RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 REG3GQ6UW15 175 aa8.84□□□□□ -0.99
SF3B1-204ENST00000414963 Q1RN00 199 aa8.83□□□□□ -1
SF3B1-204ENST00000414963 APOBP04114 4563 aaKnown RBP8.83□□□□□ -1
SF3B1-204ENST00000414963 C9orf118A6NHY6 69 aa8.82□□□□□ -1
SF3B1-204ENST00000414963 C6orf99Q4VX62 202 aa8.82□□□□□ -1
SF3B1-204ENST00000414963 DIRC1Q969H9 104 aa8.82□□□□□ -1
SF3B1-204ENST00000414963 PSORS1C2Q9UIG4 136 aa8.81□□□□□ -1
SF3B1-204ENST00000414963 TRIAP1O43715 76 aa8.8□□□□□ -1
SF3B1-204ENST00000414963 VAMP3Q15836 100 aa8.8□□□□□ -1
SF3B1-204ENST00000414963 H0Y9J4 135 aa8.79□□□□□ -1
SF3B1-204ENST00000414963 H0YGX0 51 aa8.79□□□□□ -1
SF3B1-204ENST00000414963 BCE1O60756 84 aa8.79□□□□□ -1
SF3B1-204ENST00000414963 PSMB2P49721 201 aa8.79□□□□□ -1
SF3B1-204ENST00000414963 EPPK1P58107 5090 aaKnown RBP8.78□□□□□ -1
SF3B1-204ENST00000414963 ETDCA0A1B0GVM5 59 aa8.78□□□□□ -1
SF3B1-204ENST00000414963 B5MCH6 92 aa8.78□□□□□ -1
SF3B1-204ENST00000414963 COX6CP09669 75 aa8.78□□□□□ -1
SF3B1-204ENST00000414963 ELOF1P60002 83 aaKnown RBP8.78□□□□□ -1
SF3B1-204ENST00000414963 H3BUT2 72 aa8.77□□□□□ -1.01
SF3B1-204ENST00000414963 COX7BP24311 80 aa8.77□□□□□ -1.01
SF3B1-204ENST00000414963 LINC00528Q8N1L1 170 aa8.77□□□□□ -1.01
SF3B1-204ENST00000414963 INAFM2P0DMQ5 153 aa8.76□□□□□ -1.01
SF3B1-204ENST00000414963 C1orf137Q5JT78 98 aa8.76□□□□□ -1.01
SF3B1-204ENST00000414963 Q6ZRX8 168 aa8.76□□□□□ -1.01
SF3B1-204ENST00000414963 KRTAP13-1Q8IUC0 172 aa8.76□□□□□ -1.01
SF3B1-204ENST00000414963 NAA38Q9BRA0 125 aaKnown RBP8.76□□□□□ -1.01
SF3B1-204ENST00000414963 A0A1W2PPM0 123 aa8.75□□□□□ -1.01
SF3B1-204ENST00000414963 SMR3BP02814 79 aaPredicted RBP8.74□□□□□ -1.01
SF3B1-204ENST00000414963 SCGB1C2P0DMR2 95 aa8.74□□□□□ -1.01
SF3B1-204ENST00000414963 LYRM7Q5U5X0 104 aa8.74□□□□□ -1.01
SF3B1-204ENST00000414963 LINC00575Q6W349 94 aa8.74□□□□□ -1.01
SF3B1-204ENST00000414963 FAM19A1Q7Z5A9 133 aa8.74□□□□□ -1.01
SF3B1-204ENST00000414963 IGLV7-43P04211 117 aa8.73□□□□□ -1.01
SF3B1-204ENST00000414963 A0A1B0GX51 115 aa8.72□□□□□ -1.01
SF3B1-204ENST00000414963 FABP2P12104 132 aa8.72□□□□□ -1.01
SF3B1-204ENST00000414963 UBE2AP49459 152 aa8.72□□□□□ -1.01
SF3B1-204ENST00000414963 RPL37AP61513 92 aaKnown RBP8.72□□□□□ -1.01
SF3B1-204ENST00000414963 Q9BRP9 147 aa8.72□□□□□ -1.01
SF3B1-204ENST00000414963 DHRS4-AS1Q9P1J3 65 aa8.72□□□□□ -1.01
SF3B1-204ENST00000414963 ZNF861PO60384 105 aa8.71□□□□□ -1.02
SF3B1-204ENST00000414963 PRLHP81277 87 aa8.71□□□□□ -1.02
SF3B1-204ENST00000414963 FAM218AQ96MZ4 157 aa8.71□□□□□ -1.02
SF3B1-204ENST00000414963 TRBV20-1A0A075B6N2 111 aa8.7□□□□□ -1.02
SF3B1-204ENST00000414963 KRTAP10-4P60372 401 aaPredicted RBP8.7□□□□□ -1.02
SF3B1-204ENST00000414963 SMCR5Q8TEV8 140 aa8.7□□□□□ -1.02
SF3B1-204ENST00000414963 CLEC2BQ92478 149 aa8.7□□□□□ -1.02
SF3B1-204ENST00000414963 HSPG2P98160 4391 aa8.7□□□□□ -1.02
SF3B1-204ENST00000414963 hADV29S1A0JD25 119 aa8.69□□□□□ -1.02
SF3B1-204ENST00000414963 FAM229AH3BQW9 127 aa8.69□□□□□ -1.02
SF3B1-204ENST00000414963 LST1O00453 97 aa8.69□□□□□ -1.02
SF3B1-204ENST00000414963 SLC25A20O43772 301 aa8.69□□□□□ -1.02
SF3B1-204ENST00000414963 RYR1P21817 5038 aa8.68□□□□□ -1.02
SF3B1-204ENST00000414963 SNCGO76070 127 aa8.68□□□□□ -1.02
SF3B1-204ENST00000414963 TCL1BO95988 128 aa8.68□□□□□ -1.02
SF3B1-204ENST00000414963 TRACP01848 142 aa8.67□□□□□ -1.02
SF3B1-204ENST00000414963 PLA2G1BP04054 148 aaKnown RBP8.67□□□□□ -1.02
SF3B1-204ENST00000414963 ATXN8Q156A1 80 aa8.67□□□□□ -1.02
SF3B1-204ENST00000414963 VPS13BQ7Z7G8 4022 aa8.66□□□□□ -1.02
SF3B1-204ENST00000414963 ERC2-IT1O76042 136 aa8.66□□□□□ -1.02
SF3B1-204ENST00000414963 HIGD2AQ9BW72 106 aa8.66□□□□□ -1.02
SF3B1-204ENST00000414963 FAT1Q14517 4588 aa8.66□□□□□ -1.02
SF3B1-204ENST00000414963 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.65□□□□□ -1.02
SF3B1-204ENST00000414963 Q8N1X5 172 aa8.65□□□□□ -1.02
SF3B1-204ENST00000414963 SPCS1Q9Y6A9 102 aa8.65□□□□□ -1.02
SF3B1-204ENST00000414963 KIAA1109Q2LD37 5005 aa8.65□□□□□ -1.02
SF3B1-204ENST00000414963 SRRM2Q9UQ35 2752 aaKnown RBP8.63□□□□□ -1.03
SF3B1-204ENST00000414963 K7EP34 96 aa8.63□□□□□ -1.03
SF3B1-204ENST00000414963 SPINK6Q6UWN8 80 aa8.63□□□□□ -1.03
SF3B1-204ENST00000414963 KRTAP17-1Q9BYP8 105 aa8.63□□□□□ -1.03
SF3B1-204ENST00000414963 Q5VSD8 79 aa8.62□□□□□ -1.03
SF3B1-204ENST00000414963 BIRC6Q9NR09 4857 aa8.62□□□□□ -1.03
SF3B1-204ENST00000414963 IGLV5-48A0A075B6I7 105 aa8.61□□□□□ -1.03
SF3B1-204ENST00000414963 DNAL4O96015 105 aa8.61□□□□□ -1.03
SF3B1-204ENST00000414963 OCIAD2Q56VL3 154 aa8.61□□□□□ -1.03
SF3B1-204ENST00000414963 Q6ZQY7 126 aa8.61□□□□□ -1.03
SF3B1-204ENST00000414963 H3BMG7 143 aa8.6□□□□□ -1.03
SF3B1-204ENST00000414963 GTF2H5Q6ZYL4 71 aa8.6□□□□□ -1.03
SF3B1-204ENST00000414963 ST20-AS1Q8NBB2 130 aa8.6□□□□□ -1.03
SF3B1-204ENST00000414963 ZNF706Q9Y5V0 76 aaPredicted RBP8.6□□□□□ -1.03
SF3B1-204ENST00000414963 A0A1B0GV90 55 aa8.59□□□□□ -1.03
SF3B1-204ENST00000414963 H3BQ85 93 aa8.59□□□□□ -1.03
SF3B1-204ENST00000414963 GHRHP01286 108 aa8.59□□□□□ -1.03
SF3B1-204ENST00000414963 LINC01547P58512 204 aaPredicted RBP8.59□□□□□ -1.03
SF3B1-204ENST00000414963 PPDPFLQ8WWR9 84 aa8.59□□□□□ -1.03
SF3B1-204ENST00000414963 SPRR4Q96PI1 79 aa8.59□□□□□ -1.03
SF3B1-204ENST00000414963 SPRR1BP22528 89 aa8.58□□□□□ -1.04
SF3B1-204ENST00000414963 ORMDL1Q9P0S3 153 aa8.58□□□□□ -1.04
SF3B1-204ENST00000414963 TEX49A0A1B0GTD5 131 aa8.57□□□□□ -1.04
SF3B1-204ENST00000414963 LINC00483Q53H64 154 aa8.57□□□□□ -1.04
SF3B1-204ENST00000414963 C9JAW5 83 aa8.56□□□□□ -1.04
SF3B1-204ENST00000414963 Q8N377 158 aa8.56□□□□□ -1.04
SF3B1-204ENST00000414963 TMEM256-PLSCR3K7ERE1 68 aa8.55□□□□□ -1.04
SF3B1-204ENST00000414963 BAALC-AS2P0C853 105 aa8.55□□□□□ -1.04
SF3B1-204ENST00000414963 LINC01600Q96MT4 127 aa8.55□□□□□ -1.04
SF3B1-204ENST00000414963 UBE2V1Q13404 147 aa8.54□□□□□ -1.04
SF3B1-204ENST00000414963 GAGE2AQ6NT46 116 aa8.54□□□□□ -1.04
SF3B1-204ENST00000414963 DEFB105AQ8NG35 78 aa8.54□□□□□ -1.04
SF3B1-204ENST00000414963 PRO0461Q9UI25 63 aa8.53□□□□□ -1.04
SF3B1-204ENST00000414963 H3BT86 120 aa8.52□□□□□ -1.05
SF3B1-204ENST00000414963 KRTAP1-4P0C5Y4 121 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms