RNA–Protein interactions for RNA: ENST00000403303.5

CCDC178-204, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-204ENST00000403303 IGKV2-29A2NJV5 120 aaPredicted RBP1.97□□□□□ -2.09
CCDC178-204ENST00000403303 CHKB-CPT1BH3BT56 60 aa1.97□□□□□ -2.09
CCDC178-204ENST00000403303 CBLN1P23435 193 aa1.97□□□□□ -2.09
CCDC178-204ENST00000403303 LINC00208Q96KT6 92 aa1.97□□□□□ -2.09
CCDC178-204ENST00000403303 KRTAP10-8P60410 259 aa1.97□□□□□ -2.09
CCDC178-204ENST00000403303 SMIM4Q8WVI0 70 aa1.97□□□□□ -2.09
CCDC178-204ENST00000403303 OBSCN-AS1Q96MR7 158 aa1.97□□□□□ -2.09
CCDC178-204ENST00000403303 NPVFQ9HCQ7 196 aa1.97□□□□□ -2.09
CCDC178-204ENST00000403303 SCP2D1Q9UJQ7 156 aa1.97□□□□□ -2.09
CCDC178-204ENST00000403303 PIGBOS1A0A0B4J2F0 54 aa1.96□□□□□ -2.09
CCDC178-204ENST00000403303 H3BUX3 64 aa1.96□□□□□ -2.09
CCDC178-204ENST00000403303 COX7CP15954 63 aa1.96□□□□□ -2.09
CCDC178-204ENST00000403303 PCNX1Q96RV3 2341 aa1.96□□□□□ -2.1
CCDC178-204ENST00000403303 EPPK1P58107 5090 aaKnown RBP1.96□□□□□ -2.1
CCDC178-204ENST00000403303 K7EIM0 57 aa1.96□□□□□ -2.1
CCDC178-204ENST00000403303 KRTAP10-12P60413 245 aa1.96□□□□□ -2.1
CCDC178-204ENST00000403303 PRCDQ00LT1 54 aa1.96□□□□□ -2.1
CCDC178-204ENST00000403303 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
CCDC178-204ENST00000403303 A0A087WXM4 84 aa1.96□□□□□ -2.1
CCDC178-204ENST00000403303 H3BQ15 152 aa1.96□□□□□ -2.1
CCDC178-204ENST00000403303 CFDP00746 253 aaPredicted RBP1.96□□□□□ -2.1
CCDC178-204ENST00000403303 IGKV4-1P06312 121 aa1.96□□□□□ -2.1
CCDC178-204ENST00000403303 PEA15Q15121 130 aa1.96□□□□□ -2.1
CCDC178-204ENST00000403303 TDRG1Q3Y452 100 aa1.96□□□□□ -2.1
CCDC178-204ENST00000403303 Q6ZRN7 208 aaPredicted RBP1.96□□□□□ -2.1
CCDC178-204ENST00000403303 LINC00052Q96N35 136 aa1.96□□□□□ -2.1
CCDC178-204ENST00000403303 TRBV6-1A0A0K0K1D8 114 aa1.95□□□□□ -2.1
CCDC178-204ENST00000403303 NDUFA4O00483 81 aa1.95□□□□□ -2.1
CCDC178-204ENST00000403303 ZNF56Q15929 161 aa1.95□□□□□ -2.1
CCDC178-204ENST00000403303 KRTAP26-1Q6PEX3 210 aa1.95□□□□□ -2.1
CCDC178-204ENST00000403303 ARHGAP5-AS1Q96IT6 56 aa1.95□□□□□ -2.1
CCDC178-204ENST00000403303 NOTCH2Q04721 2471 aa1.95□□□□□ -2.1
CCDC178-204ENST00000403303 MYO9AB2RTY4 2548 aa1.95□□□□□ -2.1
CCDC178-204ENST00000403303 FLNBO75369 2602 aaKnown RBP1.95□□□□□ -2.1
CCDC178-204ENST00000403303 TRBV6-5A0A0K0K1A5 114 aa1.95□□□□□ -2.1
CCDC178-204ENST00000403303 UBE2L5PA0A1B0GUS4 154 aa1.95□□□□□ -2.1
CCDC178-204ENST00000403303 H3BNG1 76 aa1.95□□□□□ -2.1
CCDC178-204ENST00000403303 KNL1Q8NG31 2342 aa1.95□□□□□ -2.1
CCDC178-204ENST00000403303 USF3Q68DE3 2245 aa1.95□□□□□ -2.1
CCDC178-204ENST00000403303 CYP2G1PQ6ZSU1 146 aa1.95□□□□□ -2.1
CCDC178-204ENST00000403303 JMJD7-PLA2G4BH0Y9G9 81 aa1.94□□□□□ -2.1
CCDC178-204ENST00000403303 NMBP08949 121 aa1.94□□□□□ -2.1
CCDC178-204ENST00000403303 MIFP14174 115 aa1.94□□□□□ -2.1
CCDC178-204ENST00000403303 SPANXN1Q5VSR9 72 aa1.94□□□□□ -2.1
CCDC178-204ENST00000403303 IGFL1Q6UW32 110 aa1.94□□□□□ -2.1
CCDC178-204ENST00000403303 ALKAL2Q6UX46 152 aa1.94□□□□□ -2.1
CCDC178-204ENST00000403303 APOC3P02656 99 aa1.94□□□□□ -2.1
CCDC178-204ENST00000403303 DEFB114Q30KQ6 69 aa1.94□□□□□ -2.1
CCDC178-204ENST00000403303 C6orf201Q7Z4U5 140 aa1.94□□□□□ -2.1
CCDC178-204ENST00000403303 ROS1P08922 2347 aa1.93□□□□□ -2.1
CCDC178-204ENST00000403303 WT1-ASQ06250 92 aa1.93□□□□□ -2.1
CCDC178-204ENST00000403303 ZNF818PQ6ZRF7 136 aa1.93□□□□□ -2.1
CCDC178-204ENST00000403303 HIVEP2P31629 2446 aa1.93□□□□□ -2.1
CCDC178-204ENST00000403303 LCE6AA0A183 80 aa1.93□□□□□ -2.1
CCDC178-204ENST00000403303 NAP1L6A6NFF2 107 aa1.93□□□□□ -2.1
CCDC178-204ENST00000403303 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
CCDC178-204ENST00000403303 TMEM14CQ9P0S9 112 aa1.93□□□□□ -2.1
CCDC178-204ENST00000403303 PSORS1C2Q9UIG4 136 aa1.93□□□□□ -2.1
CCDC178-204ENST00000403303 SMIM31A0A1B0GVY4 71 aa1.93□□□□□ -2.1
CCDC178-204ENST00000403303 NAV2Q8IVL1 2488 aa1.93□□□□□ -2.1
CCDC178-204ENST00000403303 TVP23CQ96ET8 276 aa1.93□□□□□ -2.1
CCDC178-204ENST00000403303 TRGV9Q99603 122 aa1.93□□□□□ -2.1
CCDC178-204ENST00000403303 CYSTM1Q9H1C7 97 aa1.93□□□□□ -2.1
CCDC178-204ENST00000403303 PPP1R17O96001 155 aa1.92□□□□□ -2.1
CCDC178-204ENST00000403303 PDE6HQ13956 83 aa1.92□□□□□ -2.1
CCDC178-204ENST00000403303 AQP10Q96PS8 301 aa1.92□□□□□ -2.1
CCDC178-204ENST00000403303 ARL2-SNX15V9GYD0 113 aa1.92□□□□□ -2.1
CCDC178-204ENST00000403303 LCE1EQ5T753 118 aa1.92□□□□□ -2.1
CCDC178-204ENST00000403303 KRTAP12-2P59991 146 aa1.92□□□□□ -2.1
CCDC178-204ENST00000403303 RPL39P5Q59GN2 51 aa1.92□□□□□ -2.1
CCDC178-204ENST00000403303 NXT2Q9NPJ8 142 aaKnown RBP1.92□□□□□ -2.1
CCDC178-204ENST00000403303 TRBV6-4A0A1B0GX49 114 aa1.91□□□□□ -2.1
CCDC178-204ENST00000403303 NUPR1O60356 82 aa1.91□□□□□ -2.1
CCDC178-204ENST00000403303 IGLC1P0CG04 106 aa1.91□□□□□ -2.1
CCDC178-204ENST00000403303 EDDM3BP56851 147 aa1.91□□□□□ -2.1
CCDC178-204ENST00000403303 C10orf99Q6UWK7 81 aa1.91□□□□□ -2.1
CCDC178-204ENST00000403303 SPTA1P02549 2419 aa1.91□□□□□ -2.1
CCDC178-204ENST00000403303 ETDBQ3ZM63 59 aa1.91□□□□□ -2.1
CCDC178-204ENST00000403303 ABCA13Q86UQ4 5058 aa1.91□□□□□ -2.1
CCDC178-204ENST00000403303 TRGV2A0A075B6R0 118 aa1.9□□□□□ -2.1
CCDC178-204ENST00000403303 SNRPGP15A8MWD9 76 aa1.9□□□□□ -2.1
CCDC178-204ENST00000403303 IGLC2P0DOY2 106 aa1.9□□□□□ -2.1
CCDC178-204ENST00000403303 Q0VG73 95 aa1.9□□□□□ -2.1
CCDC178-204ENST00000403303 C5orf38Q86SI9 138 aa1.9□□□□□ -2.1
CCDC178-204ENST00000403303 IGKV3-7A0A075B6H7 116 aa1.9□□□□□ -2.11
CCDC178-204ENST00000403303 RNASE3P12724 160 aaKnown RBP1.9□□□□□ -2.11
CCDC178-204ENST00000403303 S100A16Q96FQ6 103 aaKnown RBP1.9□□□□□ -2.11
CCDC178-204ENST00000403303 SFT2D2O95562 160 aa1.9□□□□□ -2.11
CCDC178-204ENST00000403303 KRTAP12-1P59990 96 aa1.9□□□□□ -2.11
CCDC178-204ENST00000403303 KRTAP1-5Q9BYS1 174 aa1.9□□□□□ -2.11
CCDC178-204ENST00000403303 KRTAP10-4P60372 401 aaPredicted RBP1.89□□□□□ -2.11
CCDC178-204ENST00000403303 NMES1Q9C002 83 aa1.89□□□□□ -2.11
CCDC178-204ENST00000403303 APLNQ9ULZ1 77 aa1.89□□□□□ -2.11
CCDC178-204ENST00000403303 LENEPQ9Y5L5 61 aa1.89□□□□□ -2.11
CCDC178-204ENST00000403303 POLQO75417 2590 aa1.89□□□□□ -2.11
CCDC178-204ENST00000403303 FXYD3Q14802 87 aa1.89□□□□□ -2.11
CCDC178-204ENST00000403303 PMCHL1Q16048 86 aa1.88□□□□□ -2.11
CCDC178-204ENST00000403303 SBSPONQ8IVN8 264 aa1.88□□□□□ -2.11
CCDC178-204ENST00000403303 PPP1R1CQ8WVI7 109 aa1.88□□□□□ -2.11
CCDC178-204ENST00000403303 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms