RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 TRBV10-3A0A0K0K1G6 114 aa8.99□□□□□ -0.97
SKA1-202ENST00000398452 Q8NDZ9 215 aa8.99□□□□□ -0.97
SKA1-202ENST00000398452 LINC00167Q96N53 147 aa8.99□□□□□ -0.97
SKA1-202ENST00000398452 PCLOQ9Y6V0 5065 aa8.98□□□□□ -0.97
SKA1-202ENST00000398452 TRAV23DV6A0A075B6W5 121 aa8.98□□□□□ -0.97
SKA1-202ENST00000398452 PANO1I0J062 215 aa8.98□□□□□ -0.97
SKA1-202ENST00000398452 COX6CP09669 75 aa8.98□□□□□ -0.97
SKA1-202ENST00000398452 C21orf62-AS1Q17RA5 79 aa8.98□□□□□ -0.97
SKA1-202ENST00000398452 KRTAP4-5Q9BYR2 181 aa8.98□□□□□ -0.97
SKA1-202ENST00000398452 PLAC8Q9NZF1 115 aa8.98□□□□□ -0.97
SKA1-202ENST00000398452 PKD1P98161 4303 aa8.98□□□□□ -0.97
SKA1-202ENST00000398452 RPL37AP8A6NKH3 93 aa8.97□□□□□ -0.97
SKA1-202ENST00000398452 IGLV6-57P01721 117 aa8.97□□□□□ -0.97
SKA1-202ENST00000398452 VAMP3Q15836 100 aa8.97□□□□□ -0.97
SKA1-202ENST00000398452 LYRM7Q5U5X0 104 aa8.97□□□□□ -0.97
SKA1-202ENST00000398452 PHF5AQ7RTV0 110 aaKnown RBP8.97□□□□□ -0.97
SKA1-202ENST00000398452 DNAH11Q96DT5 4516 aa8.97□□□□□ -0.97
SKA1-202ENST00000398452 DYNC1H1Q14204 4646 aaKnown RBP8.96□□□□□ -0.97
SKA1-202ENST00000398452 SCGB1C2P0DMR2 95 aa8.96□□□□□ -0.98
SKA1-202ENST00000398452 IGLV1-50A0A075B6I6 118 aa8.95□□□□□ -0.98
SKA1-202ENST00000398452 PRYO14603 147 aa8.95□□□□□ -0.98
SKA1-202ENST00000398452 TSPAN13O95857 204 aa8.95□□□□□ -0.98
SKA1-202ENST00000398452 DIRC1Q969H9 104 aa8.95□□□□□ -0.98
SKA1-202ENST00000398452 C9orf118A6NHY6 69 aa8.94□□□□□ -0.98
SKA1-202ENST00000398452 RPL28P46779 137 aaKnown RBP8.94□□□□□ -0.98
SKA1-202ENST00000398452 Q6ZSA8 131 aa8.94□□□□□ -0.98
SKA1-202ENST00000398452 SCXQ7RTU7 201 aa8.94□□□□□ -0.98
SKA1-202ENST00000398452 KRTAP7-1Q8IUC3 87 aa8.94□□□□□ -0.98
SKA1-202ENST00000398452 CIRBP-AS1Q8TBR5 109 aa8.94□□□□□ -0.98
SKA1-202ENST00000398452 SMIM11BQ8TCY0 68 aa8.94□□□□□ -0.98
SKA1-202ENST00000398452 FAM30AQ9NZY2 134 aa8.94□□□□□ -0.98
SKA1-202ENST00000398452 H3BUT2 72 aa8.93□□□□□ -0.98
SKA1-202ENST00000398452 TAX1BP3O14907 124 aa8.93□□□□□ -0.98
SKA1-202ENST00000398452 ZNF73O43830 326 aaPredicted RBP8.93□□□□□ -0.98
SKA1-202ENST00000398452 SNCGO76070 127 aa8.93□□□□□ -0.98
SKA1-202ENST00000398452 REG3GQ6UW15 175 aa8.93□□□□□ -0.98
SKA1-202ENST00000398452 ETDCA0A1B0GVM5 59 aa8.92□□□□□ -0.98
SKA1-202ENST00000398452 C6orf99Q4VX62 202 aa8.92□□□□□ -0.98
SKA1-202ENST00000398452 KCNQ1DNQ9H478 68 aa8.92□□□□□ -0.98
SKA1-202ENST00000398452 EPM2AB3EWF7 344 aa8.91□□□□□ -0.98
SKA1-202ENST00000398452 RYR1P21817 5038 aa8.9□□□□□ -0.98
SKA1-202ENST00000398452 H0YGX0 51 aa8.9□□□□□ -0.98
SKA1-202ENST00000398452 FABP2P12104 132 aa8.9□□□□□ -0.98
SKA1-202ENST00000398452 NAA38Q9BRA0 125 aaKnown RBP8.9□□□□□ -0.98
SKA1-202ENST00000398452 KRTAP4-9Q9BYQ8 210 aa8.9□□□□□ -0.98
SKA1-202ENST00000398452 TRIAP1O43715 76 aa8.89□□□□□ -0.99
SKA1-202ENST00000398452 COX7BP24311 80 aa8.89□□□□□ -0.99
SKA1-202ENST00000398452 SLC25A20O43772 301 aa8.88□□□□□ -0.99
SKA1-202ENST00000398452 KRTAP19-4Q3LI73 84 aa8.88□□□□□ -0.99
SKA1-202ENST00000398452 FAM19A1Q7Z5A9 133 aa8.88□□□□□ -0.99
SKA1-202ENST00000398452 TRBV7-6A0A0J9YX20 115 aa8.87□□□□□ -0.99
SKA1-202ENST00000398452 A0A1W2PPM0 123 aa8.87□□□□□ -0.99
SKA1-202ENST00000398452 CDK2AP2O75956 126 aa8.87□□□□□ -0.99
SKA1-202ENST00000398452 UBE2AP49459 152 aa8.87□□□□□ -0.99
SKA1-202ENST00000398452 HAMPP81172 84 aa8.87□□□□□ -0.99
SKA1-202ENST00000398452 DNAH5Q8TE73 4624 aa8.86□□□□□ -0.99
SKA1-202ENST00000398452 ABCA13Q86UQ4 5058 aa8.85□□□□□ -0.99
SKA1-202ENST00000398452 TRBV20-1A0A075B6N2 111 aa8.85□□□□□ -0.99
SKA1-202ENST00000398452 C1orf137Q5JT78 98 aa8.85□□□□□ -0.99
SKA1-202ENST00000398452 BCE1O60756 84 aa8.84□□□□□ -0.99
SKA1-202ENST00000398452 SPRR1AP35321 89 aa8.84□□□□□ -0.99
SKA1-202ENST00000398452 HSPG2P98160 4391 aa8.84□□□□□ -0.99
SKA1-202ENST00000398452 DNAL4O96015 105 aa8.83□□□□□ -1
SKA1-202ENST00000398452 ELOF1P60002 83 aaKnown RBP8.83□□□□□ -1
SKA1-202ENST00000398452 ATXN8Q156A1 80 aa8.83□□□□□ -1
SKA1-202ENST00000398452 PSORS1C2Q9UIG4 136 aa8.83□□□□□ -1
SKA1-202ENST00000398452 SPCS1Q9Y6A9 102 aa8.83□□□□□ -1
SKA1-202ENST00000398452 LRP1BQ9NZR2 4599 aa8.82□□□□□ -1
SKA1-202ENST00000398452 GTF2H5Q6ZYL4 71 aa8.82□□□□□ -1
SKA1-202ENST00000398452 DHRS4-AS1Q9P1J3 65 aa8.82□□□□□ -1
SKA1-202ENST00000398452 A0A1B0GX51 115 aa8.81□□□□□ -1
SKA1-202ENST00000398452 B5MCH6 92 aa8.81□□□□□ -1
SKA1-202ENST00000398452 INAFM2P0DMQ5 153 aa8.81□□□□□ -1
SKA1-202ENST00000398452 LCE4AQ5TA78 99 aa8.81□□□□□ -1
SKA1-202ENST00000398452 Q6ZRX8 168 aa8.81□□□□□ -1
SKA1-202ENST00000398452 Q8N1X5 172 aa8.81□□□□□ -1
SKA1-202ENST00000398452 CLEC2BQ92478 149 aa8.81□□□□□ -1
SKA1-202ENST00000398452 hADV29S1A0JD25 119 aa8.8□□□□□ -1
SKA1-202ENST00000398452 XGP55808 180 aa8.8□□□□□ -1
SKA1-202ENST00000398452 PRLHP81277 87 aa8.8□□□□□ -1
SKA1-202ENST00000398452 KRTAP11-1Q8IUC1 163 aa8.8□□□□□ -1
SKA1-202ENST00000398452 LINC00575Q6W349 94 aa8.79□□□□□ -1
SKA1-202ENST00000398452 HIGD2AQ9BW72 106 aa8.79□□□□□ -1
SKA1-202ENST00000398452 KRTAP4-16G5E9R7 235 aaPredicted RBP8.78□□□□□ -1
SKA1-202ENST00000398452 H0Y9J4 135 aa8.78□□□□□ -1
SKA1-202ENST00000398452 LST1O00453 97 aa8.78□□□□□ -1
SKA1-202ENST00000398452 TCL1BO95988 128 aa8.78□□□□□ -1
SKA1-202ENST00000398452 RPL37AP61513 92 aaKnown RBP8.78□□□□□ -1
SKA1-202ENST00000398452 DNAH8Q96JB1 4490 aa8.78□□□□□ -1
SKA1-202ENST00000398452 TRACP01848 142 aa8.77□□□□□ -1.01
SKA1-202ENST00000398452 SMR3BP02814 79 aaPredicted RBP8.77□□□□□ -1.01
SKA1-202ENST00000398452 K7EP34 96 aa8.76□□□□□ -1.01
SKA1-202ENST00000398452 IGLV7-43P04211 117 aa8.76□□□□□ -1.01
SKA1-202ENST00000398452 A0A1B0GV90 55 aa8.75□□□□□ -1.01
SKA1-202ENST00000398452 ZNF861PO60384 105 aa8.75□□□□□ -1.01
SKA1-202ENST00000398452 PLA2G1BP04054 148 aaKnown RBP8.74□□□□□ -1.01
SKA1-202ENST00000398452 OCIAD2Q56VL3 154 aa8.74□□□□□ -1.01
SKA1-202ENST00000398452 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.74□□□□□ -1.01
SKA1-202ENST00000398452 FAM218AQ96MZ4 157 aa8.74□□□□□ -1.01
SKA1-202ENST00000398452 APOBP04114 4563 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms