RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 RPL37AP61513 92 aaKnown RBP8.73□□□□□ -1.01
CHRNA1-204ENST00000409323 RYR1P21817 5038 aa8.72□□□□□ -1.01
CHRNA1-204ENST00000409323 VAMP3Q15836 100 aa8.72□□□□□ -1.01
CHRNA1-204ENST00000409323 Q5VSD8 79 aa8.72□□□□□ -1.01
CHRNA1-204ENST00000409323 NAA38Q9BRA0 125 aaKnown RBP8.72□□□□□ -1.01
CHRNA1-204ENST00000409323 TRAV13-2A0A0B4J235 113 aa8.71□□□□□ -1.02
CHRNA1-204ENST00000409323 TRBV10-2A0A0K0K1G8 114 aa8.71□□□□□ -1.02
CHRNA1-204ENST00000409323 C1orf137Q5JT78 98 aa8.71□□□□□ -1.02
CHRNA1-204ENST00000409323 K7EP34 96 aa8.7□□□□□ -1.02
CHRNA1-204ENST00000409323 FAM229AH3BQW9 127 aa8.69□□□□□ -1.02
CHRNA1-204ENST00000409323 IGLV6-57P01721 117 aa8.69□□□□□ -1.02
CHRNA1-204ENST00000409323 GTF2H5Q6ZYL4 71 aa8.69□□□□□ -1.02
CHRNA1-204ENST00000409323 Q8N1X5 172 aa8.69□□□□□ -1.02
CHRNA1-204ENST00000409323 KRTAP4-5Q9BYR2 181 aa8.69□□□□□ -1.02
CHRNA1-204ENST00000409323 FAT1Q14517 4588 aa8.68□□□□□ -1.02
CHRNA1-204ENST00000409323 REG3GQ6UW15 175 aa8.68□□□□□ -1.02
CHRNA1-204ENST00000409323 TMEM126AQ9H061 195 aa8.68□□□□□ -1.02
CHRNA1-204ENST00000409323 CBY1Q9Y3M2 126 aa8.68□□□□□ -1.02
CHRNA1-204ENST00000409323 SPCS1Q9Y6A9 102 aa8.68□□□□□ -1.02
CHRNA1-204ENST00000409323 TRBV20-1A0A075B6N2 111 aa8.67□□□□□ -1.02
CHRNA1-204ENST00000409323 H7C2G1 150 aa8.67□□□□□ -1.02
CHRNA1-204ENST00000409323 RPL13AP40429 203 aaKnown RBP8.67□□□□□ -1.02
CHRNA1-204ENST00000409323 KRTAP10-4P60372 401 aaPredicted RBP8.67□□□□□ -1.02
CHRNA1-204ENST00000409323 LYRM7Q5U5X0 104 aa8.67□□□□□ -1.02
CHRNA1-204ENST00000409323 TRAV23DV6A0A075B6W5 121 aa8.66□□□□□ -1.02
CHRNA1-204ENST00000409323 RPL28P46779 137 aaKnown RBP8.66□□□□□ -1.02
CHRNA1-204ENST00000409323 PRLHP81277 87 aa8.65□□□□□ -1.02
CHRNA1-204ENST00000409323 FAM19A1Q7Z5A9 133 aa8.65□□□□□ -1.02
CHRNA1-204ENST00000409323 KCNQ1DNQ9H478 68 aa8.65□□□□□ -1.02
CHRNA1-204ENST00000409323 PRYO14603 147 aa8.65□□□□□ -1.03
CHRNA1-204ENST00000409323 TRIAP1O43715 76 aa8.65□□□□□ -1.03
CHRNA1-204ENST00000409323 BCE1O60756 84 aa8.64□□□□□ -1.03
CHRNA1-204ENST00000409323 PLA2G1BP04054 148 aaKnown RBP8.64□□□□□ -1.03
CHRNA1-204ENST00000409323 IGLV7-43P04211 117 aa8.63□□□□□ -1.03
CHRNA1-204ENST00000409323 SMIM11BQ8TCY0 68 aa8.63□□□□□ -1.03
CHRNA1-204ENST00000409323 VPS13BQ7Z7G8 4022 aa8.63□□□□□ -1.03
CHRNA1-204ENST00000409323 ZNF73O43830 326 aaPredicted RBP8.62□□□□□ -1.03
CHRNA1-204ENST00000409323 TCL1BO95988 128 aa8.62□□□□□ -1.03
CHRNA1-204ENST00000409323 COX6CP09669 75 aa8.62□□□□□ -1.03
CHRNA1-204ENST00000409323 UBE2AP49459 152 aa8.62□□□□□ -1.03
CHRNA1-204ENST00000409323 C6orf99Q4VX62 202 aa8.62□□□□□ -1.03
CHRNA1-204ENST00000409323 ETDCA0A1B0GVM5 59 aa8.61□□□□□ -1.03
CHRNA1-204ENST00000409323 SCGB1C2P0DMR2 95 aa8.61□□□□□ -1.03
CHRNA1-204ENST00000409323 PSMB2P49721 201 aa8.61□□□□□ -1.03
CHRNA1-204ENST00000409323 Q1RN00 199 aa8.61□□□□□ -1.03
CHRNA1-204ENST00000409323 SPRR1AP35321 89 aa8.61□□□□□ -1.03
CHRNA1-204ENST00000409323 KRTAP4-16G5E9R7 235 aaPredicted RBP8.6□□□□□ -1.03
CHRNA1-204ENST00000409323 H3BMG7 143 aa8.6□□□□□ -1.03
CHRNA1-204ENST00000409323 DIRC1Q969H9 104 aa8.6□□□□□ -1.03
CHRNA1-204ENST00000409323 LINC01600Q96MT4 127 aa8.6□□□□□ -1.03
CHRNA1-204ENST00000409323 PRO0461Q9UI25 63 aa8.6□□□□□ -1.03
CHRNA1-204ENST00000409323 F8W1H4 67 aa8.59□□□□□ -1.03
CHRNA1-204ENST00000409323 HIGD2AQ9BW72 106 aa8.59□□□□□ -1.03
CHRNA1-204ENST00000409323 SRRM2Q9UQ35 2752 aaKnown RBP8.58□□□□□ -1.04
CHRNA1-204ENST00000409323 B5MCH6 92 aa8.58□□□□□ -1.04
CHRNA1-204ENST00000409323 H0YGX0 51 aa8.57□□□□□ -1.04
CHRNA1-204ENST00000409323 LST1O00453 97 aa8.57□□□□□ -1.04
CHRNA1-204ENST00000409323 KRTAP13-1Q8IUC0 172 aa8.57□□□□□ -1.04
CHRNA1-204ENST00000409323 ZNF861PO60384 105 aa8.56□□□□□ -1.04
CHRNA1-204ENST00000409323 ATXN8Q156A1 80 aa8.56□□□□□ -1.04
CHRNA1-204ENST00000409323 Q6ZRX8 168 aa8.56□□□□□ -1.04
CHRNA1-204ENST00000409323 Q9BRP9 147 aa8.56□□□□□ -1.04
CHRNA1-204ENST00000409323 HERC2O95714 4834 aa8.55□□□□□ -1.04
CHRNA1-204ENST00000409323 COX7BP24311 80 aa8.55□□□□□ -1.04
CHRNA1-204ENST00000409323 ERC2-IT1O76042 136 aa8.54□□□□□ -1.04
CHRNA1-204ENST00000409323 SMCR5Q8TEV8 140 aa8.54□□□□□ -1.04
CHRNA1-204ENST00000409323 TRACP01848 142 aa8.53□□□□□ -1.04
CHRNA1-204ENST00000409323 ELOF1P60002 83 aaKnown RBP8.53□□□□□ -1.04
CHRNA1-204ENST00000409323 FLG2Q5D862 2391 aaPredicted RBP8.53□□□□□ -1.04
CHRNA1-204ENST00000409323 SMCPP49901 116 aaPredicted RBP8.52□□□□□ -1.04
CHRNA1-204ENST00000409323 CLEC2BQ92478 149 aa8.52□□□□□ -1.04
CHRNA1-204ENST00000409323 TRBV7-6A0A0J9YX20 115 aa8.52□□□□□ -1.05
CHRNA1-204ENST00000409323 A0A1B0GX51 115 aa8.52□□□□□ -1.05
CHRNA1-204ENST00000409323 INAFM2P0DMQ5 153 aa8.52□□□□□ -1.05
CHRNA1-204ENST00000409323 SPINK6Q6UWN8 80 aa8.52□□□□□ -1.05
CHRNA1-204ENST00000409323 FAM218AQ96MZ4 157 aa8.52□□□□□ -1.05
CHRNA1-204ENST00000409323 H0Y9J4 135 aa8.51□□□□□ -1.05
CHRNA1-204ENST00000409323 PCP4P48539 62 aa8.51□□□□□ -1.05
CHRNA1-204ENST00000409323 ANAPC11Q9NYG5 84 aa8.51□□□□□ -1.05
CHRNA1-204ENST00000409323 ST20-AS1Q8NBB2 130 aa8.49□□□□□ -1.05
CHRNA1-204ENST00000409323 C9JAW5 83 aa8.48□□□□□ -1.05
CHRNA1-204ENST00000409323 SLC25A20O43772 301 aa8.48□□□□□ -1.05
CHRNA1-204ENST00000409323 H3BT86 120 aa8.47□□□□□ -1.05
CHRNA1-204ENST00000409323 LINC00575Q6W349 94 aa8.46□□□□□ -1.06
CHRNA1-204ENST00000409323 ANKRD29Q8N6D5 301 aa8.46□□□□□ -1.06
CHRNA1-204ENST00000409323 GAGE2AQ6NT46 116 aa8.45□□□□□ -1.06
CHRNA1-204ENST00000409323 DHRS4-AS1Q9P1J3 65 aa8.45□□□□□ -1.06
CHRNA1-204ENST00000409323 KRTAP1-4P0C5Y4 121 aa8.44□□□□□ -1.06
CHRNA1-204ENST00000409323 DEFB105AQ8NG35 78 aa8.44□□□□□ -1.06
CHRNA1-204ENST00000409323 hADV29S1A0JD25 119 aa8.44□□□□□ -1.06
CHRNA1-204ENST00000409323 MTURNQ8N3F0 131 aa8.44□□□□□ -1.06
CHRNA1-204ENST00000409323 ETDBQ3ZM63 59 aa8.43□□□□□ -1.06
CHRNA1-204ENST00000409323 TEN1Q86WV5 123 aa8.43□□□□□ -1.06
CHRNA1-204ENST00000409323 SPRR4Q96PI1 79 aa8.43□□□□□ -1.06
CHRNA1-204ENST00000409323 ABCA13Q86UQ4 5058 aa8.42□□□□□ -1.06
CHRNA1-204ENST00000409323 PKHD1L1Q86WI1 4243 aa8.42□□□□□ -1.06
CHRNA1-204ENST00000409323 Q6ZQY7 126 aa8.41□□□□□ -1.06
CHRNA1-204ENST00000409323 A0A087X002 238 aa8.4□□□□□ -1.06
CHRNA1-204ENST00000409323 BAALC-AS2P0C853 105 aa8.4□□□□□ -1.06
CHRNA1-204ENST00000409323 PRR26Q8N8Z3 221 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms