RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 DEFB114Q30KQ6 69 aa0.56□□□□□ -2.32
HMGN2P39-201ENST00000398005 DEFB109BQ30KR1 87 aa0.56□□□□□ -2.32
HMGN2P39-201ENST00000398005 NCBP2-AS2Q69YL0 99 aa0.56□□□□□ -2.32
HMGN2P39-201ENST00000398005 UGGT1Q9NYU2 1555 aa0.55□□□□□ -2.32
HMGN2P39-201ENST00000398005 M0R1W7 72 aa0.55□□□□□ -2.32
HMGN2P39-201ENST00000398005 CRIP1P50238 77 aa0.55□□□□□ -2.32
HMGN2P39-201ENST00000398005 SERF2P84101 59 aa0.55□□□□□ -2.32
HMGN2P39-201ENST00000398005 NMES1Q9C002 83 aa0.55□□□□□ -2.32
HMGN2P39-201ENST00000398005 TJP1Q07157 1748 aa0.55□□□□□ -2.32
HMGN2P39-201ENST00000398005 K7EMI3 77 aa0.54□□□□□ -2.32
HMGN2P39-201ENST00000398005 NAV3Q8IVL0 2385 aa0.54□□□□□ -2.32
HMGN2P39-201ENST00000398005 FAM208BQ5VWN6 2430 aa0.54□□□□□ -2.32
HMGN2P39-201ENST00000398005 MUC6Q6W4X9 2439 aa0.54□□□□□ -2.32
HMGN2P39-201ENST00000398005 C3P01024 1663 aa0.53□□□□□ -2.32
HMGN2P39-201ENST00000398005 KRTAP4-1Q9BYQ7 146 aa0.53□□□□□ -2.32
HMGN2P39-201ENST00000398005 CRCT1Q9UGL9 99 aa0.53□□□□□ -2.32
HMGN2P39-201ENST00000398005 MEGF8Q7Z7M0 2845 aa0.53□□□□□ -2.32
HMGN2P39-201ENST00000398005 MAST1Q9Y2H9 1570 aa0.53□□□□□ -2.33
HMGN2P39-201ENST00000398005 RNF17Q9BXT8 1623 aaKnown RBP0.53□□□□□ -2.33
HMGN2P39-201ENST00000398005 C4AP0C0L4 1744 aa0.52□□□□□ -2.33
HMGN2P39-201ENST00000398005 C4BP0C0L5 1744 aa0.52□□□□□ -2.33
HMGN2P39-201ENST00000398005 SPINK1P00995 79 aa0.52□□□□□ -2.33
HMGN2P39-201ENST00000398005 SYCP2Q9BX26 1530 aa0.52□□□□□ -2.33
HMGN2P39-201ENST00000398005 CROCC2H7BZ55 1655 aa0.52□□□□□ -2.33
HMGN2P39-201ENST00000398005 URB1O60287 2271 aaKnown RBP0.52□□□□□ -2.33
HMGN2P39-201ENST00000398005 AHNAK2Q8IVF2 5795 aa0.51□□□□□ -2.33
HMGN2P39-201ENST00000398005 MROH2AA6NES4 1674 aa0.51□□□□□ -2.33
HMGN2P39-201ENST00000398005 H0YAA0 97 aa0.51□□□□□ -2.33
HMGN2P39-201ENST00000398005 LY75O60449 1722 aa0.51□□□□□ -2.33
HMGN2P39-201ENST00000398005 ITSN2Q9NZM3 1697 aa0.51□□□□□ -2.33
HMGN2P39-201ENST00000398005 AHCTF1Q8WYP5 2266 aa0.5□□□□□ -2.33
HMGN2P39-201ENST00000398005 GOLGA4Q13439 2230 aaKnown RBP0.5□□□□□ -2.33
HMGN2P39-201ENST00000398005 KRTAP19-3Q7Z4W3 81 aa0.5□□□□□ -2.33
HMGN2P39-201ENST00000398005 TENM1Q9UKZ4 2725 aa0.5□□□□□ -2.33
HMGN2P39-201ENST00000398005 KIF1AQ12756 1690 aa0.49□□□□□ -2.33
HMGN2P39-201ENST00000398005 DEPDC5O75140 1603 aa0.49□□□□□ -2.33
HMGN2P39-201ENST00000398005 KIAA0586Q9BVV6 1533 aa0.49□□□□□ -2.33
HMGN2P39-201ENST00000398005 FANCD2Q9BXW9 1451 aa0.49□□□□□ -2.33
HMGN2P39-201ENST00000398005 HELZ2Q9BYK8 2649 aaKnown RBP0.49□□□□□ -2.33
HMGN2P39-201ENST00000398005 IGIPA6NJ69 53 aa0.49□□□□□ -2.33
HMGN2P39-201ENST00000398005 SNRPGP15A8MWD9 76 aa0.49□□□□□ -2.33
HMGN2P39-201ENST00000398005 LOC730098B7Z3J9 87 aa0.49□□□□□ -2.33
HMGN2P39-201ENST00000398005 LYNX1G3V0Z9 82 aa0.49□□□□□ -2.33
HMGN2P39-201ENST00000398005 IAPPP10997 89 aa0.49□□□□□ -2.33
HMGN2P39-201ENST00000398005 MINOS1Q5TGZ0 78 aa0.49□□□□□ -2.33
HMGN2P39-201ENST00000398005 USF3Q68DE3 2245 aa0.48□□□□□ -2.33
HMGN2P39-201ENST00000398005 PRH1P02810 166 aa0.48□□□□□ -2.33
HMGN2P39-201ENST00000398005 DEFB130BP0DP73 79 aa0.48□□□□□ -2.33
HMGN2P39-201ENST00000398005 DEFB130AP0DP74 79 aa0.48□□□□□ -2.33
HMGN2P39-201ENST00000398005 PLNP26678 52 aa0.48□□□□□ -2.33
HMGN2P39-201ENST00000398005 ADCY10Q96PN6 1610 aa0.48□□□□□ -2.33
HMGN2P39-201ENST00000398005 CACNA1EQ15878 2313 aa0.48□□□□□ -2.33
HMGN2P39-201ENST00000398005 ANKRD17O75179 2603 aaKnown RBP0.47□□□□□ -2.33
HMGN2P39-201ENST00000398005 KRTAP2-3P0C7H8 128 aa0.47□□□□□ -2.33
HMGN2P39-201ENST00000398005 SMR3AQ99954 134 aa0.47□□□□□ -2.33
HMGN2P39-201ENST00000398005 KRTAP2-4Q9BYR9 128 aa0.47□□□□□ -2.33
HMGN2P39-201ENST00000398005 KRTAP2-1Q9BYU5 128 aa0.47□□□□□ -2.33
HMGN2P39-201ENST00000398005 CMC2Q9NRP2 79 aa0.47□□□□□ -2.33
HMGN2P39-201ENST00000398005 C6orf48Q9UBA6 75 aa0.47□□□□□ -2.33
HMGN2P39-201ENST00000398005 U3KQA8 63 aa0.47□□□□□ -2.33
HMGN2P39-201ENST00000398005 ZNF462Q96JM2 2506 aa0.47□□□□□ -2.33
HMGN2P39-201ENST00000398005 TTC28Q96AY4 2481 aa0.46□□□□□ -2.34
HMGN2P39-201ENST00000398005 PTPRQQ9UMZ3 2332 aa0.46□□□□□ -2.34
HMGN2P39-201ENST00000398005 H0YGX0 51 aa0.46□□□□□ -2.34
HMGN2P39-201ENST00000398005 TMEM167BQ9NRX6 74 aa0.46□□□□□ -2.34
HMGN2P39-201ENST00000398005 CLASP1Q7Z460 1538 aa0.46□□□□□ -2.34
HMGN2P39-201ENST00000398005 EFCAB6Q5THR3 1501 aa0.45□□□□□ -2.34
HMGN2P39-201ENST00000398005 TNCP24821 2201 aa0.45□□□□□ -2.34
HMGN2P39-201ENST00000398005 PLCE1Q9P212 2302 aa0.44□□□□□ -2.34
HMGN2P39-201ENST00000398005 AGLP35573 1532 aa0.44□□□□□ -2.34
HMGN2P39-201ENST00000398005 DOPEY2Q9Y3R5 2298 aa0.44□□□□□ -2.34
HMGN2P39-201ENST00000398005 PIEZO2Q9H5I5 2752 aa0.44□□□□□ -2.34
HMGN2P39-201ENST00000398005 LINC00308Q8TCZ7 52 aa0.44□□□□□ -2.34
HMGN2P39-201ENST00000398005 TIMM8BQ9Y5J9 83 aaPredicted RBP0.44□□□□□ -2.34
HMGN2P39-201ENST00000398005 ABCC8Q09428 1581 aa0.44□□□□□ -2.34
HMGN2P39-201ENST00000398005 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.43□□□□□ -2.34
HMGN2P39-201ENST00000398005 ANKRD36CQ5JPF3 1778 aa0.43□□□□□ -2.34
HMGN2P39-201ENST00000398005 H0YGG7 62 aa0.43□□□□□ -2.34
HMGN2P39-201ENST00000398005 RPS27P42677 84 aaKnown RBP0.43□□□□□ -2.34
HMGN2P39-201ENST00000398005 DEFB135Q30KP9 77 aa0.43□□□□□ -2.34
HMGN2P39-201ENST00000398005 RPS27LQ71UM5 84 aaKnown RBP0.43□□□□□ -2.34
HMGN2P39-201ENST00000398005 CACNA1HO95180 2353 aa0.43□□□□□ -2.34
HMGN2P39-201ENST00000398005 TOGARAM1Q9Y4F4 1720 aa0.43□□□□□ -2.34
HMGN2P39-201ENST00000398005 CELSR2Q9HCU4 2923 aa0.42□□□□□ -2.34
HMGN2P39-201ENST00000398005 PTPRZ1P23471 2315 aaPredicted RBP0.42□□□□□ -2.34
HMGN2P39-201ENST00000398005 GPR98Q8WXG9 6306 aa0.42□□□□□ -2.34
HMGN2P39-201ENST00000398005 M0R2T5 61 aa0.42□□□□□ -2.34
HMGN2P39-201ENST00000398005 WT1-ASQ06250 92 aa0.42□□□□□ -2.34
HMGN2P39-201ENST00000398005 ABCA5Q8WWZ7 1642 aa0.42□□□□□ -2.34
HMGN2P39-201ENST00000398005 NRXN3Q9Y4C0 1643 aa0.42□□□□□ -2.34
HMGN2P39-201ENST00000398005 CDC42BPAQ5VT25 1732 aa0.41□□□□□ -2.34
HMGN2P39-201ENST00000398005 C2CD3Q4AC94 2353 aa0.41□□□□□ -2.34
HMGN2P39-201ENST00000398005 TOMM5Q8N4H5 51 aa0.41□□□□□ -2.34
HMGN2P39-201ENST00000398005 ABRACLQ9P1F3 81 aa0.41□□□□□ -2.34
HMGN2P39-201ENST00000398005 FRAS1Q86XX4 4008 aa0.41□□□□□ -2.34
HMGN2P39-201ENST00000398005 SMIM27A0A1W2PRY6 76 aa0.4□□□□□ -2.35
HMGN2P39-201ENST00000398005 DEFB106AQ8N104 65 aa0.4□□□□□ -2.35
HMGN2P39-201ENST00000398005 S4R3F8 94 aa0.4□□□□□ -2.35
HMGN2P39-201ENST00000398005 SPTBN2O15020 2390 aa0.4□□□□□ -2.35
HMGN2P39-201ENST00000398005 FBN2P35556 2912 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms