RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 KCNQ1DNQ9H478 68 aa10.24□□□□□ -0.77
TSPAN4-208ENST00000409531 DMBT1Q9UGM3 2413 aaPredicted RBP10.24□□□□□ -0.77
TSPAN4-208ENST00000409531 FLG2Q5D862 2391 aaPredicted RBP10.23□□□□□ -0.77
TSPAN4-208ENST00000409531 RPL37AP61513 92 aaKnown RBP10.23□□□□□ -0.77
TSPAN4-208ENST00000409531 BVES-AS1Q5T3Y7 98 aa10.23□□□□□ -0.77
TSPAN4-208ENST00000409531 PSORS1C2Q9UIG4 136 aa10.23□□□□□ -0.77
TSPAN4-208ENST00000409531 TRAV23DV6A0A075B6W5 121 aa10.22□□□□□ -0.77
TSPAN4-208ENST00000409531 HINT1P49773 126 aaPredicted RBP10.22□□□□□ -0.77
TSPAN4-208ENST00000409531 REG3GQ6UW15 175 aa10.22□□□□□ -0.77
TSPAN4-208ENST00000409531 NHP2Q9NX24 153 aaKnown RBP10.22□□□□□ -0.77
TSPAN4-208ENST00000409531 KRTAP11-1Q8IUC1 163 aa10.21□□□□□ -0.78
TSPAN4-208ENST00000409531 RPL13AP40429 203 aaKnown RBP10.2□□□□□ -0.78
TSPAN4-208ENST00000409531 PRO1854Q9UHT4 67 aa10.2□□□□□ -0.78
TSPAN4-208ENST00000409531 C1orf137Q5JT78 98 aa10.19□□□□□ -0.78
TSPAN4-208ENST00000409531 A0A1B0GWB2 263 aa10.18□□□□□ -0.78
TSPAN4-208ENST00000409531 ZNF73O43830 326 aaPredicted RBP10.18□□□□□ -0.78
TSPAN4-208ENST00000409531 BCE1O60756 84 aa10.18□□□□□ -0.78
TSPAN4-208ENST00000409531 SPRR1AP35321 89 aa10.17□□□□□ -0.78
TSPAN4-208ENST00000409531 ETDCA0A1B0GVM5 59 aa10.16□□□□□ -0.78
TSPAN4-208ENST00000409531 DIRC1Q969H9 104 aa10.16□□□□□ -0.78
TSPAN4-208ENST00000409531 FAM19A1Q7Z5A9 133 aa10.15□□□□□ -0.78
TSPAN4-208ENST00000409531 SMIM11BQ8TCY0 68 aa10.15□□□□□ -0.78
TSPAN4-208ENST00000409531 PCP4L1A6NKN8 68 aa10.14□□□□□ -0.79
TSPAN4-208ENST00000409531 UBE2AP49459 152 aa10.14□□□□□ -0.79
TSPAN4-208ENST00000409531 Q1RN00 199 aa10.14□□□□□ -0.79
TSPAN4-208ENST00000409531 H7C2G1 150 aa10.13□□□□□ -0.79
TSPAN4-208ENST00000409531 IGLV7-43P04211 117 aa10.13□□□□□ -0.79
TSPAN4-208ENST00000409531 BATFQ16520 125 aa10.13□□□□□ -0.79
TSPAN4-208ENST00000409531 C6orf99Q4VX62 202 aa10.13□□□□□ -0.79
TSPAN4-208ENST00000409531 TRBV7-6A0A0J9YX20 115 aa10.12□□□□□ -0.79
TSPAN4-208ENST00000409531 KRTAP4-16G5E9R7 235 aaPredicted RBP10.12□□□□□ -0.79
TSPAN4-208ENST00000409531 H0Y9J4 135 aa10.12□□□□□ -0.79
TSPAN4-208ENST00000409531 K7ERJ3 54 aa10.12□□□□□ -0.79
TSPAN4-208ENST00000409531 RPL28P46779 137 aaKnown RBP10.12□□□□□ -0.79
TSPAN4-208ENST00000409531 VAMP3Q15836 100 aa10.12□□□□□ -0.79
TSPAN4-208ENST00000409531 UBR4Q5T4S7 5183 aa10.11□□□□□ -0.79
TSPAN4-208ENST00000409531 MYCBP2O75592 4640 aa10.11□□□□□ -0.79
TSPAN4-208ENST00000409531 ZNF861PO60384 105 aa10.1□□□□□ -0.79
TSPAN4-208ENST00000409531 Q6ZRX8 168 aa10.1□□□□□ -0.79
TSPAN4-208ENST00000409531 KRTAP29-1A8MX34 341 aaPredicted RBP10.09□□□□□ -0.79
TSPAN4-208ENST00000409531 B5MCH6 92 aa10.09□□□□□ -0.79
TSPAN4-208ENST00000409531 COX7BP24311 80 aa10.09□□□□□ -0.79
TSPAN4-208ENST00000409531 ELOF1P60002 83 aaKnown RBP10.08□□□□□ -0.8
TSPAN4-208ENST00000409531 PRLHP81277 87 aa10.08□□□□□ -0.8
TSPAN4-208ENST00000409531 KRTAP13-1Q8IUC0 172 aa10.07□□□□□ -0.8
TSPAN4-208ENST00000409531 J3QL48 77 aa10.07□□□□□ -0.8
TSPAN4-208ENST00000409531 TSPAN13O95857 204 aa10.07□□□□□ -0.8
TSPAN4-208ENST00000409531 OXTP01178 125 aa10.07□□□□□ -0.8
TSPAN4-208ENST00000409531 PSMB2P49721 201 aa10.07□□□□□ -0.8
TSPAN4-208ENST00000409531 SPINK6Q6UWN8 80 aa10.07□□□□□ -0.8
TSPAN4-208ENST00000409531 SNHG12Q9BXW3 62 aa10.07□□□□□ -0.8
TSPAN4-208ENST00000409531 COX6CP09669 75 aa10.06□□□□□ -0.8
TSPAN4-208ENST00000409531 DHRS4-AS1Q9P1J3 65 aa10.06□□□□□ -0.8
TSPAN4-208ENST00000409531 H0YGX0 51 aa10.05□□□□□ -0.8
TSPAN4-208ENST00000409531 HIGD2AQ9BW72 106 aa10.05□□□□□ -0.8
TSPAN4-208ENST00000409531 TRIAP1O43715 76 aa10.03□□□□□ -0.8
TSPAN4-208ENST00000409531 SLC25A20O43772 301 aa10.03□□□□□ -0.8
TSPAN4-208ENST00000409531 SNCGO76070 127 aa10.02□□□□□ -0.81
TSPAN4-208ENST00000409531 SMCR5Q8TEV8 140 aa10.02□□□□□ -0.81
TSPAN4-208ENST00000409531 Q9BRP9 147 aa10.02□□□□□ -0.81
TSPAN4-208ENST00000409531 COL5A1-AS1Q5SY13 56 aa10.01□□□□□ -0.81
TSPAN4-208ENST00000409531 LINC00575Q6W349 94 aa10□□□□□ -0.81
TSPAN4-208ENST00000409531 SCGB1C2P0DMR2 95 aa9.99□□□□□ -0.81
TSPAN4-208ENST00000409531 LYRM7Q5U5X0 104 aa9.98□□□□□ -0.81
TSPAN4-208ENST00000409531 ZNF706Q9Y5V0 76 aaPredicted RBP9.98□□□□□ -0.81
TSPAN4-208ENST00000409531 LRP1Q07954 4544 aaKnown RBP9.98□□□□□ -0.81
TSPAN4-208ENST00000409531 A0A1B0GX51 115 aa9.97□□□□□ -0.81
TSPAN4-208ENST00000409531 hADV29S1A0JD25 119 aa9.97□□□□□ -0.81
TSPAN4-208ENST00000409531 TAX1BP3O14907 124 aa9.97□□□□□ -0.81
TSPAN4-208ENST00000409531 PKHD1L1Q86WI1 4243 aa9.97□□□□□ -0.81
TSPAN4-208ENST00000409531 C9orf118A6NHY6 69 aa9.96□□□□□ -0.82
TSPAN4-208ENST00000409531 H3BUT2 72 aa9.95□□□□□ -0.82
TSPAN4-208ENST00000409531 ERC2-IT1O76042 136 aa9.95□□□□□ -0.82
TSPAN4-208ENST00000409531 NAA38Q9BRA0 125 aaKnown RBP9.94□□□□□ -0.82
TSPAN4-208ENST00000409531 CLEC2BQ92478 149 aa9.93□□□□□ -0.82
TSPAN4-208ENST00000409531 FAM218AQ96MZ4 157 aa9.92□□□□□ -0.82
TSPAN4-208ENST00000409531 SPRR4Q96PI1 79 aa9.92□□□□□ -0.82
TSPAN4-208ENST00000409531 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.91□□□□□ -0.82
TSPAN4-208ENST00000409531 HMCN2Q8NDA2 5059 aa9.91□□□□□ -0.82
TSPAN4-208ENST00000409531 FAT3Q8TDW7 4589 aa9.91□□□□□ -0.82
TSPAN4-208ENST00000409531 DNAL4O96015 105 aa9.9□□□□□ -0.82
TSPAN4-208ENST00000409531 Q6ZQY7 126 aa9.9□□□□□ -0.82
TSPAN4-208ENST00000409531 LINC01600Q96MT4 127 aa9.9□□□□□ -0.82
TSPAN4-208ENST00000409531 TRBV20-1A0A075B6N2 111 aa9.89□□□□□ -0.83
TSPAN4-208ENST00000409531 A0A1W2PPM0 123 aa9.89□□□□□ -0.83
TSPAN4-208ENST00000409531 GHRHP01286 108 aa9.89□□□□□ -0.83
TSPAN4-208ENST00000409531 MT1HL1P0DM35 61 aa9.89□□□□□ -0.83
TSPAN4-208ENST00000409531 FABP2P12104 132 aa9.89□□□□□ -0.83
TSPAN4-208ENST00000409531 OCIAD2Q56VL3 154 aa9.89□□□□□ -0.83
TSPAN4-208ENST00000409531 ST20-AS1Q8NBB2 130 aa9.89□□□□□ -0.83
TSPAN4-208ENST00000409531 LST1O00453 97 aa9.88□□□□□ -0.83
TSPAN4-208ENST00000409531 ATXN8Q156A1 80 aa9.88□□□□□ -0.83
TSPAN4-208ENST00000409531 GAGE2AQ6NT46 116 aa9.88□□□□□ -0.83
TSPAN4-208ENST00000409531 TEX49A0A1B0GTD5 131 aa9.87□□□□□ -0.83
TSPAN4-208ENST00000409531 TRACP01848 142 aa9.87□□□□□ -0.83
TSPAN4-208ENST00000409531 FAM229BQ4G0N7 80 aa9.87□□□□□ -0.83
TSPAN4-208ENST00000409531 IGLV5-48A0A075B6I7 105 aa9.86□□□□□ -0.83
TSPAN4-208ENST00000409531 KRTAP1-4P0C5Y4 121 aa9.86□□□□□ -0.83
TSPAN4-208ENST00000409531 LINC00483Q53H64 154 aa9.86□□□□□ -0.83
TSPAN4-208ENST00000409531 DEFB105AQ8NG35 78 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms