RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 C7orf33Q8WU49 177 aa7.68□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 NOTCH1P46531 2555 aa7.68□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 RPL37AP8A6NKH3 93 aa7.68□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 CYSTM1Q9H1C7 97 aa7.68□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 BAHCC1Q9P281 2608 aa7.68□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 KCNQ1DNQ9H478 68 aa7.67□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 PKD1L1Q8TDX9 2849 aa7.67□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 BCE1O60756 84 aa7.67□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 SERTAD4-AS1Q5TG53 156 aa7.67□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 DHRS4-AS1Q9P1J3 65 aa7.67□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 FUSP35637 526 aaKnown RBP eCLIP7.66□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 C3orf84H3BNL1 204 aa7.66□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 PRB2P02812 416 aaPredicted RBP7.66□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 RPS28P62857 69 aaKnown RBP7.65□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 LINC00588Q9Y4M8 146 aa7.65□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 TENM3Q9P273 2699 aa7.64□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 BPY2O14599 106 aa7.64□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 UBE2BP63146 152 aa7.64□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 FAM19A5Q7Z5A7 132 aaPredicted RBP7.63□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 DPH3Q96FX2 82 aa7.63□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 PRYO14603 147 aa7.62□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 TLX1NBP0CAT3 122 aa7.62□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 Q6ZRX8 168 aa7.62□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 SNURFQ9Y675 71 aa7.61□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 FAM236DA0A1B0GTK5 79 aa7.61□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 FAM168BA1KXE4 195 aa7.61□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 FAM236CP0DP71 79 aa7.61□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 Q8N377 158 aa7.61□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 Q8N9L7 120 aa7.61□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 PSCAO43653 123 aa7.6□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 MRPL55Q7Z7F7 128 aaKnown RBP7.6□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 PLA2G2DQ9UNK4 145 aa7.6□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 CASC10Q5T4H9 136 aa7.6□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 IGLV1-50A0A075B6I6 118 aa7.59□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 F8WEM9 126 aa7.59□□□□□ -1.19
CSPG4P3Y-201ENST00000418188 C1orf137Q5JT78 98 aa7.58□□□□□ -1.2
CSPG4P3Y-201ENST00000418188 COL6A5A8TX70 2615 aa7.58□□□□□ -1.2
CSPG4P3Y-201ENST00000418188 TM2D3Q9BRN9 247 aa7.57□□□□□ -1.2
CSPG4P3Y-201ENST00000418188 UBE2DNLQ8IWF7 75 aa7.57□□□□□ -1.2
CSPG4P3Y-201ENST00000418188 IGKV2-24A0A0C4DH68 120 aa7.56□□□□□ -1.2
CSPG4P3Y-201ENST00000418188 IGLV5-48A0A075B6I7 105 aa7.56□□□□□ -1.2
CSPG4P3Y-201ENST00000418188 KLKP1Q107X0 134 aa7.56□□□□□ -1.2
CSPG4P3Y-201ENST00000418188 ST20-AS1Q8NBB2 130 aa7.56□□□□□ -1.2
CSPG4P3Y-201ENST00000418188 Q9BRP9 147 aa7.55□□□□□ -1.2
CSPG4P3Y-201ENST00000418188 IGLV5-37A0A075B6J1 123 aa7.55□□□□□ -1.2
CSPG4P3Y-201ENST00000418188 NDUFC1O43677 76 aa7.55□□□□□ -1.2
CSPG4P3Y-201ENST00000418188 REG3GQ6UW15 175 aa7.55□□□□□ -1.2
CSPG4P3Y-201ENST00000418188 A0A1B0GW54 56 aa7.54□□□□□ -1.2
CSPG4P3Y-201ENST00000418188 FBN1P35555 2871 aaKnown RBP7.54□□□□□ -1.2
CSPG4P3Y-201ENST00000418188 H7BZZ5 65 aa7.54□□□□□ -1.2
CSPG4P3Y-201ENST00000418188 NBEAL1Q6ZS30 2694 aa7.53□□□□□ -1.2
CSPG4P3Y-201ENST00000418188 IGKV4-1P06312 121 aa7.53□□□□□ -1.2
CSPG4P3Y-201ENST00000418188 TMEM254Q8TBM7 123 aa7.53□□□□□ -1.2
CSPG4P3Y-201ENST00000418188 SPRR1AP35321 89 aa7.52□□□□□ -1.21
CSPG4P3Y-201ENST00000418188 MGAM2Q2M2H8 2515 aa7.52□□□□□ -1.21
CSPG4P3Y-201ENST00000418188 Q8NBF4 154 aa7.52□□□□□ -1.21
CSPG4P3Y-201ENST00000418188 K7EIL1 84 aa7.52□□□□□ -1.21
CSPG4P3Y-201ENST00000418188 HIGD2AQ9BW72 106 aa7.51□□□□□ -1.21
CSPG4P3Y-201ENST00000418188 A0A1W2PNM2 257 aa7.51□□□□□ -1.21
CSPG4P3Y-201ENST00000418188 KRTAP4-16G5E9R7 235 aaPredicted RBP7.51□□□□□ -1.21
CSPG4P3Y-201ENST00000418188 ERC2-IT1O76042 136 aa7.5□□□□□ -1.21
CSPG4P3Y-201ENST00000418188 SERP1Q9Y6X1 66 aa7.5□□□□□ -1.21
CSPG4P3Y-201ENST00000418188 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.5□□□□□ -1.21
CSPG4P3Y-201ENST00000418188 PRLHP81277 87 aa7.48□□□□□ -1.21
CSPG4P3Y-201ENST00000418188 C14orf177Q52M58 125 aa7.48□□□□□ -1.21
CSPG4P3Y-201ENST00000418188 C16orf90A8MZG2 172 aa7.47□□□□□ -1.21
CSPG4P3Y-201ENST00000418188 A0A096LNI7 61 aa7.47□□□□□ -1.21
CSPG4P3Y-201ENST00000418188 ATP5EP56381 51 aaPredicted RBP7.47□□□□□ -1.21
CSPG4P3Y-201ENST00000418188 KRTAP7-1Q8IUC3 87 aa7.47□□□□□ -1.21
CSPG4P3Y-201ENST00000418188 OXTP01178 125 aa7.46□□□□□ -1.21
CSPG4P3Y-201ENST00000418188 C5orf47Q569G3 176 aa7.46□□□□□ -1.21
CSPG4P3Y-201ENST00000418188 TNP2Q05952 138 aa7.46□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 SMIM29Q86T20 159 aa7.46□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 LINC00476Q8WZB0 136 aa7.46□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 FAM30AQ9NZY2 134 aa7.46□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 ANK2Q01484 3957 aa7.46□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 OCR1Q9BZK8 76 aa7.45□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 UBE2AP49459 152 aa7.44□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 SPRR4Q96PI1 79 aa7.44□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 C4orf26Q17RF5 130 aa7.43□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 CNBPP62633 177 aaKnown RBP7.42□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 STAB2Q8WWQ8 2551 aa7.42□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 A0A1W2PNN7 141 aa7.42□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 HRCT1Q6UXD1 115 aa7.42□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 A0A087WSZ3 146 aa7.41□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 KRTAP1-5Q9BYS1 174 aa7.41□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 K7EQZ3 153 aa7.41□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 PKIGQ9Y2B9 76 aa7.41□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 SMIM26A0A096LP01 95 aa7.4□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 A0A0G2JQZ4 141 aa7.4□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 IGFL1Q6UW32 110 aa7.4□□□□□ -1.22
CSPG4P3Y-201ENST00000418188 DEFB116Q30KQ4 102 aa7.4□□□□□ -1.23
CSPG4P3Y-201ENST00000418188 CHTF8P0CG12 524 aa7.39□□□□□ -1.23
CSPG4P3Y-201ENST00000418188 A0A0U1RQV1 116 aa7.39□□□□□ -1.23
CSPG4P3Y-201ENST00000418188 HCG22E2RYF7 251 aa7.39□□□□□ -1.23
CSPG4P3Y-201ENST00000418188 DSCR10P59022 87 aa7.39□□□□□ -1.23
CSPG4P3Y-201ENST00000418188 PHF5AQ7RTV0 110 aaKnown RBP7.39□□□□□ -1.23
CSPG4P3Y-201ENST00000418188 EPM2AB3EWF7 344 aa7.38□□□□□ -1.23
CSPG4P3Y-201ENST00000418188 B9D2Q9BPU9 175 aa7.38□□□□□ -1.23
CSPG4P3Y-201ENST00000418188 Q5XG85 94 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms