RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 USP9XQ93008 2570 aaPredicted RBP7.68□□□□□ -1.18
TMF1-201ENST00000398559 GIG44P09565 113 aaPredicted RBP7.68□□□□□ -1.18
TMF1-201ENST00000398559 LINC00304Q8N9R0 145 aa7.68□□□□□ -1.18
TMF1-201ENST00000398559 ZFYVE26Q68DK2 2539 aa7.68□□□□□ -1.18
TMF1-201ENST00000398559 LCA10Q71F78 164 aa7.67□□□□□ -1.18
TMF1-201ENST00000398559 TLX1NBP0CAT3 122 aa7.67□□□□□ -1.18
TMF1-201ENST00000398559 A0A1W2PNM2 257 aa7.65□□□□□ -1.19
TMF1-201ENST00000398559 WWC2-AS2Q96NR7 200 aa7.64□□□□□ -1.19
TMF1-201ENST00000398559 SPANXA2-OT1Q8N9U9 137 aa7.63□□□□□ -1.19
TMF1-201ENST00000398559 CENPFP49454 3210 aa7.63□□□□□ -1.19
TMF1-201ENST00000398559 C19orf73Q9NVV2 129 aa7.63□□□□□ -1.19
TMF1-201ENST00000398559 LINC00612Q8N6U2 182 aa7.63□□□□□ -1.19
TMF1-201ENST00000398559 SETD2Q9BYW2 2564 aaPredicted RBP7.62□□□□□ -1.19
TMF1-201ENST00000398559 COX6B2Q6YFQ2 88 aa7.62□□□□□ -1.19
TMF1-201ENST00000398559 K7EIL1 84 aa7.62□□□□□ -1.19
TMF1-201ENST00000398559 PIEZO1Q92508 2521 aa7.62□□□□□ -1.19
TMF1-201ENST00000398559 KRTAP10-3P60369 221 aa7.61□□□□□ -1.19
TMF1-201ENST00000398559 CDC42SE1Q9NRR8 79 aa7.61□□□□□ -1.19
TMF1-201ENST00000398559 A0A087WTM6 91 aa7.61□□□□□ -1.19
TMF1-201ENST00000398559 A0A0D9SG42 100 aa7.61□□□□□ -1.19
TMF1-201ENST00000398559 FAM104AQ969W3 186 aa7.61□□□□□ -1.19
TMF1-201ENST00000398559 PKD1L2Q7Z442 2459 aa7.6□□□□□ -1.19
TMF1-201ENST00000398559 J3QL48 77 aa7.6□□□□□ -1.19
TMF1-201ENST00000398559 CASC10Q5T4H9 136 aa7.6□□□□□ -1.19
TMF1-201ENST00000398559 Q8N1X5 172 aa7.6□□□□□ -1.19
TMF1-201ENST00000398559 C9orf163Q8N9P6 203 aa7.6□□□□□ -1.19
TMF1-201ENST00000398559 SPRR4Q96PI1 79 aa7.59□□□□□ -1.19
TMF1-201ENST00000398559 IGLV7-43P04211 117 aa7.59□□□□□ -1.19
TMF1-201ENST00000398559 PSORS1C2Q9UIG4 136 aa7.58□□□□□ -1.2
TMF1-201ENST00000398559 IGLV5-37A0A075B6J1 123 aa7.57□□□□□ -1.2
TMF1-201ENST00000398559 IGLV5-48A0A075B6I7 105 aa7.57□□□□□ -1.2
TMF1-201ENST00000398559 ANKRD17O75179 2603 aaKnown RBP7.57□□□□□ -1.2
TMF1-201ENST00000398559 SMR3BP02814 79 aaPredicted RBP7.56□□□□□ -1.2
TMF1-201ENST00000398559 ANKRD11Q6UB99 2663 aaPredicted RBP7.55□□□□□ -1.2
TMF1-201ENST00000398559 LINC01554Q52M75 96 aa7.55□□□□□ -1.2
TMF1-201ENST00000398559 Q1T7F1 81 aa7.55□□□□□ -1.2
TMF1-201ENST00000398559 OCR1Q9BZK8 76 aa7.54□□□□□ -1.2
TMF1-201ENST00000398559 A0A096LNT2 108 aa7.54□□□□□ -1.2
TMF1-201ENST00000398559 USP9YO00507 2555 aaPredicted RBP7.54□□□□□ -1.2
TMF1-201ENST00000398559 CNBPP62633 177 aaKnown RBP7.52□□□□□ -1.21
TMF1-201ENST00000398559 RBM12B-AS1Q9P1G2 102 aa7.51□□□□□ -1.21
TMF1-201ENST00000398559 ZNF462Q96JM2 2506 aa7.51□□□□□ -1.21
TMF1-201ENST00000398559 PRR26Q8N8Z3 221 aa7.51□□□□□ -1.21
TMF1-201ENST00000398559 ZNF575Q86XF7 245 aa7.48□□□□□ -1.21
TMF1-201ENST00000398559 CEP295Q9C0D2 2601 aa7.45□□□□□ -1.22
TMF1-201ENST00000398559 IGLV7-46A0A075B6I9 117 aa7.45□□□□□ -1.22
TMF1-201ENST00000398559 MTORP42345 2549 aa7.44□□□□□ -1.22
TMF1-201ENST00000398559 FAM229BQ4G0N7 80 aa7.44□□□□□ -1.22
TMF1-201ENST00000398559 CR1P17927 2039 aa7.44□□□□□ -1.22
TMF1-201ENST00000398559 WIPF1O43516 503 aa7.43□□□□□ -1.22
TMF1-201ENST00000398559 Q75L30 129 aa7.43□□□□□ -1.22
TMF1-201ENST00000398559 F8P00451 2351 aa7.43□□□□□ -1.22
TMF1-201ENST00000398559 LUZP6Q538Z0 58 aa7.42□□□□□ -1.22
TMF1-201ENST00000398559 POLQO75417 2590 aa7.41□□□□□ -1.22
TMF1-201ENST00000398559 HRES1P13985 223 aa7.41□□□□□ -1.22
TMF1-201ENST00000398559 GOLGB1Q14789 3259 aaKnown RBP7.4□□□□□ -1.23
TMF1-201ENST00000398559 Q5XG85 94 aa7.4□□□□□ -1.23
TMF1-201ENST00000398559 A0A1B0GU33 70 aa7.4□□□□□ -1.23
TMF1-201ENST00000398559 SPTBN4Q9H254 2564 aa7.39□□□□□ -1.23
TMF1-201ENST00000398559 ACANP16112 2415 aa7.39□□□□□ -1.23
TMF1-201ENST00000398559 CYSTM1Q9H1C7 97 aa7.37□□□□□ -1.23
TMF1-201ENST00000398559 KRTAP1-3Q8IUG1 177 aa7.36□□□□□ -1.23
TMF1-201ENST00000398559 CHD8Q9HCK8 2581 aa7.36□□□□□ -1.23
TMF1-201ENST00000398559 LINC01558Q9Y6Z2 57 aa7.35□□□□□ -1.23
TMF1-201ENST00000398559 Q8N9P0 234 aaPredicted RBP7.34□□□□□ -1.23
TMF1-201ENST00000398559 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.34□□□□□ -1.23
TMF1-201ENST00000398559 MMP24-AS1A0A0U1RRL7 71 aa7.34□□□□□ -1.24
TMF1-201ENST00000398559 FP248Q71RG6 208 aaPredicted RBP7.34□□□□□ -1.24
TMF1-201ENST00000398559 PRAC1Q96KF2 57 aa7.32□□□□□ -1.24
TMF1-201ENST00000398559 TNP2Q05952 138 aa7.32□□□□□ -1.24
TMF1-201ENST00000398559 Q6ZSA8 131 aa7.31□□□□□ -1.24
TMF1-201ENST00000398559 Q8NDZ9 215 aa7.31□□□□□ -1.24
TMF1-201ENST00000398559 KRTAP1-1Q07627 177 aa7.31□□□□□ -1.24
TMF1-201ENST00000398559 CAMK2N1Q7Z7J9 78 aa7.3□□□□□ -1.24
TMF1-201ENST00000398559 Q5VV11 94 aa7.29□□□□□ -1.24
TMF1-201ENST00000398559 LINC00483Q53H64 154 aa7.27□□□□□ -1.25
TMF1-201ENST00000398559 ZCCHC13Q8WW36 166 aaKnown RBP7.26□□□□□ -1.25
TMF1-201ENST00000398559 DMAC1Q96GE9 116 aa7.25□□□□□ -1.25
TMF1-201ENST00000398559 SPINK7P58062 85 aa7.25□□□□□ -1.25
TMF1-201ENST00000398559 CSAG1Q6PB30 78 aa7.25□□□□□ -1.25
TMF1-201ENST00000398559 DNAH12Q6ZR08 3092 aa7.24□□□□□ -1.25
TMF1-201ENST00000398559 H3BS24 57 aa7.24□□□□□ -1.25
TMF1-201ENST00000398559 Q5W150 140 aa7.24□□□□□ -1.25
TMF1-201ENST00000398559 SPRR1AP35321 89 aa7.24□□□□□ -1.25
TMF1-201ENST00000398559 S4R3F8 94 aa7.23□□□□□ -1.25
TMF1-201ENST00000398559 LINC00472Q9H8W2 130 aa7.21□□□□□ -1.26
TMF1-201ENST00000398559 PLAC8Q9NZF1 115 aa7.2□□□□□ -1.26
TMF1-201ENST00000398559 FASNP49327 2511 aaKnown RBP7.18□□□□□ -1.26
TMF1-201ENST00000398559 BPTFQ12830 3046 aa7.18□□□□□ -1.26
TMF1-201ENST00000398559 OXTP01178 125 aa7.18□□□□□ -1.26
TMF1-201ENST00000398559 SPRR1BP22528 89 aa7.15□□□□□ -1.27
TMF1-201ENST00000398559 M0R2T5 61 aa7.14□□□□□ -1.27
TMF1-201ENST00000398559 PRRC2CQ9Y520 2896 aaKnown RBP7.13□□□□□ -1.27
TMF1-201ENST00000398559 KRTAP26-1Q6PEX3 210 aa7.12□□□□□ -1.27
TMF1-201ENST00000398559 USP24Q9UPU5 2620 aa7.1□□□□□ -1.27
TMF1-201ENST00000398559 A0A0A0MQY5 61 aa7.1□□□□□ -1.27
TMF1-201ENST00000398559 R4GN34 69 aa7.08□□□□□ -1.28
TMF1-201ENST00000398559 ROMO1P60602 79 aa7.08□□□□□ -1.28
TMF1-201ENST00000398559 RPL37P61927 97 aaKnown RBP7.06□□□□□ -1.28
TMF1-201ENST00000398559 H1FX-AS1Q4G0G2 97 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 499 ms