RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 TRAPPC1Q9Y5R8 145 aa4.2□□□□□ -1.74
HLA-DPA1-241ENST00000417724 NDUFC2O95298 119 aa4.19□□□□□ -1.74
HLA-DPA1-241ENST00000417724 SPRR1BP22528 89 aa4.19□□□□□ -1.74
HLA-DPA1-241ENST00000417724 CD164Q04900 197 aa4.19□□□□□ -1.74
HLA-DPA1-241ENST00000417724 COMMD7Q86VX2 200 aa4.19□□□□□ -1.74
HLA-DPA1-241ENST00000417724 LAMTOR3Q9UHA4 124 aa4.19□□□□□ -1.74
HLA-DPA1-241ENST00000417724 CBY1Q9Y3M2 126 aa4.19□□□□□ -1.74
HLA-DPA1-241ENST00000417724 LCE2BO14633 110 aa4.18□□□□□ -1.74
HLA-DPA1-241ENST00000417724 RPL37P61927 97 aaKnown RBP4.18□□□□□ -1.74
HLA-DPA1-241ENST00000417724 CLLU1Q5K131 121 aa4.18□□□□□ -1.74
HLA-DPA1-241ENST00000417724 CHCHD1Q96BP2 118 aaKnown RBP4.17□□□□□ -1.74
HLA-DPA1-241ENST00000417724 RPS10P5Q9NQ39 176 aa4.17□□□□□ -1.74
HLA-DPA1-241ENST00000417724 DHRS4-AS1Q9P1J3 65 aa4.17□□□□□ -1.74
HLA-DPA1-241ENST00000417724 H7C2G1 150 aa4.16□□□□□ -1.74
HLA-DPA1-241ENST00000417724 LEPROTO15243 131 aa4.16□□□□□ -1.74
HLA-DPA1-241ENST00000417724 RHEBQ15382 184 aa4.16□□□□□ -1.74
HLA-DPA1-241ENST00000417724 Q5XG85 94 aa4.16□□□□□ -1.74
HLA-DPA1-241ENST00000417724 PRO1933Q9H354 126 aa4.16□□□□□ -1.74
HLA-DPA1-241ENST00000417724 J3QQQ9 107 aa4.15□□□□□ -1.75
HLA-DPA1-241ENST00000417724 NMUP48645 174 aa4.15□□□□□ -1.75
HLA-DPA1-241ENST00000417724 TSPEAR-AS2P59090 65 aa4.15□□□□□ -1.75
HLA-DPA1-241ENST00000417724 TAL2Q16559 108 aa4.15□□□□□ -1.75
HLA-DPA1-241ENST00000417724 C1orf195Q5TG92 126 aa4.15□□□□□ -1.75
HLA-DPA1-241ENST00000417724 H0Y8G0 127 aa4.14□□□□□ -1.75
HLA-DPA1-241ENST00000417724 CFC1P0CG37 223 aa4.14□□□□□ -1.75
HLA-DPA1-241ENST00000417724 LGALS3P17931 250 aaKnown RBP4.14□□□□□ -1.75
HLA-DPA1-241ENST00000417724 AKR1D1P51857 326 aa4.14□□□□□ -1.75
HLA-DPA1-241ENST00000417724 PLNP26678 52 aa4.13□□□□□ -1.75
HLA-DPA1-241ENST00000417724 HERVK_113P61574 105 aa4.13□□□□□ -1.75
HLA-DPA1-241ENST00000417724 NPC2P61916 151 aa4.13□□□□□ -1.75
HLA-DPA1-241ENST00000417724 Q1RN00 199 aa4.13□□□□□ -1.75
HLA-DPA1-241ENST00000417724 Q6Q795 121 aa4.13□□□□□ -1.75
HLA-DPA1-241ENST00000417724 SOSTDC1Q6X4U4 206 aa4.13□□□□□ -1.75
HLA-DPA1-241ENST00000417724 DEFB105AQ8NG35 78 aa4.13□□□□□ -1.75
HLA-DPA1-241ENST00000417724 OR13C6PQ8NH95 151 aa4.13□□□□□ -1.75
HLA-DPA1-241ENST00000417724 TEX49A0A1B0GTD5 131 aa4.12□□□□□ -1.75
HLA-DPA1-241ENST00000417724 EIF4EBP3O60516 100 aaPredicted RBP4.12□□□□□ -1.75
HLA-DPA1-241ENST00000417724 HSBP1O75506 76 aa4.12□□□□□ -1.75
HLA-DPA1-241ENST00000417724 C10orf91Q5T1B1 145 aa4.12□□□□□ -1.75
HLA-DPA1-241ENST00000417724 ADAMTSL4-AS1Q5T5F5 129 aa4.12□□□□□ -1.75
HLA-DPA1-241ENST00000417724 SMIM29Q86T20 159 aa4.12□□□□□ -1.75
HLA-DPA1-241ENST00000417724 DPM2O94777 84 aa4.11□□□□□ -1.75
HLA-DPA1-241ENST00000417724 COX7BP24311 80 aa4.11□□□□□ -1.75
HLA-DPA1-241ENST00000417724 FLGP20930 4061 aaPredicted RBP4.11□□□□□ -1.75
HLA-DPA1-241ENST00000417724 A0A0J9YXY3 114 aa4.1□□□□□ -1.75
HLA-DPA1-241ENST00000417724 LEPROTL1O95214 131 aa4.1□□□□□ -1.75
HLA-DPA1-241ENST00000417724 TCL1BO95988 128 aa4.1□□□□□ -1.75
HLA-DPA1-241ENST00000417724 ELOF1P60002 83 aaKnown RBP4.1□□□□□ -1.75
HLA-DPA1-241ENST00000417724 ATP11AUNQ6ZP68 121 aa4.1□□□□□ -1.75
HLA-DPA1-241ENST00000417724 SPANXCQ9NY87 97 aa4.1□□□□□ -1.75
HLA-DPA1-241ENST00000417724 SPANXDQ9BXN6 97 aa4.09□□□□□ -1.75
HLA-DPA1-241ENST00000417724 A0A0G2JQZ4 141 aa4.08□□□□□ -1.76
HLA-DPA1-241ENST00000417724 IGKCP01834 107 aa4.08□□□□□ -1.76
HLA-DPA1-241ENST00000417724 C6orf99Q4VX62 202 aa4.08□□□□□ -1.76
HLA-DPA1-241ENST00000417724 LINC00518Q8N0U6 118 aa4.08□□□□□ -1.76
HLA-DPA1-241ENST00000417724 LINC00308Q8TCZ7 52 aa4.08□□□□□ -1.76
HLA-DPA1-241ENST00000417724 KRTAP9-8Q9BYQ0 159 aa4.08□□□□□ -1.76
HLA-DPA1-241ENST00000417724 TRBV7-6A0A0J9YX20 115 aa4.07□□□□□ -1.76
HLA-DPA1-241ENST00000417724 PMCHL2Q9BQD1 86 aa4.07□□□□□ -1.76
HLA-DPA1-241ENST00000417724 HSPB8Q9UJY1 196 aa4.07□□□□□ -1.76
HLA-DPA1-241ENST00000417724 IGLV5-48A0A075B6I7 105 aa4.06□□□□□ -1.76
HLA-DPA1-241ENST00000417724 C20orf202A1L168 122 aa4.06□□□□□ -1.76
HLA-DPA1-241ENST00000417724 E9PLD3 99 aa4.06□□□□□ -1.76
HLA-DPA1-241ENST00000417724 TIMM17BO60830 172 aa4.06□□□□□ -1.76
HLA-DPA1-241ENST00000417724 PCP2Q8IVA1 136 aa4.06□□□□□ -1.76
HLA-DPA1-241ENST00000417724 SNAPINO95295 136 aa4.05□□□□□ -1.76
HLA-DPA1-241ENST00000417724 APOC3P02656 99 aa4.05□□□□□ -1.76
HLA-DPA1-241ENST00000417724 FABP4P15090 132 aa4.05□□□□□ -1.76
HLA-DPA1-241ENST00000417724 Q75L30 129 aa4.05□□□□□ -1.76
HLA-DPA1-241ENST00000417724 LITAFQ99732 161 aa4.05□□□□□ -1.76
HLA-DPA1-241ENST00000417724 USH2AO75445 5202 aa4.05□□□□□ -1.76
HLA-DPA1-241ENST00000417724 SSPOA2VEC9 5147 aa4.05□□□□□ -1.76
HLA-DPA1-241ENST00000417724 A0A1B0GWB2 263 aa4.04□□□□□ -1.76
HLA-DPA1-241ENST00000417724 SERF1AO75920 110 aa4.04□□□□□ -1.76
HLA-DPA1-241ENST00000417724 NDUFA5Q16718 116 aa4.04□□□□□ -1.76
HLA-DPA1-241ENST00000417724 SVBPQ8N300 66 aa4.04□□□□□ -1.76
HLA-DPA1-241ENST00000417724 OBSCN-AS1Q96MR7 158 aa4.04□□□□□ -1.76
HLA-DPA1-241ENST00000417724 TRBV20-1A0A075B6N2 111 aa4.03□□□□□ -1.76
HLA-DPA1-241ENST00000417724 A4D1N5 150 aa4.03□□□□□ -1.76
HLA-DPA1-241ENST00000417724 YPEL4Q96NS1 127 aa4.03□□□□□ -1.76
HLA-DPA1-241ENST00000417724 FCGBPQ9Y6R7 5405 aaPredicted RBP4.03□□□□□ -1.76
HLA-DPA1-241ENST00000417724 F8WEM9 126 aa4.02□□□□□ -1.77
HLA-DPA1-241ENST00000417724 KRTAP19-1Q8IUB9 90 aa4.02□□□□□ -1.77
HLA-DPA1-241ENST00000417724 NHP2Q9NX24 153 aaKnown RBP4.02□□□□□ -1.77
HLA-DPA1-241ENST00000417724 A6NDN8 102 aa4.01□□□□□ -1.77
HLA-DPA1-241ENST00000417724 TRGC2P03986 189 aa4.01□□□□□ -1.77
HLA-DPA1-241ENST00000417724 LINC00310P59036 64 aa4.01□□□□□ -1.77
HLA-DPA1-241ENST00000417724 ZNF815PA8K554 130 aa4□□□□□ -1.77
HLA-DPA1-241ENST00000417724 Q6JHZ5 121 aa4□□□□□ -1.77
HLA-DPA1-241ENST00000417724 COPS9Q8WXC6 57 aa4□□□□□ -1.77
HLA-DPA1-241ENST00000417724 Q96NJ1 140 aa4□□□□□ -1.77
HLA-DPA1-241ENST00000417724 TRBV7-7A0A0K0K1E9 115 aa3.99□□□□□ -1.77
HLA-DPA1-241ENST00000417724 MT2AP02795 61 aa3.99□□□□□ -1.77
HLA-DPA1-241ENST00000417724 CLEC2BQ92478 149 aa3.98□□□□□ -1.77
HLA-DPA1-241ENST00000417724 LINC00846Q9NV44 126 aa3.98□□□□□ -1.77
HLA-DPA1-241ENST00000417724 TRAV13-2A0A0B4J235 113 aa3.97□□□□□ -1.77
HLA-DPA1-241ENST00000417724 SYS1-DBNDD2H3BUS1 97 aa3.97□□□□□ -1.77
HLA-DPA1-241ENST00000417724 IFITM1P13164 125 aa3.97□□□□□ -1.77
HLA-DPA1-241ENST00000417724 KRTAP10-10P60014 251 aa3.97□□□□□ -1.77
HLA-DPA1-241ENST00000417724 VAMP3Q15836 100 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms