RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 LINC00158P58513 81 aa4.91□□□□□ -1.62
CAPN3-208ENST00000397204 SMCR5Q8TEV8 140 aa4.91□□□□□ -1.62
CAPN3-208ENST00000397204 KRTAP4-1Q9BYQ7 146 aa4.91□□□□□ -1.62
CAPN3-208ENST00000397204 K7ERU9 68 aa4.9□□□□□ -1.63
CAPN3-208ENST00000397204 RPS29P62273 56 aaKnown RBP4.9□□□□□ -1.63
CAPN3-208ENST00000397204 FABP9Q0Z7S8 132 aa4.9□□□□□ -1.63
CAPN3-208ENST00000397204 SSBP3-AS1Q7Z2R9 100 aa4.9□□□□□ -1.63
CAPN3-208ENST00000397204 BAGE3Q86Y29 109 aa4.9□□□□□ -1.63
CAPN3-208ENST00000397204 SMIM20Q8N5G0 67 aa4.9□□□□□ -1.63
CAPN3-208ENST00000397204 KCNQ1DNQ9H478 68 aa4.9□□□□□ -1.63
CAPN3-208ENST00000397204 CRCT1Q9UGL9 99 aa4.9□□□□□ -1.63
CAPN3-208ENST00000397204 NDUFA12Q9UI09 145 aa4.9□□□□□ -1.63
CAPN3-208ENST00000397204 C20orf202A1L168 122 aa4.89□□□□□ -1.63
CAPN3-208ENST00000397204 PRYO14603 147 aa4.89□□□□□ -1.63
CAPN3-208ENST00000397204 HSBP1O75506 76 aa4.89□□□□□ -1.63
CAPN3-208ENST00000397204 SPRR1AP35321 89 aa4.89□□□□□ -1.63
CAPN3-208ENST00000397204 LINC00483Q53H64 154 aa4.89□□□□□ -1.63
CAPN3-208ENST00000397204 CLLU1Q5K131 121 aa4.89□□□□□ -1.63
CAPN3-208ENST00000397204 TMEM170BQ5T4T1 132 aa4.89□□□□□ -1.63
CAPN3-208ENST00000397204 FAM19A2Q8N3H0 131 aa4.89□□□□□ -1.63
CAPN3-208ENST00000397204 A0A096LNJ9 63 aa4.88□□□□□ -1.63
CAPN3-208ENST00000397204 ETDCA0A1B0GVM5 59 aa4.88□□□□□ -1.63
CAPN3-208ENST00000397204 C11orf86A6NJI1 115 aa4.88□□□□□ -1.63
CAPN3-208ENST00000397204 KRTAP4-16G5E9R7 235 aaPredicted RBP4.88□□□□□ -1.63
CAPN3-208ENST00000397204 SLC25A20O43772 301 aa4.88□□□□□ -1.63
CAPN3-208ENST00000397204 HBDP02042 147 aa4.88□□□□□ -1.63
CAPN3-208ENST00000397204 SS18L2Q9UHA2 77 aa4.88□□□□□ -1.63
CAPN3-208ENST00000397204 FSIP2Q5CZC0 6907 aa4.87□□□□□ -1.63
CAPN3-208ENST00000397204 TMEM218A2RU14 115 aa4.87□□□□□ -1.63
CAPN3-208ENST00000397204 OCIAD2Q56VL3 154 aa4.87□□□□□ -1.63
CAPN3-208ENST00000397204 Q8N377 158 aa4.87□□□□□ -1.63
CAPN3-208ENST00000397204 SEC11CQ9BY50 192 aa4.87□□□□□ -1.63
CAPN3-208ENST00000397204 SMIM13P0DJ93 91 aa4.86□□□□□ -1.63
CAPN3-208ENST00000397204 GAGE2AQ6NT46 116 aa4.86□□□□□ -1.63
CAPN3-208ENST00000397204 URB1-AS1Q96HZ7 61 aa4.86□□□□□ -1.63
CAPN3-208ENST00000397204 SNHG12Q9BXW3 62 aa4.86□□□□□ -1.63
CAPN3-208ENST00000397204 TMEM223A0PJW6 202 aa4.85□□□□□ -1.63
CAPN3-208ENST00000397204 C18orf32Q8TCD1 76 aa4.85□□□□□ -1.63
CAPN3-208ENST00000397204 IGLV9-49A0A0B4J1Y8 123 aa4.84□□□□□ -1.63
CAPN3-208ENST00000397204 TRBV10-3A0A0K0K1G6 114 aa4.84□□□□□ -1.63
CAPN3-208ENST00000397204 SNRPEP62304 92 aaKnown RBP4.84□□□□□ -1.63
CAPN3-208ENST00000397204 UBE2V1Q13404 147 aa4.84□□□□□ -1.63
CAPN3-208ENST00000397204 MOBPQ13875 183 aa4.84□□□□□ -1.63
CAPN3-208ENST00000397204 MIR7-3HGQ8N6C7 128 aa4.84□□□□□ -1.63
CAPN3-208ENST00000397204 TRAV12-1A0A0B4J245 112 aa4.83□□□□□ -1.64
CAPN3-208ENST00000397204 NCR3O14931 201 aa4.83□□□□□ -1.64
CAPN3-208ENST00000397204 ERC2-IT1O76042 136 aa4.83□□□□□ -1.64
CAPN3-208ENST00000397204 PMCHL1Q16048 86 aa4.83□□□□□ -1.64
CAPN3-208ENST00000397204 MEIG1Q5JSS6 88 aa4.83□□□□□ -1.64
CAPN3-208ENST00000397204 TRAPPC1Q9Y5R8 145 aa4.83□□□□□ -1.64
CAPN3-208ENST00000397204 LOC107984156A0A0G2JMH3 177 aa4.82□□□□□ -1.64
CAPN3-208ENST00000397204 PYY3Q5JQD4 70 aa4.82□□□□□ -1.64
CAPN3-208ENST00000397204 ARL17AQ8IVW1 177 aa4.82□□□□□ -1.64
CAPN3-208ENST00000397204 TRBV10-2A0A0K0K1G8 114 aa4.81□□□□□ -1.64
CAPN3-208ENST00000397204 MYMXA0A1B0GTQ4 84 aa4.81□□□□□ -1.64
CAPN3-208ENST00000397204 CFC1BP0CG36 223 aa4.81□□□□□ -1.64
CAPN3-208ENST00000397204 RHEBQ15382 184 aa4.81□□□□□ -1.64
CAPN3-208ENST00000397204 SIGMAR1Q99720 223 aa4.81□□□□□ -1.64
CAPN3-208ENST00000397204 Q9BRP9 147 aa4.81□□□□□ -1.64
CAPN3-208ENST00000397204 SPANXB1Q9NS25 103 aaPredicted RBP4.81□□□□□ -1.64
CAPN3-208ENST00000397204 JOSD1Q15040 202 aaPredicted RBP4.8□□□□□ -1.64
CAPN3-208ENST00000397204 C10orf91Q5T1B1 145 aa4.8□□□□□ -1.64
CAPN3-208ENST00000397204 Q6ZRX8 168 aa4.8□□□□□ -1.64
CAPN3-208ENST00000397204 Q8N9P0 234 aaPredicted RBP4.8□□□□□ -1.64
CAPN3-208ENST00000397204 IFI27L1Q96BM0 104 aa4.8□□□□□ -1.64
CAPN3-208ENST00000397204 RPS10P5Q9NQ39 176 aa4.8□□□□□ -1.64
CAPN3-208ENST00000397204 S100A2P29034 98 aa4.79□□□□□ -1.64
CAPN3-208ENST00000397204 TAL2Q16559 108 aa4.79□□□□□ -1.64
CAPN3-208ENST00000397204 KRTAP19-2Q3LHN2 52 aa4.79□□□□□ -1.64
CAPN3-208ENST00000397204 COL5A1-AS1Q5SY13 56 aa4.79□□□□□ -1.64
CAPN3-208ENST00000397204 OR13C6PQ8NH95 151 aa4.79□□□□□ -1.64
CAPN3-208ENST00000397204 IGKV2-30P06310 120 aa4.78□□□□□ -1.64
CAPN3-208ENST00000397204 MT1HP80294 61 aa4.78□□□□□ -1.64
CAPN3-208ENST00000397204 CHCHD1Q96BP2 118 aaKnown RBP4.78□□□□□ -1.64
CAPN3-208ENST00000397204 HSPB8Q9UJY1 196 aa4.78□□□□□ -1.64
CAPN3-208ENST00000397204 NDUFC2O95298 119 aa4.77□□□□□ -1.65
CAPN3-208ENST00000397204 IGLV6-57P01721 117 aa4.77□□□□□ -1.65
CAPN3-208ENST00000397204 PCOTHQ58A44 107 aa4.77□□□□□ -1.65
CAPN3-208ENST00000397204 S100A7L2Q5SY68 101 aa4.77□□□□□ -1.65
CAPN3-208ENST00000397204 C9orf153Q5TBE3 101 aa4.77□□□□□ -1.65
CAPN3-208ENST00000397204 IGLV8-61A0A075B6I0 122 aa4.76□□□□□ -1.65
CAPN3-208ENST00000397204 LIMD2Q9BT23 127 aa4.76□□□□□ -1.65
CAPN3-208ENST00000397204 PRO1933Q9H354 126 aa4.76□□□□□ -1.65
CAPN3-208ENST00000397204 LEPROTO15243 131 aa4.75□□□□□ -1.65
CAPN3-208ENST00000397204 HINT1P49773 126 aaPredicted RBP4.75□□□□□ -1.65
CAPN3-208ENST00000397204 MIEN1Q9BRT3 115 aa4.75□□□□□ -1.65
CAPN3-208ENST00000397204 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
CAPN3-208ENST00000397204 TRAV23DV6A0A075B6W5 121 aa4.74□□□□□ -1.65
CAPN3-208ENST00000397204 ZNF73O43830 326 aaPredicted RBP4.74□□□□□ -1.65
CAPN3-208ENST00000397204 NMUP48645 174 aa4.74□□□□□ -1.65
CAPN3-208ENST00000397204 SLC25A34Q6PIV7 304 aa4.74□□□□□ -1.65
CAPN3-208ENST00000397204 ST20-AS1Q8NBB2 130 aa4.74□□□□□ -1.65
CAPN3-208ENST00000397204 C9orf92A6NGG3 77 aa4.73□□□□□ -1.65
CAPN3-208ENST00000397204 J3QQQ9 107 aa4.73□□□□□ -1.65
CAPN3-208ENST00000397204 SPRR1BP22528 89 aa4.73□□□□□ -1.65
CAPN3-208ENST00000397204 TSPEAR-AS2P59090 65 aa4.73□□□□□ -1.65
CAPN3-208ENST00000397204 KRTAP10-6P60371 365 aaPredicted RBP4.73□□□□□ -1.65
CAPN3-208ENST00000397204 PLNP26678 52 aa4.72□□□□□ -1.65
CAPN3-208ENST00000397204 CD164Q04900 197 aa4.72□□□□□ -1.65
CAPN3-208ENST00000397204 C4orf26Q17RF5 130 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms