RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.11□□□□□ -2.07
CDKN3-203ENST00000395577 A0A1W2PRE2 83 aa2.11□□□□□ -2.07
CDKN3-203ENST00000395577 HMGB3O15347 200 aaKnown RBP2.11□□□□□ -2.07
CDKN3-203ENST00000395577 SIX6O95475 246 aa2.11□□□□□ -2.07
CDKN3-203ENST00000395577 PKIAP61925 76 aa2.11□□□□□ -2.07
CDKN3-203ENST00000395577 FAM74A4Q5TZK3 123 aa2.11□□□□□ -2.07
CDKN3-203ENST00000395577 NMES1Q9C002 83 aa2.11□□□□□ -2.07
CDKN3-203ENST00000395577 IGHV1-24A0A0C4DH33 117 aa2.1□□□□□ -2.07
CDKN3-203ENST00000395577 TRBV6-5A0A0K0K1A5 114 aa2.1□□□□□ -2.07
CDKN3-203ENST00000395577 TMEM262E9PQX1 116 aa2.1□□□□□ -2.07
CDKN3-203ENST00000395577 LYRM1O43325 122 aa2.1□□□□□ -2.07
CDKN3-203ENST00000395577 TCL1BO95988 128 aa2.1□□□□□ -2.07
CDKN3-203ENST00000395577 IGLC6P0CF74 106 aa2.1□□□□□ -2.07
CDKN3-203ENST00000395577 MT1HP80294 61 aa2.1□□□□□ -2.07
CDKN3-203ENST00000395577 LINC01554Q52M75 96 aa2.1□□□□□ -2.07
CDKN3-203ENST00000395577 Q6ZQT0 140 aa2.1□□□□□ -2.07
CDKN3-203ENST00000395577 PHF5AQ7RTV0 110 aaKnown RBP2.1□□□□□ -2.07
CDKN3-203ENST00000395577 NUP35Q8NFH5 326 aa2.1□□□□□ -2.07
CDKN3-203ENST00000395577 LINC00526Q96FQ7 95 aa2.1□□□□□ -2.07
CDKN3-203ENST00000395577 AQP10Q96PS8 301 aa2.1□□□□□ -2.07
CDKN3-203ENST00000395577 LINC00474Q9P2X8 69 aa2.1□□□□□ -2.07
CDKN3-203ENST00000395577 TRBV25-1A0A075B6N4 114 aa2.09□□□□□ -2.07
CDKN3-203ENST00000395577 C1orf196B1AJZ1 125 aa2.09□□□□□ -2.07
CDKN3-203ENST00000395577 C17orf112F2Z3M2 114 aa2.09□□□□□ -2.07
CDKN3-203ENST00000395577 MPC2O95563 127 aa2.09□□□□□ -2.07
CDKN3-203ENST00000395577 RHEBQ15382 184 aa2.09□□□□□ -2.07
CDKN3-203ENST00000395577 C9orf116Q5BN46 136 aaPredicted RBP2.09□□□□□ -2.07
CDKN3-203ENST00000395577 FAM74A1Q5RGS3 127 aa2.09□□□□□ -2.07
CDKN3-203ENST00000395577 LCA10Q71F78 164 aa2.09□□□□□ -2.07
CDKN3-203ENST00000395577 PPP1R1CQ8WVI7 109 aa2.09□□□□□ -2.07
CDKN3-203ENST00000395577 DIRC1Q969H9 104 aa2.09□□□□□ -2.07
CDKN3-203ENST00000395577 CARD19Q96LW7 228 aa2.09□□□□□ -2.07
CDKN3-203ENST00000395577 NAA38Q9BRA0 125 aaKnown RBP2.09□□□□□ -2.07
CDKN3-203ENST00000395577 PSMG3Q9BT73 122 aaPredicted RBP2.09□□□□□ -2.07
CDKN3-203ENST00000395577 DPH3P1Q9H4G8 78 aa2.09□□□□□ -2.07
CDKN3-203ENST00000395577 ZFP30Q9Y2G7 519 aa2.09□□□□□ -2.07
CDKN3-203ENST00000395577 MACF1Q9UPN3 7388 aaKnown RBP2.09□□□□□ -2.08
CDKN3-203ENST00000395577 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
CDKN3-203ENST00000395577 BCL2P10415 239 aa2.08□□□□□ -2.08
CDKN3-203ENST00000395577 TPT1P13693 172 aaKnown RBP2.08□□□□□ -2.08
CDKN3-203ENST00000395577 RAB5CP51148 216 aa2.08□□□□□ -2.08
CDKN3-203ENST00000395577 ZNF56Q15929 161 aa2.08□□□□□ -2.08
CDKN3-203ENST00000395577 ASB16-AS1Q495Z4 193 aa2.08□□□□□ -2.08
CDKN3-203ENST00000395577 C1orf137Q5JT78 98 aa2.08□□□□□ -2.08
CDKN3-203ENST00000395577 CNFNQ9BYD5 112 aa2.08□□□□□ -2.08
CDKN3-203ENST00000395577 SMIM3Q9BZL3 60 aa2.08□□□□□ -2.08
CDKN3-203ENST00000395577 TMEM167BQ9NRX6 74 aa2.08□□□□□ -2.08
CDKN3-203ENST00000395577 IGHV1-58A0A0C4DH39 117 aa2.07□□□□□ -2.08
CDKN3-203ENST00000395577 LINC00959A0A1B0GUT2 108 aa2.07□□□□□ -2.08
CDKN3-203ENST00000395577 IFNA7P01567 189 aa2.07□□□□□ -2.08
CDKN3-203ENST00000395577 TRIQKQ629K1 86 aa2.07□□□□□ -2.08
CDKN3-203ENST00000395577 LOC107984640A0A0U1RRK4 108 aa2.06□□□□□ -2.08
CDKN3-203ENST00000395577 CCL25O15444 150 aa2.06□□□□□ -2.08
CDKN3-203ENST00000395577 MT-ND6P03923 174 aa2.06□□□□□ -2.08
CDKN3-203ENST00000395577 SERF2P84101 59 aa2.06□□□□□ -2.08
CDKN3-203ENST00000395577 Q5BKY6 102 aa2.06□□□□□ -2.08
CDKN3-203ENST00000395577 LYRM7Q5U5X0 104 aa2.06□□□□□ -2.08
CDKN3-203ENST00000395577 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
CDKN3-203ENST00000395577 DPH3Q96FX2 82 aa2.06□□□□□ -2.08
CDKN3-203ENST00000395577 TCEAL7Q9BRU2 100 aa2.06□□□□□ -2.08
CDKN3-203ENST00000395577 NIT2Q9NQR4 276 aa2.06□□□□□ -2.08
CDKN3-203ENST00000395577 CDC42SE2Q9NRR3 84 aa2.06□□□□□ -2.08
CDKN3-203ENST00000395577 TNFSF18Q9UNG2 199 aa2.06□□□□□ -2.08
CDKN3-203ENST00000395577 SYNE2Q8WXH0 6885 aaKnown RBP2.05□□□□□ -2.08
CDKN3-203ENST00000395577 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.05□□□□□ -2.08
CDKN3-203ENST00000395577 CTXND1A0A1B0GTU2 59 aa2.05□□□□□ -2.08
CDKN3-203ENST00000395577 IGKV2-29A2NJV5 120 aaPredicted RBP2.05□□□□□ -2.08
CDKN3-203ENST00000395577 S100A5P33763 92 aa2.05□□□□□ -2.08
CDKN3-203ENST00000395577 RPL39LQ96EH5 51 aaKnown RBP2.05□□□□□ -2.08
CDKN3-203ENST00000395577 AP1S3Q96PC3 154 aa2.05□□□□□ -2.08
CDKN3-203ENST00000395577 RETNLBQ9BQ08 111 aa2.05□□□□□ -2.08
CDKN3-203ENST00000395577 CCDC32Q9BV29 185 aa2.05□□□□□ -2.08
CDKN3-203ENST00000395577 NCR2O95944 276 aa2.04□□□□□ -2.08
CDKN3-203ENST00000395577 ZNF25P17030 456 aaPredicted RBP2.04□□□□□ -2.08
CDKN3-203ENST00000395577 POLR2KP53803 58 aaKnown RBP2.04□□□□□ -2.08
CDKN3-203ENST00000395577 FOXA3P55318 350 aaPredicted RBP2.04□□□□□ -2.08
CDKN3-203ENST00000395577 RPL7L1Q6DKI1 246 aaKnown RBP2.04□□□□□ -2.08
CDKN3-203ENST00000395577 HIST1H2BLQ99880 126 aa2.04□□□□□ -2.08
CDKN3-203ENST00000395577 MRPL35Q9NZE8 188 aaKnown RBP2.04□□□□□ -2.08
CDKN3-203ENST00000395577 C6orf48Q9UBA6 75 aa2.04□□□□□ -2.08
CDKN3-203ENST00000395577 TRAV1-1A0A0B4J248 108 aa2.03□□□□□ -2.08
CDKN3-203ENST00000395577 IGKV3OR2-268A0A0C4DH90 116 aa2.03□□□□□ -2.08
CDKN3-203ENST00000395577 CCDC160A6NGH7 325 aa2.03□□□□□ -2.08
CDKN3-203ENST00000395577 SPANXN1Q5VSR9 72 aa2.03□□□□□ -2.08
CDKN3-203ENST00000395577 C9orf62Q8N4C0 152 aa2.03□□□□□ -2.08
CDKN3-203ENST00000395577 NEBP20929 6669 aa2.03□□□□□ -2.09
CDKN3-203ENST00000395577 TRBV27A0A0K0K1C4 114 aa2.02□□□□□ -2.09
CDKN3-203ENST00000395577 MAP1LC3B2A6NCE7 125 aa2.02□□□□□ -2.09
CDKN3-203ENST00000395577 MGPP08493 103 aa2.02□□□□□ -2.09
CDKN3-203ENST00000395577 EIF5AP63241 154 aaKnown RBP2.02□□□□□ -2.09
CDKN3-203ENST00000395577 UNQ6190/PRO20217Q6UXQ8 127 aa2.02□□□□□ -2.09
CDKN3-203ENST00000395577 LINC00299Q6ZSB3 139 aa2.02□□□□□ -2.09
CDKN3-203ENST00000395577 BAGE2Q86Y30 109 aa2.02□□□□□ -2.09
CDKN3-203ENST00000395577 TSKUQ8WUA8 353 aa2.02□□□□□ -2.09
CDKN3-203ENST00000395577 MAP1LC3BQ9GZQ8 125 aa2.02□□□□□ -2.09
CDKN3-203ENST00000395577 RPL35P42766 123 aaKnown RBP2.01□□□□□ -2.09
CDKN3-203ENST00000395577 UBE2G1P62253 170 aa2.01□□□□□ -2.09
CDKN3-203ENST00000395577 SPAG11BQ08648 103 aa2.01□□□□□ -2.09
CDKN3-203ENST00000395577 Q6ZUT4 128 aa2.01□□□□□ -2.09
CDKN3-203ENST00000395577 TMEM242Q9NWH2 141 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms