RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 SETXQ7Z333 2677 aaKnown RBP11.85□□□□□ -0.51
SNED1-204ENST00000401884 A0A0U1RQV1 116 aa11.85□□□□□ -0.51
SNED1-204ENST00000401884 KRTAP1-1Q07627 177 aa11.85□□□□□ -0.51
SNED1-204ENST00000401884 COL6A5A8TX70 2615 aa11.84□□□□□ -0.51
SNED1-204ENST00000401884 LINC00588Q9Y4M8 146 aa11.84□□□□□ -0.51
SNED1-204ENST00000401884 Q6ZRX8 168 aa11.83□□□□□ -0.51
SNED1-204ENST00000401884 CASC2Q6XLA1 102 aa11.83□□□□□ -0.52
SNED1-204ENST00000401884 BCE1O60756 84 aa11.82□□□□□ -0.52
SNED1-204ENST00000401884 MYO15AQ9UKN7 3530 aa11.82□□□□□ -0.52
SNED1-204ENST00000401884 SPTSSBQ8NFR3 76 aa11.8□□□□□ -0.52
SNED1-204ENST00000401884 HCG22E2RYF7 251 aa11.8□□□□□ -0.52
SNED1-204ENST00000401884 V9GYY9 64 aa11.8□□□□□ -0.52
SNED1-204ENST00000401884 C9orf129Q5T035 196 aaKnown RBP11.79□□□□□ -0.52
SNED1-204ENST00000401884 DNAH10OSP0CZ25 163 aa11.79□□□□□ -0.52
SNED1-204ENST00000401884 Q8NBF4 154 aa11.79□□□□□ -0.52
SNED1-204ENST00000401884 SMIM29Q86T20 159 aa11.78□□□□□ -0.52
SNED1-204ENST00000401884 ST20-AS1Q8NBB2 130 aa11.78□□□□□ -0.52
SNED1-204ENST00000401884 DMXL1Q9Y485 3027 aa11.78□□□□□ -0.52
SNED1-204ENST00000401884 CR1P17927 2039 aa11.75□□□□□ -0.53
SNED1-204ENST00000401884 LINC00528Q8N1L1 170 aa11.75□□□□□ -0.53
SNED1-204ENST00000401884 A0A1B0GW54 56 aa11.75□□□□□ -0.53
SNED1-204ENST00000401884 TM2D3Q9BRN9 247 aa11.75□□□□□ -0.53
SNED1-204ENST00000401884 IGHV6-1A0A0B4J1U7 121 aa11.74□□□□□ -0.53
SNED1-204ENST00000401884 SERTAD4-AS1Q5TG53 156 aa11.74□□□□□ -0.53
SNED1-204ENST00000401884 TNRC18O15417 2968 aaPredicted RBP11.74□□□□□ -0.53
SNED1-204ENST00000401884 CIRBP-AS1Q8TBR5 109 aa11.74□□□□□ -0.53
SNED1-204ENST00000401884 IGLV5-52A0A0A0MRZ9 124 aa11.73□□□□□ -0.53
SNED1-204ENST00000401884 LINC00476Q8WZB0 136 aa11.73□□□□□ -0.53
SNED1-204ENST00000401884 RPS28P62857 69 aaKnown RBP11.73□□□□□ -0.53
SNED1-204ENST00000401884 C15orf56Q8N910 161 aa11.73□□□□□ -0.53
SNED1-204ENST00000401884 FAM168BA1KXE4 195 aa11.72□□□□□ -0.53
SNED1-204ENST00000401884 KRTAP10-11P60412 298 aa11.72□□□□□ -0.53
SNED1-204ENST00000401884 H0Y9P7 68 aa11.72□□□□□ -0.53
SNED1-204ENST00000401884 MDFIQ99750 246 aa11.71□□□□□ -0.53
SNED1-204ENST00000401884 LINC01600Q96MT4 127 aa11.71□□□□□ -0.53
SNED1-204ENST00000401884 KCNQ1DNQ9H478 68 aa11.71□□□□□ -0.54
SNED1-204ENST00000401884 PHF5AQ7RTV0 110 aaKnown RBP11.69□□□□□ -0.54
SNED1-204ENST00000401884 NBEAL1Q6ZS30 2694 aa11.69□□□□□ -0.54
SNED1-204ENST00000401884 PCOTHQ58A44 107 aa11.68□□□□□ -0.54
SNED1-204ENST00000401884 C16orf90A8MZG2 172 aa11.68□□□□□ -0.54
SNED1-204ENST00000401884 A6NED7 52 aa11.67□□□□□ -0.54
SNED1-204ENST00000401884 ASH1LQ9NR48 2969 aaKnown RBP11.67□□□□□ -0.54
SNED1-204ENST00000401884 CHTF8P0CG12 524 aa11.67□□□□□ -0.54
SNED1-204ENST00000401884 USP34Q70CQ2 3546 aa11.66□□□□□ -0.54
SNED1-204ENST00000401884 C1orf134Q5TEV5 83 aa11.66□□□□□ -0.54
SNED1-204ENST00000401884 ZANQ9Y493 2812 aa11.66□□□□□ -0.54
SNED1-204ENST00000401884 IGLV1-50A0A075B6I6 118 aa11.65□□□□□ -0.55
SNED1-204ENST00000401884 EPM2AB3EWF7 344 aa11.64□□□□□ -0.55
SNED1-204ENST00000401884 TRBV7-4A0A0J9YYF1 115 aa11.64□□□□□ -0.55
SNED1-204ENST00000401884 SEC61GP60059 68 aa11.63□□□□□ -0.55
SNED1-204ENST00000401884 hDV103S1A0JD37 113 aa11.62□□□□□ -0.55
SNED1-204ENST00000401884 PSPHP1O15172 72 aa11.62□□□□□ -0.55
SNED1-204ENST00000401884 C1orf64Q8NEQ6 169 aa11.61□□□□□ -0.55
SNED1-204ENST00000401884 ITPR2Q14571 2701 aa11.61□□□□□ -0.55
SNED1-204ENST00000401884 Q8N377 158 aa11.61□□□□□ -0.55
SNED1-204ENST00000401884 NBDYA0A0U1RRE5 68 aa11.6□□□□□ -0.55
SNED1-204ENST00000401884 K7EIL1 84 aa11.58□□□□□ -0.56
SNED1-204ENST00000401884 C4orf26Q17RF5 130 aa11.58□□□□□ -0.56
SNED1-204ENST00000401884 UTP20O75691 2785 aaKnown RBP11.58□□□□□ -0.56
SNED1-204ENST00000401884 MOBPQ13875 183 aa11.57□□□□□ -0.56
SNED1-204ENST00000401884 OBSCN-AS1Q96MR7 158 aa11.57□□□□□ -0.56
SNED1-204ENST00000401884 PRR15LQ9BU68 103 aa11.56□□□□□ -0.56
SNED1-204ENST00000401884 RPL37AP61513 92 aaKnown RBP11.55□□□□□ -0.56
SNED1-204ENST00000401884 K7EQZ3 153 aa11.55□□□□□ -0.56
SNED1-204ENST00000401884 SVIPQ8NHG7 77 aa11.54□□□□□ -0.56
SNED1-204ENST00000401884 NSD1Q96L73 2696 aaPredicted RBP11.54□□□□□ -0.56
SNED1-204ENST00000401884 C1orf195Q5TG92 126 aa11.53□□□□□ -0.56
SNED1-204ENST00000401884 TLX1NBP0CAT3 122 aa11.52□□□□□ -0.56
SNED1-204ENST00000401884 CASC10Q5T4H9 136 aa11.52□□□□□ -0.57
SNED1-204ENST00000401884 KLKP1Q107X0 134 aa11.51□□□□□ -0.57
SNED1-204ENST00000401884 RETNLBQ9BQ08 111 aa11.49□□□□□ -0.57
SNED1-204ENST00000401884 A0A0G2JQZ4 141 aa11.48□□□□□ -0.57
SNED1-204ENST00000401884 A0A1W2PNN7 141 aa11.48□□□□□ -0.57
SNED1-204ENST00000401884 IGFL1Q6UW32 110 aa11.48□□□□□ -0.57
SNED1-204ENST00000401884 PLA2G2DQ9UNK4 145 aa11.48□□□□□ -0.57
SNED1-204ENST00000401884 ERC2-IT1O76042 136 aa11.48□□□□□ -0.57
SNED1-204ENST00000401884 TP53AIP1Q9HCN2 124 aa11.47□□□□□ -0.57
SNED1-204ENST00000401884 RTL8CO15255 209 aa11.46□□□□□ -0.57
SNED1-204ENST00000401884 TRAV22A0A0B4J277 110 aa11.45□□□□□ -0.58
SNED1-204ENST00000401884 PMAIP1Q13794 54 aa11.45□□□□□ -0.58
SNED1-204ENST00000401884 CELSR2Q9HCU4 2923 aa11.45□□□□□ -0.58
SNED1-204ENST00000401884 A0A1W2PNM2 257 aa11.45□□□□□ -0.58
SNED1-204ENST00000401884 H7BZZ5 65 aa11.45□□□□□ -0.58
SNED1-204ENST00000401884 Q8NDZ9 215 aa11.44□□□□□ -0.58
SNED1-204ENST00000401884 PRO0628Q9UI54 55 aa11.44□□□□□ -0.58
SNED1-204ENST00000401884 NF1P21359 2839 aa11.42□□□□□ -0.58
SNED1-204ENST00000401884 H3BPC8 53 aa11.42□□□□□ -0.58
SNED1-204ENST00000401884 HRNRQ86YZ3 2850 aaPredicted RBP11.41□□□□□ -0.58
SNED1-204ENST00000401884 A8MWP4 228 aa11.41□□□□□ -0.58
SNED1-204ENST00000401884 C9orf163Q8N9P6 203 aa11.41□□□□□ -0.58
SNED1-204ENST00000401884 WIPF1O43516 503 aa11.39□□□□□ -0.59
SNED1-204ENST00000401884 IGLV5-48A0A075B6I7 105 aa11.39□□□□□ -0.59
SNED1-204ENST00000401884 APCP25054 2843 aa11.38□□□□□ -0.59
SNED1-204ENST00000401884 LIMD2Q9BT23 127 aa11.38□□□□□ -0.59
SNED1-204ENST00000401884 WDFY3Q8IZQ1 3526 aa11.36□□□□□ -0.59
SNED1-204ENST00000401884 PRR15Q8IV56 129 aa11.35□□□□□ -0.59
SNED1-204ENST00000401884 SPACA4Q8TDM5 124 aa11.35□□□□□ -0.59
SNED1-204ENST00000401884 NIPBLQ6KC79 2804 aaeCLIP11.33□□□□□ -0.6
SNED1-204ENST00000401884 IGKV2D-30A0A075B6S6 120 aa11.33□□□□□ -0.6
SNED1-204ENST00000401884 IGKV2-30P06310 120 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms