RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 NOTCH2Q04721 2471 aa5.63□□□□□ -1.51
CTNND1-205ENST00000399050 Q5XG85 94 aa5.63□□□□□ -1.51
CTNND1-205ENST00000399050 LINC00612Q8N6U2 182 aa5.63□□□□□ -1.51
CTNND1-205ENST00000399050 OCR1Q9BZK8 76 aa5.63□□□□□ -1.51
CTNND1-205ENST00000399050 CDC42SE1Q9NRR8 79 aa5.63□□□□□ -1.51
CTNND1-205ENST00000399050 C19orf73Q9NVV2 129 aa5.62□□□□□ -1.51
CTNND1-205ENST00000399050 TLX1NBP0CAT3 122 aa5.62□□□□□ -1.51
CTNND1-205ENST00000399050 FAM104AQ969W3 186 aa5.61□□□□□ -1.51
CTNND1-205ENST00000399050 CYSTM1Q9H1C7 97 aa5.61□□□□□ -1.51
CTNND1-205ENST00000399050 FAM229BQ4G0N7 80 aa5.6□□□□□ -1.51
CTNND1-205ENST00000399050 IGLV5-48A0A075B6I7 105 aa5.58□□□□□ -1.52
CTNND1-205ENST00000399050 KRTAP24-1Q3LI83 254 aa5.57□□□□□ -1.52
CTNND1-205ENST00000399050 A0A096LNT2 108 aa5.57□□□□□ -1.52
CTNND1-205ENST00000399050 KRTAP10-11P60412 298 aa5.56□□□□□ -1.52
CTNND1-205ENST00000399050 COX6B2Q6YFQ2 88 aa5.56□□□□□ -1.52
CTNND1-205ENST00000399050 KRTAP10-3P60369 221 aa5.56□□□□□ -1.52
CTNND1-205ENST00000399050 NCOR2Q9Y618 2525 aa5.55□□□□□ -1.52
CTNND1-205ENST00000399050 FP248Q71RG6 208 aaPredicted RBP5.55□□□□□ -1.52
CTNND1-205ENST00000399050 ANAPC11Q9NYG5 84 aa5.55□□□□□ -1.52
CTNND1-205ENST00000399050 LRRK2Q5S007 2527 aa5.54□□□□□ -1.52
CTNND1-205ENST00000399050 ZNF861PO60384 105 aa5.54□□□□□ -1.52
CTNND1-205ENST00000399050 CASC10Q5T4H9 136 aa5.54□□□□□ -1.52
CTNND1-205ENST00000399050 MYO18BQ8IUG5 2567 aa5.54□□□□□ -1.52
CTNND1-205ENST00000399050 ABCA12Q86UK0 2595 aa5.53□□□□□ -1.52
CTNND1-205ENST00000399050 RBM12B-AS1Q9P1G2 102 aa5.53□□□□□ -1.52
CTNND1-205ENST00000399050 DOPEY1Q5JWR5 2465 aa5.53□□□□□ -1.52
CTNND1-205ENST00000399050 IGLV5-37A0A075B6J1 123 aa5.52□□□□□ -1.53
CTNND1-205ENST00000399050 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
CTNND1-205ENST00000399050 Q75L30 129 aa5.52□□□□□ -1.53
CTNND1-205ENST00000399050 USP9XQ93008 2570 aaPredicted RBP5.52□□□□□ -1.53
CTNND1-205ENST00000399050 SPRR4Q96PI1 79 aa5.52□□□□□ -1.53
CTNND1-205ENST00000399050 IGLV7-46A0A075B6I9 117 aa5.5□□□□□ -1.53
CTNND1-205ENST00000399050 TLN2Q9Y4G6 2542 aa5.5□□□□□ -1.53
CTNND1-205ENST00000399050 PRR26Q8N8Z3 221 aa5.5□□□□□ -1.53
CTNND1-205ENST00000399050 ANKRD17O75179 2603 aaKnown RBP5.49□□□□□ -1.53
CTNND1-205ENST00000399050 C9orf92A6NGG3 77 aa5.49□□□□□ -1.53
CTNND1-205ENST00000399050 OXTP01178 125 aa5.49□□□□□ -1.53
CTNND1-205ENST00000399050 C9orf163Q8N9P6 203 aa5.49□□□□□ -1.53
CTNND1-205ENST00000399050 LINC00483Q53H64 154 aa5.49□□□□□ -1.53
CTNND1-205ENST00000399050 CNBPP62633 177 aaKnown RBP5.48□□□□□ -1.53
CTNND1-205ENST00000399050 UTRNP46939 3433 aa5.48□□□□□ -1.53
CTNND1-205ENST00000399050 A0A0D9SG42 100 aa5.48□□□□□ -1.53
CTNND1-205ENST00000399050 CEP350Q5VT06 3117 aa5.48□□□□□ -1.53
CTNND1-205ENST00000399050 Q8N1X5 172 aa5.47□□□□□ -1.53
CTNND1-205ENST00000399050 Q8NDZ9 215 aa5.47□□□□□ -1.53
CTNND1-205ENST00000399050 C5orf42Q9H799 3197 aa5.47□□□□□ -1.53
CTNND1-205ENST00000399050 PSORS1C2Q9UIG4 136 aa5.47□□□□□ -1.53
CTNND1-205ENST00000399050 Q8N9P0 234 aaPredicted RBP5.46□□□□□ -1.53
CTNND1-205ENST00000399050 LINC00304Q8N9R0 145 aa5.46□□□□□ -1.53
CTNND1-205ENST00000399050 ANKRD11Q6UB99 2663 aaPredicted RBP5.46□□□□□ -1.53
CTNND1-205ENST00000399050 A0A087WTM6 91 aa5.46□□□□□ -1.54
CTNND1-205ENST00000399050 H3BS24 57 aa5.46□□□□□ -1.54
CTNND1-205ENST00000399050 K7EIL1 84 aa5.46□□□□□ -1.54
CTNND1-205ENST00000399050 IGLV7-43P04211 117 aa5.46□□□□□ -1.54
CTNND1-205ENST00000399050 CR1P17927 2039 aa5.46□□□□□ -1.54
CTNND1-205ENST00000399050 PCNTO95613 3336 aa5.45□□□□□ -1.54
CTNND1-205ENST00000399050 SETD2Q9BYW2 2564 aaPredicted RBP5.45□□□□□ -1.54
CTNND1-205ENST00000399050 Q5VV11 94 aa5.45□□□□□ -1.54
CTNND1-205ENST00000399050 LINC01558Q9Y6Z2 57 aa5.44□□□□□ -1.54
CTNND1-205ENST00000399050 PKD1L2Q7Z442 2459 aa5.43□□□□□ -1.54
CTNND1-205ENST00000399050 USP9YO00507 2555 aaPredicted RBP5.43□□□□□ -1.54
CTNND1-205ENST00000399050 J3QL48 77 aa5.42□□□□□ -1.54
CTNND1-205ENST00000399050 PRAC1Q96KF2 57 aa5.42□□□□□ -1.54
CTNND1-205ENST00000399050 HRES1P13985 223 aa5.41□□□□□ -1.54
CTNND1-205ENST00000399050 JMJD1CQ15652 2540 aa5.41□□□□□ -1.54
CTNND1-205ENST00000399050 MMP24-AS1A0A0U1RRL7 71 aa5.41□□□□□ -1.54
CTNND1-205ENST00000399050 KRTAP1-3Q8IUG1 177 aa5.4□□□□□ -1.55
CTNND1-205ENST00000399050 CEP295Q9C0D2 2601 aa5.39□□□□□ -1.55
CTNND1-205ENST00000399050 ZFYVE26Q68DK2 2539 aa5.38□□□□□ -1.55
CTNND1-205ENST00000399050 SPINK7P58062 85 aa5.38□□□□□ -1.55
CTNND1-205ENST00000399050 A0A0C4DFX4 3053 aa5.38□□□□□ -1.55
CTNND1-205ENST00000399050 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
CTNND1-205ENST00000399050 PRRC2CQ9Y520 2896 aaKnown RBP5.36□□□□□ -1.55
CTNND1-205ENST00000399050 SPRR1AP35321 89 aa5.36□□□□□ -1.55
CTNND1-205ENST00000399050 A0A1B0GU33 70 aa5.36□□□□□ -1.55
CTNND1-205ENST00000399050 POLQO75417 2590 aa5.35□□□□□ -1.55
CTNND1-205ENST00000399050 KRTAP1-1Q07627 177 aa5.35□□□□□ -1.55
CTNND1-205ENST00000399050 WWC2-AS2Q96NR7 200 aa5.35□□□□□ -1.55
CTNND1-205ENST00000399050 CSAG1Q6PB30 78 aa5.34□□□□□ -1.55
CTNND1-205ENST00000399050 PIEZO1Q92508 2521 aa5.33□□□□□ -1.56
CTNND1-205ENST00000399050 SMR3BP02814 79 aaPredicted RBP5.33□□□□□ -1.56
CTNND1-205ENST00000399050 ZNF462Q96JM2 2506 aa5.33□□□□□ -1.56
CTNND1-205ENST00000399050 LINC00472Q9H8W2 130 aa5.33□□□□□ -1.56
CTNND1-205ENST00000399050 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.33□□□□□ -1.56
CTNND1-205ENST00000399050 MTORP42345 2549 aa5.32□□□□□ -1.56
CTNND1-205ENST00000399050 F8P00451 2351 aa5.32□□□□□ -1.56
CTNND1-205ENST00000399050 CHD7Q9P2D1 2997 aa5.31□□□□□ -1.56
CTNND1-205ENST00000399050 CHD8Q9HCK8 2581 aa5.31□□□□□ -1.56
CTNND1-205ENST00000399050 Q5W150 140 aa5.29□□□□□ -1.56
CTNND1-205ENST00000399050 ACANP16112 2415 aa5.29□□□□□ -1.56
CTNND1-205ENST00000399050 SPTBN4Q9H254 2564 aa5.29□□□□□ -1.56
CTNND1-205ENST00000399050 SPRR1BP22528 89 aa5.27□□□□□ -1.57
CTNND1-205ENST00000399050 KRTAP26-1Q6PEX3 210 aa5.26□□□□□ -1.57
CTNND1-205ENST00000399050 ZCCHC13Q8WW36 166 aaKnown RBP5.26□□□□□ -1.57
CTNND1-205ENST00000399050 DMAC1Q96GE9 116 aa5.25□□□□□ -1.57
CTNND1-205ENST00000399050 TNP2Q05952 138 aa5.25□□□□□ -1.57
CTNND1-205ENST00000399050 PLAC4Q8WY50 150 aa5.24□□□□□ -1.57
CTNND1-205ENST00000399050 MKI67P46013 3256 aaKnown RBP5.24□□□□□ -1.57
CTNND1-205ENST00000399050 CFAP54Q96N23 3096 aa5.23□□□□□ -1.57
CTNND1-205ENST00000399050 PLAC8Q9NZF1 115 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms