RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 MAP1LC3CQ9BXW4 147 aa8.17□□□□□ -1.1
PAF1-202ENST00000416728 MYMXA0A1B0GTQ4 84 aa8.16□□□□□ -1.1
PAF1-202ENST00000416728 LINC00483Q53H64 154 aa8.16□□□□□ -1.1
PAF1-202ENST00000416728 GAGE2AQ6NT46 116 aa8.15□□□□□ -1.1
PAF1-202ENST00000416728 HSBP1O75506 76 aa8.14□□□□□ -1.11
PAF1-202ENST00000416728 B5MCH6 92 aa8.13□□□□□ -1.11
PAF1-202ENST00000416728 H0Y8G0 127 aa8.13□□□□□ -1.11
PAF1-202ENST00000416728 MOBPQ13875 183 aa8.13□□□□□ -1.11
PAF1-202ENST00000416728 ASB16-AS1Q495Z4 193 aa8.13□□□□□ -1.11
PAF1-202ENST00000416728 FAM19A2Q8N3H0 131 aa8.13□□□□□ -1.11
PAF1-202ENST00000416728 IGLV9-49A0A0B4J1Y8 123 aa8.12□□□□□ -1.11
PAF1-202ENST00000416728 TRGC2P03986 189 aa8.12□□□□□ -1.11
PAF1-202ENST00000416728 LOC107984156A0A0G2JMH3 177 aa8.1□□□□□ -1.11
PAF1-202ENST00000416728 TRBV10-2A0A0K0K1G8 114 aa8.1□□□□□ -1.11
PAF1-202ENST00000416728 TMEM238LA0A1B0GVL6 79 aa8.1□□□□□ -1.11
PAF1-202ENST00000416728 ERC2-IT1O76042 136 aa8.1□□□□□ -1.11
PAF1-202ENST00000416728 TSPEAR-AS2P59090 65 aa8.1□□□□□ -1.11
PAF1-202ENST00000416728 RPS29P62273 56 aaKnown RBP8.1□□□□□ -1.11
PAF1-202ENST00000416728 SSBP3-AS1Q7Z2R9 100 aa8.1□□□□□ -1.11
PAF1-202ENST00000416728 ARL17AQ8IVW1 177 aa8.1□□□□□ -1.11
PAF1-202ENST00000416728 LEPROTO15243 131 aa8.1□□□□□ -1.11
PAF1-202ENST00000416728 SEC61BP60468 96 aaKnown RBP8.1□□□□□ -1.11
PAF1-202ENST00000416728 Q6ZRX8 168 aa8.1□□□□□ -1.11
PAF1-202ENST00000416728 MIEN1Q9BRT3 115 aa8.1□□□□□ -1.11
PAF1-202ENST00000416728 KRTAP9-6A0A140TA67 174 aa8.09□□□□□ -1.12
PAF1-202ENST00000416728 Q8N377 158 aa8.09□□□□□ -1.12
PAF1-202ENST00000416728 Q9BRP9 147 aa8.09□□□□□ -1.12
PAF1-202ENST00000416728 SPANXB1Q9NS25 103 aaPredicted RBP8.09□□□□□ -1.12
PAF1-202ENST00000416728 J3QQQ9 107 aa8.08□□□□□ -1.12
PAF1-202ENST00000416728 LEPROTL1O95214 131 aa8.08□□□□□ -1.12
PAF1-202ENST00000416728 PLNP26678 52 aa8.08□□□□□ -1.12
PAF1-202ENST00000416728 SLC25A20O43772 301 aa8.07□□□□□ -1.12
PAF1-202ENST00000416728 LINC01547P58512 204 aaPredicted RBP8.07□□□□□ -1.12
PAF1-202ENST00000416728 HERVK_113P61574 105 aa8.07□□□□□ -1.12
PAF1-202ENST00000416728 COL5A1-AS1Q5SY13 56 aa8.07□□□□□ -1.12
PAF1-202ENST00000416728 S100A7L2Q5SY68 101 aa8.07□□□□□ -1.12
PAF1-202ENST00000416728 NMUP48645 174 aa8.06□□□□□ -1.12
PAF1-202ENST00000416728 HSBP1L1C9JCN9 74 aa8.05□□□□□ -1.12
PAF1-202ENST00000416728 NDUFC2O95298 119 aa8.05□□□□□ -1.12
PAF1-202ENST00000416728 IGLV6-57P01721 117 aa8.05□□□□□ -1.12
PAF1-202ENST00000416728 LGALS3P17931 250 aaKnown RBP8.05□□□□□ -1.12
PAF1-202ENST00000416728 KRTAP4-1Q9BYQ7 146 aa8.05□□□□□ -1.12
PAF1-202ENST00000416728 TRAV23DV6A0A075B6W5 121 aa8.04□□□□□ -1.12
PAF1-202ENST00000416728 SERF1AO75920 110 aa8.04□□□□□ -1.12
PAF1-202ENST00000416728 DPM2O94777 84 aa8.04□□□□□ -1.12
PAF1-202ENST00000416728 C9orf153Q5TBE3 101 aa8.04□□□□□ -1.12
PAF1-202ENST00000416728 PMCHL2Q9BQD1 86 aa8.03□□□□□ -1.12
PAF1-202ENST00000416728 HSPB8Q9UJY1 196 aa8.03□□□□□ -1.12
PAF1-202ENST00000416728 IGKCP01834 107 aa8.02□□□□□ -1.13
PAF1-202ENST00000416728 LINC00310P59036 64 aa8.02□□□□□ -1.13
PAF1-202ENST00000416728 KRTAP3-3Q9BYR6 98 aa8.02□□□□□ -1.13
PAF1-202ENST00000416728 KRTAP3-2Q9BYR7 98 aa8.02□□□□□ -1.13
PAF1-202ENST00000416728 C20orf202A1L168 122 aa8.01□□□□□ -1.13
PAF1-202ENST00000416728 ZNF73O43830 326 aaPredicted RBP8.01□□□□□ -1.13
PAF1-202ENST00000416728 NPC2P61916 151 aa8□□□□□ -1.13
PAF1-202ENST00000416728 XP32Q5T750 250 aa8□□□□□ -1.13
PAF1-202ENST00000416728 SOSTDC1Q6X4U4 206 aa8□□□□□ -1.13
PAF1-202ENST00000416728 SCGB1D1O95968 90 aa7.99□□□□□ -1.13
PAF1-202ENST00000416728 HINT1P49773 126 aaPredicted RBP7.99□□□□□ -1.13
PAF1-202ENST00000416728 ST20-AS1Q8NBB2 130 aa7.99□□□□□ -1.13
PAF1-202ENST00000416728 A0A0J9YXY3 114 aa7.98□□□□□ -1.13
PAF1-202ENST00000416728 EIF4EBP3O60516 100 aaPredicted RBP7.98□□□□□ -1.13
PAF1-202ENST00000416728 UBE2V1Q13404 147 aa7.97□□□□□ -1.13
PAF1-202ENST00000416728 ADAMTSL4-AS1Q5T5F5 129 aa7.97□□□□□ -1.13
PAF1-202ENST00000416728 VAMP8Q9BV40 100 aa7.97□□□□□ -1.13
PAF1-202ENST00000416728 E9PLD3 99 aa7.96□□□□□ -1.14
PAF1-202ENST00000416728 UQCR10Q9UDW1 63 aa7.95□□□□□ -1.14
PAF1-202ENST00000416728 SLC25A34Q6PIV7 304 aa7.94□□□□□ -1.14
PAF1-202ENST00000416728 PET117Q6UWS5 81 aa7.94□□□□□ -1.14
PAF1-202ENST00000416728 OR13C6PQ8NH95 151 aa7.94□□□□□ -1.14
PAF1-202ENST00000416728 LIMD2Q9BT23 127 aa7.94□□□□□ -1.14
PAF1-202ENST00000416728 SPANXCQ9NY87 97 aa7.94□□□□□ -1.14
PAF1-202ENST00000416728 SPRR1BP22528 89 aa7.93□□□□□ -1.14
PAF1-202ENST00000416728 DHRS4-AS1Q9P1J3 65 aa7.93□□□□□ -1.14
PAF1-202ENST00000416728 HRCT1Q6UXD1 115 aa7.92□□□□□ -1.14
PAF1-202ENST00000416728 LINC00308Q8TCZ7 52 aa7.92□□□□□ -1.14
PAF1-202ENST00000416728 LITAFQ99732 161 aa7.91□□□□□ -1.14
PAF1-202ENST00000416728 LAMTOR3Q9UHA4 124 aa7.91□□□□□ -1.14
PAF1-202ENST00000416728 TIMM17BO60830 172 aa7.89□□□□□ -1.15
PAF1-202ENST00000416728 SPANXDQ9BXN6 97 aa7.89□□□□□ -1.15
PAF1-202ENST00000416728 SYS1-DBNDD2H3BUS1 97 aa7.88□□□□□ -1.15
PAF1-202ENST00000416728 K7ERU9 68 aa7.88□□□□□ -1.15
PAF1-202ENST00000416728 BATFQ16520 125 aa7.88□□□□□ -1.15
PAF1-202ENST00000416728 VPS25Q9BRG1 176 aa7.88□□□□□ -1.15
PAF1-202ENST00000416728 C9orf92A6NGG3 77 aa7.87□□□□□ -1.15
PAF1-202ENST00000416728 PCOTHQ58A44 107 aa7.87□□□□□ -1.15
PAF1-202ENST00000416728 LCE2CQ5TA81 110 aa7.87□□□□□ -1.15
PAF1-202ENST00000416728 PAM16Q9Y3D7 125 aa7.87□□□□□ -1.15
PAF1-202ENST00000416728 IGLV8-61A0A075B6I0 122 aa7.86□□□□□ -1.15
PAF1-202ENST00000416728 ZNF815PA8K554 130 aa7.86□□□□□ -1.15
PAF1-202ENST00000416728 COX7BP24311 80 aa7.86□□□□□ -1.15
PAF1-202ENST00000416728 ELOF1P60002 83 aaKnown RBP7.86□□□□□ -1.15
PAF1-202ENST00000416728 C6orf99Q4VX62 202 aa7.86□□□□□ -1.15
PAF1-202ENST00000416728 OCIAD2Q56VL3 154 aa7.86□□□□□ -1.15
PAF1-202ENST00000416728 SCGB1A1P11684 91 aa7.85□□□□□ -1.15
PAF1-202ENST00000416728 TAL2Q16559 108 aa7.85□□□□□ -1.15
PAF1-202ENST00000416728 Q1RN00 199 aa7.85□□□□□ -1.15
PAF1-202ENST00000416728 SPATA45Q537H7 98 aa7.85□□□□□ -1.15
PAF1-202ENST00000416728 CD164Q04900 197 aa7.84□□□□□ -1.15
PAF1-202ENST00000416728 LINC01545Q5VT33 79 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms