RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 WIPF1O43516 503 aa8.09□□□□□ -1.11
CLCN4-203ENST00000421085 SPANXA2-OT1Q8N9U9 137 aa8.09□□□□□ -1.11
CLCN4-203ENST00000421085 ZFYVE26Q68DK2 2539 aa8.08□□□□□ -1.12
CLCN4-203ENST00000421085 A0A1W2PNM2 257 aa8.07□□□□□ -1.12
CLCN4-203ENST00000421085 PCSK5Q92824 1860 aa8.06□□□□□ -1.12
CLCN4-203ENST00000421085 USP9YO00507 2555 aaPredicted RBP8.06□□□□□ -1.12
CLCN4-203ENST00000421085 Q1T7F1 81 aa8.05□□□□□ -1.12
CLCN4-203ENST00000421085 GIG44P09565 113 aaPredicted RBP8.03□□□□□ -1.12
CLCN4-203ENST00000421085 PLA2G2DQ9UNK4 145 aa8.03□□□□□ -1.12
CLCN4-203ENST00000421085 OCR1Q9BZK8 76 aa8.03□□□□□ -1.12
CLCN4-203ENST00000421085 PIEZO1Q92508 2521 aa8.02□□□□□ -1.13
CLCN4-203ENST00000421085 TLX1NBP0CAT3 122 aa8.01□□□□□ -1.13
CLCN4-203ENST00000421085 KRTAP24-1Q3LI83 254 aa8.01□□□□□ -1.13
CLCN4-203ENST00000421085 ANAPC11Q9NYG5 84 aa8□□□□□ -1.13
CLCN4-203ENST00000421085 ZNF861PO60384 105 aa8□□□□□ -1.13
CLCN4-203ENST00000421085 FAM104AQ969W3 186 aa7.99□□□□□ -1.13
CLCN4-203ENST00000421085 Q5XG85 94 aa7.98□□□□□ -1.13
CLCN4-203ENST00000421085 LINC00612Q8N6U2 182 aa7.98□□□□□ -1.13
CLCN4-203ENST00000421085 C9orf92A6NGG3 77 aa7.98□□□□□ -1.13
CLCN4-203ENST00000421085 ANKRD11Q6UB99 2663 aaPredicted RBP7.97□□□□□ -1.13
CLCN4-203ENST00000421085 IGLV5-48A0A075B6I7 105 aa7.97□□□□□ -1.13
CLCN4-203ENST00000421085 C19orf73Q9NVV2 129 aa7.97□□□□□ -1.13
CLCN4-203ENST00000421085 RBM12B-AS1Q9P1G2 102 aa7.96□□□□□ -1.13
CLCN4-203ENST00000421085 PRR26Q8N8Z3 221 aa7.95□□□□□ -1.14
CLCN4-203ENST00000421085 A0A0D9SG42 100 aa7.95□□□□□ -1.14
CLCN4-203ENST00000421085 ZNF575Q86XF7 245 aa7.95□□□□□ -1.14
CLCN4-203ENST00000421085 FAM229BQ4G0N7 80 aa7.95□□□□□ -1.14
CLCN4-203ENST00000421085 Q8N1X5 172 aa7.94□□□□□ -1.14
CLCN4-203ENST00000421085 CEP295Q9C0D2 2601 aa7.94□□□□□ -1.14
CLCN4-203ENST00000421085 C9orf163Q8N9P6 203 aa7.94□□□□□ -1.14
CLCN4-203ENST00000421085 LINC00304Q8N9R0 145 aa7.93□□□□□ -1.14
CLCN4-203ENST00000421085 CYSTM1Q9H1C7 97 aa7.93□□□□□ -1.14
CLCN4-203ENST00000421085 KRTAP10-11P60412 298 aa7.92□□□□□ -1.14
CLCN4-203ENST00000421085 CASC10Q5T4H9 136 aa7.92□□□□□ -1.14
CLCN4-203ENST00000421085 SPRR4Q96PI1 79 aa7.92□□□□□ -1.14
CLCN4-203ENST00000421085 MTORP42345 2549 aa7.92□□□□□ -1.14
CLCN4-203ENST00000421085 Q75L30 129 aa7.91□□□□□ -1.14
CLCN4-203ENST00000421085 FP248Q71RG6 208 aaPredicted RBP7.9□□□□□ -1.15
CLCN4-203ENST00000421085 A0A096LNT2 108 aa7.89□□□□□ -1.15
CLCN4-203ENST00000421085 IGLV7-46A0A075B6I9 117 aa7.89□□□□□ -1.15
CLCN4-203ENST00000421085 F8P00451 2351 aa7.89□□□□□ -1.15
CLCN4-203ENST00000421085 ANKRD17O75179 2603 aaKnown RBP7.88□□□□□ -1.15
CLCN4-203ENST00000421085 PSORS1C2Q9UIG4 136 aa7.88□□□□□ -1.15
CLCN4-203ENST00000421085 IGLV7-43P04211 117 aa7.87□□□□□ -1.15
CLCN4-203ENST00000421085 A0A087WTM6 91 aa7.86□□□□□ -1.15
CLCN4-203ENST00000421085 POLQO75417 2590 aa7.86□□□□□ -1.15
CLCN4-203ENST00000421085 KRTAP10-3P60369 221 aa7.86□□□□□ -1.15
CLCN4-203ENST00000421085 IGLV5-37A0A075B6J1 123 aa7.85□□□□□ -1.15
CLCN4-203ENST00000421085 LINC01554Q52M75 96 aa7.85□□□□□ -1.15
CLCN4-203ENST00000421085 Q8N9P0 234 aaPredicted RBP7.84□□□□□ -1.15
CLCN4-203ENST00000421085 K7EIL1 84 aa7.83□□□□□ -1.16
CLCN4-203ENST00000421085 CNBPP62633 177 aaKnown RBP7.83□□□□□ -1.16
CLCN4-203ENST00000421085 PRAC1Q96KF2 57 aa7.83□□□□□ -1.16
CLCN4-203ENST00000421085 GOLGB1Q14789 3259 aaKnown RBP7.82□□□□□ -1.16
CLCN4-203ENST00000421085 H3BS24 57 aa7.82□□□□□ -1.16
CLCN4-203ENST00000421085 LINC01558Q9Y6Z2 57 aa7.81□□□□□ -1.16
CLCN4-203ENST00000421085 CR1P17927 2039 aa7.8□□□□□ -1.16
CLCN4-203ENST00000421085 COX6B2Q6YFQ2 88 aa7.8□□□□□ -1.16
CLCN4-203ENST00000421085 SPTBN4Q9H254 2564 aa7.8□□□□□ -1.16
CLCN4-203ENST00000421085 LUZP6Q538Z0 58 aa7.8□□□□□ -1.16
CLCN4-203ENST00000421085 HRES1P13985 223 aa7.8□□□□□ -1.16
CLCN4-203ENST00000421085 CHD8Q9HCK8 2581 aa7.8□□□□□ -1.16
CLCN4-203ENST00000421085 ACANP16112 2415 aa7.79□□□□□ -1.16
CLCN4-203ENST00000421085 Q5VV11 94 aa7.78□□□□□ -1.16
CLCN4-203ENST00000421085 A0A1B0GU33 70 aa7.78□□□□□ -1.16
CLCN4-203ENST00000421085 WWC2-AS2Q96NR7 200 aa7.78□□□□□ -1.16
CLCN4-203ENST00000421085 SMR3BP02814 79 aaPredicted RBP7.76□□□□□ -1.17
CLCN4-203ENST00000421085 OXTP01178 125 aa7.75□□□□□ -1.17
CLCN4-203ENST00000421085 MMP24-AS1A0A0U1RRL7 71 aa7.73□□□□□ -1.17
CLCN4-203ENST00000421085 Q8NDZ9 215 aa7.73□□□□□ -1.17
CLCN4-203ENST00000421085 SPINK7P58062 85 aa7.72□□□□□ -1.17
CLCN4-203ENST00000421085 CSAG1Q6PB30 78 aa7.71□□□□□ -1.17
CLCN4-203ENST00000421085 J3QL48 77 aa7.69□□□□□ -1.18
CLCN4-203ENST00000421085 PRRC2CQ9Y520 2896 aaKnown RBP7.67□□□□□ -1.18
CLCN4-203ENST00000421085 DNAH12Q6ZR08 3092 aa7.65□□□□□ -1.18
CLCN4-203ENST00000421085 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.63□□□□□ -1.19
CLCN4-203ENST00000421085 SPRR1AP35321 89 aa7.62□□□□□ -1.19
CLCN4-203ENST00000421085 DMAC1Q96GE9 116 aa7.61□□□□□ -1.19
CLCN4-203ENST00000421085 LINC00472Q9H8W2 130 aa7.6□□□□□ -1.19
CLCN4-203ENST00000421085 Q5W150 140 aa7.6□□□□□ -1.19
CLCN4-203ENST00000421085 BPTFQ12830 3046 aa7.59□□□□□ -1.19
CLCN4-203ENST00000421085 KRTAP1-3Q8IUG1 177 aa7.59□□□□□ -1.19
CLCN4-203ENST00000421085 CAMK2N1Q7Z7J9 78 aa7.58□□□□□ -1.2
CLCN4-203ENST00000421085 ZCCHC13Q8WW36 166 aaKnown RBP7.58□□□□□ -1.2
CLCN4-203ENST00000421085 LINC00483Q53H64 154 aa7.56□□□□□ -1.2
CLCN4-203ENST00000421085 KRTAP1-1Q07627 177 aa7.54□□□□□ -1.2
CLCN4-203ENST00000421085 USP24Q9UPU5 2620 aa7.54□□□□□ -1.2
CLCN4-203ENST00000421085 TNP2Q05952 138 aa7.54□□□□□ -1.2
CLCN4-203ENST00000421085 UTRNP46939 3433 aa7.54□□□□□ -1.2
CLCN4-203ENST00000421085 Q6ZSA8 131 aa7.53□□□□□ -1.2
CLCN4-203ENST00000421085 FASNP49327 2511 aaKnown RBP7.52□□□□□ -1.21
CLCN4-203ENST00000421085 A0A0A0MQY5 61 aa7.52□□□□□ -1.21
CLCN4-203ENST00000421085 SPRR1BP22528 89 aa7.51□□□□□ -1.21
CLCN4-203ENST00000421085 S4R3F8 94 aa7.5□□□□□ -1.21
CLCN4-203ENST00000421085 KRTAP26-1Q6PEX3 210 aa7.48□□□□□ -1.21
CLCN4-203ENST00000421085 PLAC8Q9NZF1 115 aa7.47□□□□□ -1.21
CLCN4-203ENST00000421085 ROMO1P60602 79 aa7.46□□□□□ -1.22
CLCN4-203ENST00000421085 CEP350Q5VT06 3117 aa7.43□□□□□ -1.22
CLCN4-203ENST00000421085 RPL37P61927 97 aaKnown RBP7.43□□□□□ -1.22
CLCN4-203ENST00000421085 MGAM2Q2M2H8 2515 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms