RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 SPRR1AP35321 89 aa9.72□□□□□ -0.85
HMGA1-204ENST00000401473 SNHG12Q9BXW3 62 aa9.72□□□□□ -0.85
HMGA1-204ENST00000401473 A6NDN8 102 aa9.71□□□□□ -0.85
HMGA1-204ENST00000401473 PRYO14603 147 aa9.71□□□□□ -0.85
HMGA1-204ENST00000401473 CFC1BP0CG36 223 aa9.71□□□□□ -0.85
HMGA1-204ENST00000401473 CFC1P0CG37 223 aa9.71□□□□□ -0.85
HMGA1-204ENST00000401473 INAFM2P0DMQ5 153 aa9.71□□□□□ -0.85
HMGA1-204ENST00000401473 FXYD2P54710 66 aa9.71□□□□□ -0.85
HMGA1-204ENST00000401473 KRTAP13-1Q8IUC0 172 aa9.7□□□□□ -0.86
HMGA1-204ENST00000401473 TRAV23DV6A0A075B6W5 121 aa9.7□□□□□ -0.86
HMGA1-204ENST00000401473 HSD52Q0P140 79 aa9.7□□□□□ -0.86
HMGA1-204ENST00000401473 TRAV13-2A0A0B4J235 113 aa9.69□□□□□ -0.86
HMGA1-204ENST00000401473 ZNF861PO60384 105 aa9.69□□□□□ -0.86
HMGA1-204ENST00000401473 PRLHP81277 87 aa9.69□□□□□ -0.86
HMGA1-204ENST00000401473 M0R143 59 aa9.68□□□□□ -0.86
HMGA1-204ENST00000401473 FAM19A1Q7Z5A9 133 aa9.68□□□□□ -0.86
HMGA1-204ENST00000401473 ZNF73O43830 326 aaPredicted RBP9.68□□□□□ -0.86
HMGA1-204ENST00000401473 FAT3Q8TDW7 4589 aa9.66□□□□□ -0.86
HMGA1-204ENST00000401473 SPINK6Q6UWN8 80 aa9.66□□□□□ -0.86
HMGA1-204ENST00000401473 A0A1B0GV90 55 aa9.66□□□□□ -0.86
HMGA1-204ENST00000401473 UBE2AP49459 152 aa9.66□□□□□ -0.86
HMGA1-204ENST00000401473 B5MCH6 92 aa9.65□□□□□ -0.86
HMGA1-204ENST00000401473 SMIM11BQ8TCY0 68 aa9.65□□□□□ -0.86
HMGA1-204ENST00000401473 ETDCA0A1B0GVM5 59 aa9.64□□□□□ -0.87
HMGA1-204ENST00000401473 RPL28P46779 137 aaKnown RBP9.64□□□□□ -0.87
HMGA1-204ENST00000401473 C6orf99Q4VX62 202 aa9.64□□□□□ -0.87
HMGA1-204ENST00000401473 H0Y9J4 135 aa9.64□□□□□ -0.87
HMGA1-204ENST00000401473 BVES-AS1Q5T3Y7 98 aa9.64□□□□□ -0.87
HMGA1-204ENST00000401473 A0A0B4J2C4 111 aa9.63□□□□□ -0.87
HMGA1-204ENST00000401473 TMEM238LA0A1B0GVL6 79 aa9.63□□□□□ -0.87
HMGA1-204ENST00000401473 A6NJY4 79 aa9.63□□□□□ -0.87
HMGA1-204ENST00000401473 RPL13AP40429 203 aaKnown RBP9.62□□□□□ -0.87
HMGA1-204ENST00000401473 CBY1Q9Y3M2 126 aa9.62□□□□□ -0.87
HMGA1-204ENST00000401473 Q6ZRX8 168 aa9.62□□□□□ -0.87
HMGA1-204ENST00000401473 DIRC1Q969H9 104 aa9.62□□□□□ -0.87
HMGA1-204ENST00000401473 RAB37Q96AX2 223 aa9.62□□□□□ -0.87
HMGA1-204ENST00000401473 Q9BRP9 147 aa9.62□□□□□ -0.87
HMGA1-204ENST00000401473 NHP2Q9NX24 153 aaKnown RBP9.62□□□□□ -0.87
HMGA1-204ENST00000401473 HINT1P49773 126 aaPredicted RBP9.61□□□□□ -0.87
HMGA1-204ENST00000401473 HIGD2AQ9BW72 106 aa9.61□□□□□ -0.87
HMGA1-204ENST00000401473 SMCR5Q8TEV8 140 aa9.6□□□□□ -0.87
HMGA1-204ENST00000401473 PRO1854Q9UHT4 67 aa9.6□□□□□ -0.87
HMGA1-204ENST00000401473 H7C2G1 150 aa9.59□□□□□ -0.87
HMGA1-204ENST00000401473 K7ERJ3 54 aa9.59□□□□□ -0.87
HMGA1-204ENST00000401473 A0A1B0GWB2 263 aa9.59□□□□□ -0.87
HMGA1-204ENST00000401473 ERC2-IT1O76042 136 aa9.58□□□□□ -0.88
HMGA1-204ENST00000401473 ELOF1P60002 83 aaKnown RBP9.58□□□□□ -0.88
HMGA1-204ENST00000401473 BATFQ16520 125 aa9.58□□□□□ -0.88
HMGA1-204ENST00000401473 DMBT1Q9UGM3 2413 aaPredicted RBP9.58□□□□□ -0.88
HMGA1-204ENST00000401473 KRTAP1-4P0C5Y4 121 aa9.57□□□□□ -0.88
HMGA1-204ENST00000401473 TNXBP22105 4242 aa9.56□□□□□ -0.88
HMGA1-204ENST00000401473 TRBV7-6A0A0J9YX20 115 aa9.56□□□□□ -0.88
HMGA1-204ENST00000401473 COX7BP24311 80 aa9.56□□□□□ -0.88
HMGA1-204ENST00000401473 HERC1Q15751 4861 aa9.54□□□□□ -0.88
HMGA1-204ENST00000401473 COL5A1-AS1Q5SY13 56 aa9.54□□□□□ -0.88
HMGA1-204ENST00000401473 ANAPC11Q9NYG5 84 aa9.54□□□□□ -0.88
HMGA1-204ENST00000401473 KRTAP29-1A8MX34 341 aaPredicted RBP9.52□□□□□ -0.89
HMGA1-204ENST00000401473 VAMP3Q15836 100 aa9.51□□□□□ -0.89
HMGA1-204ENST00000401473 Q1RN00 199 aa9.51□□□□□ -0.89
HMGA1-204ENST00000401473 LINC01600Q96MT4 127 aa9.51□□□□□ -0.89
HMGA1-204ENST00000401473 DHRS4-AS1Q9P1J3 65 aa9.51□□□□□ -0.89
HMGA1-204ENST00000401473 TSPAN13O95857 204 aa9.5□□□□□ -0.89
HMGA1-204ENST00000401473 ST20-AS1Q8NBB2 130 aa9.5□□□□□ -0.89
HMGA1-204ENST00000401473 OXTP01178 125 aa9.49□□□□□ -0.89
HMGA1-204ENST00000401473 SPRR4Q96PI1 79 aa9.49□□□□□ -0.89
HMGA1-204ENST00000401473 TRIAP1O43715 76 aa9.49□□□□□ -0.89
HMGA1-204ENST00000401473 LINC00575Q6W349 94 aa9.49□□□□□ -0.89
HMGA1-204ENST00000401473 A0A087X002 238 aa9.48□□□□□ -0.89
HMGA1-204ENST00000401473 MT1HL1P0DM35 61 aa9.48□□□□□ -0.89
HMGA1-204ENST00000401473 PRR26Q8N8Z3 221 aa9.47□□□□□ -0.89
HMGA1-204ENST00000401473 GAGE2AQ6NT46 116 aa9.46□□□□□ -0.9
HMGA1-204ENST00000401473 FAM218AQ96MZ4 157 aa9.46□□□□□ -0.9
HMGA1-204ENST00000401473 KRTAP10-8P60410 259 aa9.45□□□□□ -0.9
HMGA1-204ENST00000401473 hADV29S1A0JD25 119 aa9.44□□□□□ -0.9
HMGA1-204ENST00000401473 H0YGX0 51 aa9.44□□□□□ -0.9
HMGA1-204ENST00000401473 PSMB2P49721 201 aa9.44□□□□□ -0.9
HMGA1-204ENST00000401473 ZNF706Q9Y5V0 76 aaPredicted RBP9.44□□□□□ -0.9
HMGA1-204ENST00000401473 J3QL48 77 aa9.43□□□□□ -0.9
HMGA1-204ENST00000401473 LINC00483Q53H64 154 aa9.43□□□□□ -0.9
HMGA1-204ENST00000401473 SLC25A20O43772 301 aa9.42□□□□□ -0.9
HMGA1-204ENST00000401473 LINC01547P58512 204 aaPredicted RBP9.42□□□□□ -0.9
HMGA1-204ENST00000401473 KRTAP13-2Q52LG2 175 aa9.42□□□□□ -0.9
HMGA1-204ENST00000401473 NAA38Q9BRA0 125 aaKnown RBP9.42□□□□□ -0.9
HMGA1-204ENST00000401473 CRYGAP11844 174 aa9.41□□□□□ -0.9
HMGA1-204ENST00000401473 FAM229BQ4G0N7 80 aa9.41□□□□□ -0.9
HMGA1-204ENST00000401473 DEFB105AQ8NG35 78 aa9.41□□□□□ -0.9
HMGA1-204ENST00000401473 CLEC2BQ92478 149 aa9.41□□□□□ -0.9
HMGA1-204ENST00000401473 TAX1BP3O14907 124 aa9.4□□□□□ -0.9
HMGA1-204ENST00000401473 Q6ZQY7 126 aa9.4□□□□□ -0.91
HMGA1-204ENST00000401473 IGLV5-48A0A075B6I7 105 aa9.38□□□□□ -0.91
HMGA1-204ENST00000401473 COX6CP09669 75 aa9.38□□□□□ -0.91
HMGA1-204ENST00000401473 SPRR1BP22528 89 aa9.38□□□□□ -0.91
HMGA1-204ENST00000401473 Q8N377 158 aa9.38□□□□□ -0.91
HMGA1-204ENST00000401473 C3orf22Q8N5N4 141 aa9.38□□□□□ -0.91
HMGA1-204ENST00000401473 TEX49A0A1B0GTD5 131 aa9.36□□□□□ -0.91
HMGA1-204ENST00000401473 SCGB1C2P0DMR2 95 aa9.36□□□□□ -0.91
HMGA1-204ENST00000401473 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.36□□□□□ -0.91
HMGA1-204ENST00000401473 SMIM29Q86T20 159 aa9.36□□□□□ -0.91
HMGA1-204ENST00000401473 TYMSOSQ8TAI1 123 aa9.35□□□□□ -0.91
HMGA1-204ENST00000401473 A0A1B0GX51 115 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms