RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 COX6B2Q6YFQ2 88 aa9.27□□□□□ -0.93
ITGA6-202ENST00000409080 LITAFQ99732 161 aa9.26□□□□□ -0.93
ITGA6-202ENST00000409080 SMIM26A0A096LP01 95 aa9.25□□□□□ -0.93
ITGA6-202ENST00000409080 C9orf129Q5T035 196 aaKnown RBP9.25□□□□□ -0.93
ITGA6-202ENST00000409080 USP24Q9UPU5 2620 aa9.24□□□□□ -0.93
ITGA6-202ENST00000409080 ACYP2P14621 99 aa9.24□□□□□ -0.93
ITGA6-202ENST00000409080 A8MWP4 228 aa9.22□□□□□ -0.93
ITGA6-202ENST00000409080 CCDC179H3BU77 68 aa9.22□□□□□ -0.93
ITGA6-202ENST00000409080 PSORS1C2Q9UIG4 136 aa9.21□□□□□ -0.93
ITGA6-202ENST00000409080 CFAP46Q8IYW2 2715 aa9.21□□□□□ -0.93
ITGA6-202ENST00000409080 TRAV22A0A0B4J277 110 aa9.2□□□□□ -0.94
ITGA6-202ENST00000409080 TNP2Q05952 138 aa9.19□□□□□ -0.94
ITGA6-202ENST00000409080 LOC101927531A0A1B0GV80 90 aa9.18□□□□□ -0.94
ITGA6-202ENST00000409080 MRPL34Q9BQ48 92 aaKnown RBP9.18□□□□□ -0.94
ITGA6-202ENST00000409080 MAST4O15021 2626 aa9.18□□□□□ -0.94
ITGA6-202ENST00000409080 ATRQ13535 2644 aa9.17□□□□□ -0.94
ITGA6-202ENST00000409080 A0A1W2PNN7 141 aa9.17□□□□□ -0.94
ITGA6-202ENST00000409080 IGFL1Q6UW32 110 aa9.16□□□□□ -0.94
ITGA6-202ENST00000409080 CR1P17927 2039 aa9.15□□□□□ -0.94
ITGA6-202ENST00000409080 PRRC2CQ9Y520 2896 aaKnown RBP9.15□□□□□ -0.95
ITGA6-202ENST00000409080 SPRR4Q96PI1 79 aa9.14□□□□□ -0.95
ITGA6-202ENST00000409080 DNAH12Q6ZR08 3092 aa9.14□□□□□ -0.95
ITGA6-202ENST00000409080 IGLV5-37A0A075B6J1 123 aa9.13□□□□□ -0.95
ITGA6-202ENST00000409080 A0A1B0GU69 56 aa9.09□□□□□ -0.95
ITGA6-202ENST00000409080 SMCPP49901 116 aaPredicted RBP9.09□□□□□ -0.95
ITGA6-202ENST00000409080 A0A1B0GVX0 72 aa9.09□□□□□ -0.95
ITGA6-202ENST00000409080 Q8N377 158 aa9.09□□□□□ -0.95
ITGA6-202ENST00000409080 OBSCN-AS1Q96MR7 158 aa9.08□□□□□ -0.96
ITGA6-202ENST00000409080 DSCR10P59022 87 aa9.08□□□□□ -0.96
ITGA6-202ENST00000409080 C8orf17Q9NRJ1 99 aa9.08□□□□□ -0.96
ITGA6-202ENST00000409080 C9orf92A6NGG3 77 aa9.08□□□□□ -0.96
ITGA6-202ENST00000409080 CHD7Q9P2D1 2997 aa9.07□□□□□ -0.96
ITGA6-202ENST00000409080 RBM12B-AS1Q9P1G2 102 aa9.07□□□□□ -0.96
ITGA6-202ENST00000409080 PRO0461Q9UI25 63 aa9.07□□□□□ -0.96
ITGA6-202ENST00000409080 ZNF292O60281 2723 aa9.06□□□□□ -0.96
ITGA6-202ENST00000409080 PRR15Q8IV56 129 aa9.05□□□□□ -0.96
ITGA6-202ENST00000409080 LCE6AA0A183 80 aa9.04□□□□□ -0.96
ITGA6-202ENST00000409080 K7EQZ3 153 aa9.04□□□□□ -0.96
ITGA6-202ENST00000409080 ANAPC11Q9NYG5 84 aa9.04□□□□□ -0.96
ITGA6-202ENST00000409080 CHD9Q3L8U1 2897 aa9.03□□□□□ -0.96
ITGA6-202ENST00000409080 CD164Q04900 197 aa9.02□□□□□ -0.97
ITGA6-202ENST00000409080 A0A0U1RQV1 116 aa9.01□□□□□ -0.97
ITGA6-202ENST00000409080 FAM229BQ4G0N7 80 aa9□□□□□ -0.97
ITGA6-202ENST00000409080 EIF4EBP3O60516 100 aaPredicted RBP8.98□□□□□ -0.97
ITGA6-202ENST00000409080 PSPHP1O15172 72 aa8.98□□□□□ -0.97
ITGA6-202ENST00000409080 PLAC8Q9NZF1 115 aa8.98□□□□□ -0.97
ITGA6-202ENST00000409080 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.98□□□□□ -0.97
ITGA6-202ENST00000409080 UTRNP46939 3433 aa8.97□□□□□ -0.97
ITGA6-202ENST00000409080 ERC2-IT1O76042 136 aa8.97□□□□□ -0.97
ITGA6-202ENST00000409080 BAHCC1Q9P281 2608 aa8.97□□□□□ -0.97
ITGA6-202ENST00000409080 CEP350Q5VT06 3117 aa8.96□□□□□ -0.97
ITGA6-202ENST00000409080 IGLV7-46A0A075B6I9 117 aa8.95□□□□□ -0.98
ITGA6-202ENST00000409080 BPTFQ12830 3046 aa8.93□□□□□ -0.98
ITGA6-202ENST00000409080 CENPEQ02224 2701 aa8.92□□□□□ -0.98
ITGA6-202ENST00000409080 Q6ZSA8 131 aa8.92□□□□□ -0.98
ITGA6-202ENST00000409080 PRR26Q8N8Z3 221 aa8.91□□□□□ -0.98
ITGA6-202ENST00000409080 KRTAP21-3Q3LHN1 58 aa8.91□□□□□ -0.98
ITGA6-202ENST00000409080 PMAIP1Q13794 54 aa8.9□□□□□ -0.98
ITGA6-202ENST00000409080 TRANK1O15050 2925 aa8.9□□□□□ -0.99
ITGA6-202ENST00000409080 IGLV5-48A0A075B6I7 105 aa8.88□□□□□ -0.99
ITGA6-202ENST00000409080 A0A0G2JQZ4 141 aa8.88□□□□□ -0.99
ITGA6-202ENST00000409080 TEP1Q99973 2627 aaKnown RBP8.88□□□□□ -0.99
ITGA6-202ENST00000409080 UNC79Q9P2D8 2635 aa8.87□□□□□ -0.99
ITGA6-202ENST00000409080 SETXQ7Z333 2677 aaKnown RBP8.86□□□□□ -0.99
ITGA6-202ENST00000409080 A0A1W2PNM2 257 aa8.86□□□□□ -0.99
ITGA6-202ENST00000409080 HTTP42858 3142 aa8.84□□□□□ -0.99
ITGA6-202ENST00000409080 Q5VSD8 79 aa8.84□□□□□ -1
ITGA6-202ENST00000409080 STAB1Q9NY15 2570 aa8.83□□□□□ -1
ITGA6-202ENST00000409080 C1orf195Q5TG92 126 aa8.82□□□□□ -1
ITGA6-202ENST00000409080 IGSF10Q6WRI0 2623 aa8.81□□□□□ -1
ITGA6-202ENST00000409080 COL6A5A8TX70 2615 aa8.8□□□□□ -1
ITGA6-202ENST00000409080 COA5Q86WW8 74 aa8.79□□□□□ -1
ITGA6-202ENST00000409080 LINC01600Q96MT4 127 aa8.78□□□□□ -1
ITGA6-202ENST00000409080 TEX15Q9BXT5 2789 aa8.77□□□□□ -1
ITGA6-202ENST00000409080 C5orf42Q9H799 3197 aa8.77□□□□□ -1.01
ITGA6-202ENST00000409080 IGLV8-61A0A075B6I0 122 aa8.77□□□□□ -1.01
ITGA6-202ENST00000409080 KRTAP1-5Q9BYS1 174 aa8.77□□□□□ -1.01
ITGA6-202ENST00000409080 FAM104AQ969W3 186 aa8.74□□□□□ -1.01
ITGA6-202ENST00000409080 SPRR1AP35321 89 aa8.74□□□□□ -1.01
ITGA6-202ENST00000409080 RANBP2P49792 3224 aaKnown RBP8.74□□□□□ -1.01
ITGA6-202ENST00000409080 M0R2T5 61 aa8.74□□□□□ -1.01
ITGA6-202ENST00000409080 KRTAP10-1P60331 282 aa8.73□□□□□ -1.01
ITGA6-202ENST00000409080 SEC61BP60468 96 aaKnown RBP8.73□□□□□ -1.01
ITGA6-202ENST00000409080 UQCR11O14957 56 aa8.72□□□□□ -1.01
ITGA6-202ENST00000409080 RPS28P62857 69 aaKnown RBP8.71□□□□□ -1.01
ITGA6-202ENST00000409080 Q6ZR54 194 aa8.71□□□□□ -1.02
ITGA6-202ENST00000409080 SPRR1BP22528 89 aa8.69□□□□□ -1.02
ITGA6-202ENST00000409080 KRTAP10-2P60368 255 aa8.69□□□□□ -1.02
ITGA6-202ENST00000409080 AKAP13Q12802 2813 aa8.68□□□□□ -1.02
ITGA6-202ENST00000409080 MGAQ8IWI9 3026 aa8.68□□□□□ -1.02
ITGA6-202ENST00000409080 KLKP1Q107X0 134 aa8.67□□□□□ -1.02
ITGA6-202ENST00000409080 CYP4F30PQ9H0H9 118 aa8.66□□□□□ -1.02
ITGA6-202ENST00000409080 OXTP01178 125 aa8.66□□□□□ -1.02
ITGA6-202ENST00000409080 KRTAP26-1Q6PEX3 210 aa8.66□□□□□ -1.02
ITGA6-202ENST00000409080 Q8N1X5 172 aa8.66□□□□□ -1.02
ITGA6-202ENST00000409080 A8MUN3 132 aa8.65□□□□□ -1.02
ITGA6-202ENST00000409080 SPANXA2-OT1Q8N9U9 137 aa8.64□□□□□ -1.03
ITGA6-202ENST00000409080 ZCCHC13Q8WW36 166 aaKnown RBP8.62□□□□□ -1.03
ITGA6-202ENST00000409080 GCN1Q92616 2671 aaKnown RBP8.61□□□□□ -1.03
ITGA6-202ENST00000409080 FP248Q71RG6 208 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms