RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 TPRXLQ17RH7 258 aa5.41□□□□□ -1.54
LINC01238-201ENST00000416204 LINC00304Q8N9R0 145 aa5.41□□□□□ -1.54
LINC01238-201ENST00000416204 KRTAP4-1Q9BYQ7 146 aa5.41□□□□□ -1.54
LINC01238-201ENST00000416204 XAGE1AQ9HD64 81 aa5.41□□□□□ -1.54
LINC01238-201ENST00000416204 C22orf24Q9Y442 160 aa5.41□□□□□ -1.54
LINC01238-201ENST00000416204 NDUFC2-KCTD14E9PQ53 114 aa5.4□□□□□ -1.54
LINC01238-201ENST00000416204 K7EP34 96 aa5.4□□□□□ -1.54
LINC01238-201ENST00000416204 RPL24P83731 157 aaKnown RBP5.4□□□□□ -1.54
LINC01238-201ENST00000416204 KIAA0087Q14695 138 aa5.4□□□□□ -1.54
LINC01238-201ENST00000416204 RAB37Q96AX2 223 aa5.4□□□□□ -1.54
LINC01238-201ENST00000416204 NDUFA12Q9UI09 145 aa5.4□□□□□ -1.54
LINC01238-201ENST00000416204 IGLV5-39A0A0G2JS06 123 aa5.39□□□□□ -1.55
LINC01238-201ENST00000416204 A0A0J9YXY3 114 aa5.39□□□□□ -1.55
LINC01238-201ENST00000416204 RPL37AP8A6NKH3 93 aa5.39□□□□□ -1.55
LINC01238-201ENST00000416204 RPL28P46779 137 aaKnown RBP5.39□□□□□ -1.55
LINC01238-201ENST00000416204 LYRM7Q5U5X0 104 aa5.39□□□□□ -1.55
LINC01238-201ENST00000416204 SPANXDQ9BXN6 97 aa5.39□□□□□ -1.55
LINC01238-201ENST00000416204 PPDPFQ9H3Y8 114 aa5.39□□□□□ -1.55
LINC01238-201ENST00000416204 SPANXCQ9NY87 97 aa5.39□□□□□ -1.55
LINC01238-201ENST00000416204 F8WDY8 70 aa5.38□□□□□ -1.55
LINC01238-201ENST00000416204 BCE1O60756 84 aa5.38□□□□□ -1.55
LINC01238-201ENST00000416204 IFITM1P13164 125 aa5.38□□□□□ -1.55
LINC01238-201ENST00000416204 COPS9Q8WXC6 57 aa5.38□□□□□ -1.55
LINC01238-201ENST00000416204 CDKN2A-AS1Q9UH64 79 aa5.38□□□□□ -1.55
LINC01238-201ENST00000416204 SPCS1Q9Y6A9 102 aa5.38□□□□□ -1.55
LINC01238-201ENST00000416204 A0A0B4J2C4 111 aa5.37□□□□□ -1.55
LINC01238-201ENST00000416204 TRBV30A0A0K0K1B3 111 aa5.37□□□□□ -1.55
LINC01238-201ENST00000416204 SPINK8P0C7L1 97 aa5.37□□□□□ -1.55
LINC01238-201ENST00000416204 HERV-K104P63124 156 aa5.37□□□□□ -1.55
LINC01238-201ENST00000416204 K7ERJ3 54 aa5.36□□□□□ -1.55
LINC01238-201ENST00000416204 LCE2BO14633 110 aa5.36□□□□□ -1.55
LINC01238-201ENST00000416204 SFTA2Q6UW10 78 aa5.36□□□□□ -1.55
LINC01238-201ENST00000416204 LINC01561Q8N1V8 128 aa5.36□□□□□ -1.55
LINC01238-201ENST00000416204 TOMM7Q9P0U1 55 aa5.36□□□□□ -1.55
LINC01238-201ENST00000416204 SMIM1B2RUZ4 78 aa5.35□□□□□ -1.55
LINC01238-201ENST00000416204 CFC1BP0CG36 223 aa5.35□□□□□ -1.55
LINC01238-201ENST00000416204 CFC1P0CG37 223 aa5.35□□□□□ -1.55
LINC01238-201ENST00000416204 MRPL55Q7Z7F7 128 aaKnown RBP5.35□□□□□ -1.55
LINC01238-201ENST00000416204 MUSTN1Q8IVN3 82 aa5.35□□□□□ -1.55
LINC01238-201ENST00000416204 LITAFQ99732 161 aa5.35□□□□□ -1.55
LINC01238-201ENST00000416204 PRO1854Q9UHT4 67 aa5.35□□□□□ -1.55
LINC01238-201ENST00000416204 A4D1N5 150 aa5.34□□□□□ -1.55
LINC01238-201ENST00000416204 F8W1H4 67 aa5.34□□□□□ -1.55
LINC01238-201ENST00000416204 UBE2AP49459 152 aa5.34□□□□□ -1.55
LINC01238-201ENST00000416204 C3orf22Q8N5N4 141 aa5.34□□□□□ -1.55
LINC01238-201ENST00000416204 LINC00337Q8N6G1 96 aa5.34□□□□□ -1.55
LINC01238-201ENST00000416204 LINC00167Q96N53 147 aa5.34□□□□□ -1.55
LINC01238-201ENST00000416204 NAA38Q9BRA0 125 aaKnown RBP5.34□□□□□ -1.55
LINC01238-201ENST00000416204 TRBV20-1A0A075B6N2 111 aa5.33□□□□□ -1.56
LINC01238-201ENST00000416204 CKS1BP61024 79 aa5.33□□□□□ -1.56
LINC01238-201ENST00000416204 ZNF625Q96I27 306 aaPredicted RBP5.33□□□□□ -1.56
LINC01238-201ENST00000416204 PRSS2P07478 247 aa5.32□□□□□ -1.56
LINC01238-201ENST00000416204 PRLHP81277 87 aa5.32□□□□□ -1.56
LINC01238-201ENST00000416204 COX7B2Q8TF08 81 aa5.32□□□□□ -1.56
LINC01238-201ENST00000416204 ERG28Q9UKR5 140 aa5.32□□□□□ -1.56
LINC01238-201ENST00000416204 ASB16-AS1Q495Z4 193 aa5.31□□□□□ -1.56
LINC01238-201ENST00000416204 FAM229BQ4G0N7 80 aa5.31□□□□□ -1.56
LINC01238-201ENST00000416204 C6orf226Q5I0X4 101 aa5.31□□□□□ -1.56
LINC01238-201ENST00000416204 ADAMTSL4-AS1Q5T5F5 129 aa5.31□□□□□ -1.56
LINC01238-201ENST00000416204 KRTAP13-1Q8IUC0 172 aa5.31□□□□□ -1.56
LINC01238-201ENST00000416204 IGKV2-28A0A075B6P5 120 aa5.3□□□□□ -1.56
LINC01238-201ENST00000416204 K7ERU9 68 aa5.3□□□□□ -1.56
LINC01238-201ENST00000416204 IGKV2D-28P01615 120 aa5.3□□□□□ -1.56
LINC01238-201ENST00000416204 KRTAP13-3Q3SY46 172 aa5.3□□□□□ -1.56
LINC01238-201ENST00000416204 OCIAD2Q56VL3 154 aa5.3□□□□□ -1.56
LINC01238-201ENST00000416204 LOC107984156A0A0G2JMH3 177 aa5.29□□□□□ -1.56
LINC01238-201ENST00000416204 COX6CP09669 75 aa5.29□□□□□ -1.56
LINC01238-201ENST00000416204 SCGB1C2P0DMR2 95 aa5.29□□□□□ -1.56
LINC01238-201ENST00000416204 MEIG1Q5JSS6 88 aa5.29□□□□□ -1.56
LINC01238-201ENST00000416204 LCE2CQ5TA81 110 aa5.29□□□□□ -1.56
LINC01238-201ENST00000416204 ARL17AQ8IVW1 177 aa5.29□□□□□ -1.56
LINC01238-201ENST00000416204 LINC00308Q8TCZ7 52 aa5.29□□□□□ -1.56
LINC01238-201ENST00000416204 H3BMG7 143 aa5.28□□□□□ -1.56
LINC01238-201ENST00000416204 CXCL5P42830 114 aa5.28□□□□□ -1.56
LINC01238-201ENST00000416204 PSMB2P49721 201 aa5.28□□□□□ -1.56
LINC01238-201ENST00000416204 Q8IZM0 81 aa5.28□□□□□ -1.56
LINC01238-201ENST00000416204 J3QR89 54 aa5.27□□□□□ -1.57
LINC01238-201ENST00000416204 EIF4EBP3O60516 100 aaPredicted RBP5.27□□□□□ -1.57
LINC01238-201ENST00000416204 ATXN8Q156A1 80 aa5.27□□□□□ -1.57
LINC01238-201ENST00000416204 Q1RN00 199 aa5.27□□□□□ -1.57
LINC01238-201ENST00000416204 FAM19A1Q7Z5A9 133 aa5.27□□□□□ -1.57
LINC01238-201ENST00000416204 DAND5Q8N907 189 aa5.27□□□□□ -1.57
LINC01238-201ENST00000416204 PRO0461Q9UI25 63 aa5.27□□□□□ -1.57
LINC01238-201ENST00000416204 SEC61BP60468 96 aaKnown RBP5.26□□□□□ -1.57
LINC01238-201ENST00000416204 NKAPP1Q8N9T2 125 aa5.26□□□□□ -1.57
LINC01238-201ENST00000416204 CBY1Q9Y3M2 126 aa5.26□□□□□ -1.57
LINC01238-201ENST00000416204 TRAV13-2A0A0B4J235 113 aa5.25□□□□□ -1.57
LINC01238-201ENST00000416204 TCL1BO95988 128 aa5.25□□□□□ -1.57
LINC01238-201ENST00000416204 SMCPP49901 116 aaPredicted RBP5.25□□□□□ -1.57
LINC01238-201ENST00000416204 MT1HP80294 61 aa5.25□□□□□ -1.57
LINC01238-201ENST00000416204 COX17Q14061 63 aa5.25□□□□□ -1.57
LINC01238-201ENST00000416204 FP248Q71RG6 208 aaPredicted RBP5.25□□□□□ -1.57
LINC01238-201ENST00000416204 TRIAP1O43715 76 aa5.24□□□□□ -1.57
LINC01238-201ENST00000416204 LINC00158P58513 81 aa5.24□□□□□ -1.57
LINC01238-201ENST00000416204 SOSTDC1Q6X4U4 206 aa5.24□□□□□ -1.57
LINC01238-201ENST00000416204 H7C2G1 150 aa5.23□□□□□ -1.57
LINC01238-201ENST00000416204 NPC2P61916 151 aa5.23□□□□□ -1.57
LINC01238-201ENST00000416204 KRTAP19-2Q3LHN2 52 aa5.23□□□□□ -1.57
LINC01238-201ENST00000416204 MIR7-3HGQ8N6C7 128 aa5.23□□□□□ -1.57
LINC01238-201ENST00000416204 Q8NBF4 154 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms