10.1□□□□□ -0.79
SHISA9-201ENST00000423335 C1orf134Q5TEV5 83 aa10.1□□□□□ -0.79
SHISA9-201ENST00000423335 C2orf48Q96LS8 159 aa10.09□□□□□ -0.79
SHISA9-201ENST00000423335 TRBV7-6A0A0J9YX20 115 aa10.09□□□□□ -0.79
SHISA9-201ENST00000423335 MRPL55Q7Z7F7 128 aaKnown RBP10.08□□□□□ -0.8
SHISA9-201ENST00000423335 ATP5EP56381 51 aaPredicted RBP10.08□□□□□ -0.8
SHISA9-201ENST00000423335 SMIM29Q86T20 159 aa10.08□□□□□ -0.8
SHISA9-201ENST00000423335 IGLV5-52A0A0A0MRZ9 124 aa10.07□□□□□ -0.8
SHISA9-201ENST00000423335 ELOF1P60002 83 aaKnown RBP10.07□□□□□ -0.8
SHISA9-201ENST00000423335 REG3GQ6UW15 175 aa10.07□□□□□ -0.8
SHISA9-201ENST00000423335 C22orf24Q9Y442 160 aa10.07□□□□□ -0.8
SHISA9-201ENST00000423335 PSPHP1O15172 72 aa10.07□□□□□ -0.8
SHISA9-201ENST00000423335 VWFP04275 2813 aa10.06□□□□□ -0.8
SHISA9-201ENST00000423335 PDZD2O15018 2839 aa10.06□□□□□ -0.8
SHISA9-201ENST00000423335 Q6ZRP5 223 aa10.05□□□□□ -0.8
SHISA9-201ENST00000423335 ST20-AS1Q8NBB2 130 aa10.05□□□□□ -0.8
SHISA9-201ENST00000423335 LINC00167Q96N53 147 aa10.05□□□□□ -0.8
SHISA9-201ENST00000423335 BSNQ9UPA5 3926 aa10.05□□□□□ -0.8
SHISA9-201ENST00000423335 IGLV6-57P01721 117 aa10.05□□□□□ -0.8
SHISA9-201ENST00000423335 LOC110117498A0A087WWA1 95 aa10.04□□□□□ -0.8
SHISA9-201ENST00000423335 RPS28P62857 69 aaKnown RBP10.04□□□□□ -0.8
SHISA9-201ENST00000423335 CHTF8P0CG12 524 aa10.03□□□□□ -0.8
SHISA9-201ENST00000423335 VPREB1P12018 145 aa10.03□□□□□ -0.8
SHISA9-201ENST00000423335 C4orf48Q5BLP8 95 aa10.02□□□□□ -0.81
SHISA9-201ENST00000423335 CHKB-CPT1BH3BT56 60 aa10.01□□□□□ -0.81
SHISA9-201ENST00000423335 DNAH10OSP0CZ25 163 aa10.01□□□□□ -0.81
SHISA9-201ENST00000423335 Q9BRP9 147 aa10.01□□□□□ -0.81
SHISA9-201ENST00000423335 FAM168BA1KXE4 195 aa10□□□□□ -0.81
SHISA9-201ENST00000423335 NBDYA0A0U1RRE5 68 aa9.98□□□□□ -0.81
SHISA9-201ENST00000423335 H3BNG1 76 aa9.98□□□□□ -0.81
SHISA9-201ENST00000423335 PCOTHQ58A44 107 aa9.98□□□□□ -0.81
SHISA9-201ENST00000423335 SERTAD4-AS1Q5TG53 156 aa9.97□□□□□ -0.81
SHISA9-201ENST00000423335 LINC01600Q96MT4 127 aa9.97□□□□□ -0.81
SHISA9-201ENST00000423335 A0A0G2JQZ4 141 aa9.97□□□□□ -0.81
SHISA9-201ENST00000423335 A0A1W2PNN7 141 aa9.97□□□□□ -0.81
SHISA9-201ENST00000423335 CASC2Q6XLA1 102 aa9.96□□□□□ -0.81
SHISA9-201ENST00000423335 C1orf195Q5TG92 126 aa9.96□□□□□ -0.82
SHISA9-201ENST00000423335 DMBT1Q9UGM3 2413 aaPredicted RBP9.96□□□□□ -0.82
SHISA9-201ENST00000423335 HCG22E2RYF7 251 aa9.95□□□□□ -0.82
SHISA9-201ENST00000423335 CASC10Q5T4H9 136 aa9.95□□□□□ -0.82
SHISA9-201ENST00000423335 A6NED7 52 aa9.94□□□□□ -0.82
SHISA9-201ENST00000423335 Q6ZRX8 168 aa9.94□□□□□ -0.82
SHISA9-201ENST00000423335 PRR34Q9NV39 138 aa9.94□□□□□ -0.82
SHISA9-201ENST00000423335 LINC00474Q9P2X8 69 aa9.94□□□□□ -0.82
SHISA9-201ENST00000423335 WWC2-AS2Q96NR7 200 aa9.94□□□□□ -0.82
SHISA9-201ENST00000423335 LINC00612Q8N6U2 182 aa9.94□□□□□ -0.82
SHISA9-201ENST00000423335 TENM3Q9P273 2699 aa9.94□□□□□ -0.82
SHISA9-201ENST00000423335 LINC00528Q8N1L1 170 aa9.93□□□□□ -0.82
SHISA9-201ENST00000423335 CYSTM1Q9H1C7 97 aa9.93□□□□□ -0.82
SHISA9-201ENST00000423335 GVQW2A0A096LPI5 108 aaPredicted RBP9.93□□□□□ -0.82
SHISA9-201ENST00000423335 Q8NBF4 154 aa9.92□□□□□ -0.82
SHISA9-201ENST00000423335 H0Y9P7 68 aa9.91□□□□□ -0.82
SHISA9-201ENST00000423335 RPL37AP61513 92 aaKnown RBP9.91□□□□□ -0.82
SHISA9-201ENST00000423335 Q8NDZ9 215 aa9.91□□□□□ -0.82
SHISA9-201ENST00000423335 LINC00476Q8WZB0 136 aa9.91□□□□□ -0.82
SHISA9-201ENST00000423335 V9GYY9 64 aa9.91□□□□□ -0.82
SHISA9-201ENST00000423335 IGHV6-1A0A0B4J1U7 121 aa9.9□□□□□ -0.82
SHISA9-201ENST00000423335 PHF5AQ7RTV0 110 aaKnown RBP9.9□□□□□ -0.82
SHISA9-201ENST00000423335 C15orf56Q8N910 161 aa9.9□□□□□ -0.82
SHISA9-201ENST00000423335 H7BZZ5 65 aa9.9□□□□□ -0.83
SHISA9-201ENST00000423335 BCE1O60756 84 aa9.89□□□□□ -0.83
SHISA9-201ENST00000423335 OBSCN-AS1Q96MR7 158 aa9.88□□□□□ -0.83
SHISA9-201ENST00000423335 TRBV7-4A0A0J9YYF1 115 aa9.88□□□□□ -0.83
SHISA9-201ENST00000423335 PRR15LQ9BU68 103 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms