RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 LINC00313P59037 77 aa11.4□□□□□ -0.59
SIN3A-203ENST00000394949 LINC00612Q8N6U2 182 aa11.39□□□□□ -0.59
SIN3A-203ENST00000394949 IGFL1Q6UW32 110 aa11.39□□□□□ -0.59
SIN3A-203ENST00000394949 FAM229AH3BQW9 127 aa11.39□□□□□ -0.59
SIN3A-203ENST00000394949 RTL8CO15255 209 aa11.38□□□□□ -0.59
SIN3A-203ENST00000394949 UQCR11O14957 56 aa11.36□□□□□ -0.59
SIN3A-203ENST00000394949 KTN1-AS1Q86SY8 53 aa11.35□□□□□ -0.59
SIN3A-203ENST00000394949 PLA2G2DQ9UNK4 145 aa11.35□□□□□ -0.59
SIN3A-203ENST00000394949 SPANXA2-OT1Q8N9U9 137 aa11.35□□□□□ -0.59
SIN3A-203ENST00000394949 FAM168BA1KXE4 195 aa11.34□□□□□ -0.59
SIN3A-203ENST00000394949 GIG44P09565 113 aaPredicted RBP11.34□□□□□ -0.59
SIN3A-203ENST00000394949 C15orf56Q8N910 161 aa11.33□□□□□ -0.6
SIN3A-203ENST00000394949 A0A096LNT2 108 aa11.32□□□□□ -0.6
SIN3A-203ENST00000394949 TLX1NBP0CAT3 122 aa11.32□□□□□ -0.6
SIN3A-203ENST00000394949 WWC2-AS2Q96NR7 200 aa11.31□□□□□ -0.6
SIN3A-203ENST00000394949 C8orf17Q9NRJ1 99 aa11.31□□□□□ -0.6
SIN3A-203ENST00000394949 C19orf73Q9NVV2 129 aa11.3□□□□□ -0.6
SIN3A-203ENST00000394949 CHTF8P0CG12 524 aa11.28□□□□□ -0.6
SIN3A-203ENST00000394949 TYMSOSQ8TAI1 123 aa11.27□□□□□ -0.6
SIN3A-203ENST00000394949 IGLV5-48A0A075B6I7 105 aa11.26□□□□□ -0.61
SIN3A-203ENST00000394949 A0A1W2PNM2 257 aa11.26□□□□□ -0.61
SIN3A-203ENST00000394949 OCR1Q9BZK8 76 aa11.26□□□□□ -0.61
SIN3A-203ENST00000394949 LCA10Q71F78 164 aa11.26□□□□□ -0.61
SIN3A-203ENST00000394949 Q1T7F1 81 aa11.25□□□□□ -0.61
SIN3A-203ENST00000394949 A0A1B0GVX0 72 aa11.24□□□□□ -0.61
SIN3A-203ENST00000394949 MIR22HGQ0VDD5 57 aa11.23□□□□□ -0.61
SIN3A-203ENST00000394949 IGLV8-61A0A075B6I0 122 aa11.22□□□□□ -0.61
SIN3A-203ENST00000394949 BPTFQ12830 3046 aa11.22□□□□□ -0.61
SIN3A-203ENST00000394949 K7EIL1 84 aa11.22□□□□□ -0.61
SIN3A-203ENST00000394949 FAM104AQ969W3 186 aa11.21□□□□□ -0.61
SIN3A-203ENST00000394949 CDC42SE1Q9NRR8 79 aa11.21□□□□□ -0.62
SIN3A-203ENST00000394949 HELZ2Q9BYK8 2649 aaKnown RBP11.19□□□□□ -0.62
SIN3A-203ENST00000394949 FLNAP21333 2647 aaKnown RBP11.18□□□□□ -0.62
SIN3A-203ENST00000394949 KRTAP10-11P60412 298 aa11.17□□□□□ -0.62
SIN3A-203ENST00000394949 Q5XG85 94 aa11.15□□□□□ -0.62
SIN3A-203ENST00000394949 GOLGB1Q14789 3259 aaKnown RBP11.14□□□□□ -0.63
SIN3A-203ENST00000394949 IGLV5-37A0A075B6J1 123 aa11.14□□□□□ -0.63
SIN3A-203ENST00000394949 SSBP3-AS1Q7Z2R9 100 aa11.14□□□□□ -0.63
SIN3A-203ENST00000394949 ITPR3Q14573 2671 aa11.13□□□□□ -0.63
SIN3A-203ENST00000394949 Q96NJ1 140 aa11.13□□□□□ -0.63
SIN3A-203ENST00000394949 PLA2G1BP04054 148 aaKnown RBP11.12□□□□□ -0.63
SIN3A-203ENST00000394949 SPINT4Q6UDR6 99 aa11.12□□□□□ -0.63
SIN3A-203ENST00000394949 SPRR4Q96PI1 79 aa11.1□□□□□ -0.63
SIN3A-203ENST00000394949 KRTAP10-3P60369 221 aa11.1□□□□□ -0.63
SIN3A-203ENST00000394949 A0A0G2JQZ4 141 aa11.1□□□□□ -0.63
SIN3A-203ENST00000394949 A0A1W2PNN7 141 aa11.1□□□□□ -0.63
SIN3A-203ENST00000394949 C9orf163Q8N9P6 203 aa11.1□□□□□ -0.63
SIN3A-203ENST00000394949 ZNF861PO60384 105 aa11.08□□□□□ -0.64
SIN3A-203ENST00000394949 DSCR10P59022 87 aa11.07□□□□□ -0.64
SIN3A-203ENST00000394949 CENPEQ02224 2701 aa11.05□□□□□ -0.64
SIN3A-203ENST00000394949 A0A087WTM6 91 aa11.04□□□□□ -0.64
SIN3A-203ENST00000394949 STAB1Q9NY15 2570 aa11.04□□□□□ -0.64
SIN3A-203ENST00000394949 CFAP46Q8IYW2 2715 aa11.04□□□□□ -0.64
SIN3A-203ENST00000394949 KRTAP1-3Q8IUG1 177 aa11.03□□□□□ -0.64
SIN3A-203ENST00000394949 CYSTM1Q9H1C7 97 aa11.03□□□□□ -0.64
SIN3A-203ENST00000394949 FP248Q71RG6 208 aaPredicted RBP11.03□□□□□ -0.64
SIN3A-203ENST00000394949 CNBPP62633 177 aaKnown RBP11.02□□□□□ -0.64
SIN3A-203ENST00000394949 Q75L30 129 aa11.01□□□□□ -0.65
SIN3A-203ENST00000394949 IGLV7-46A0A075B6I9 117 aa11.01□□□□□ -0.65
SIN3A-203ENST00000394949 KRTAP1-1Q07627 177 aa10.99□□□□□ -0.65
SIN3A-203ENST00000394949 LINC00304Q8N9R0 145 aa10.96□□□□□ -0.66
SIN3A-203ENST00000394949 CRIPTQ9P021 101 aa10.94□□□□□ -0.66
SIN3A-203ENST00000394949 DNAH12Q6ZR08 3092 aa10.93□□□□□ -0.66
SIN3A-203ENST00000394949 APLNQ9ULZ1 77 aa10.93□□□□□ -0.66
SIN3A-203ENST00000394949 J3QL48 77 aa10.92□□□□□ -0.66
SIN3A-203ENST00000394949 FAM229BQ4G0N7 80 aa10.92□□□□□ -0.66
SIN3A-203ENST00000394949 Q8N9P0 234 aaPredicted RBP10.92□□□□□ -0.66
SIN3A-203ENST00000394949 AKAP13Q12802 2813 aa10.91□□□□□ -0.66
SIN3A-203ENST00000394949 RBM12B-AS1Q9P1G2 102 aa10.91□□□□□ -0.66
SIN3A-203ENST00000394949 CASC10Q5T4H9 136 aa10.9□□□□□ -0.66
SIN3A-203ENST00000394949 LINC01558Q9Y6Z2 57 aa10.9□□□□□ -0.66
SIN3A-203ENST00000394949 PRR26Q8N8Z3 221 aa10.9□□□□□ -0.67
SIN3A-203ENST00000394949 IGLV7-43P04211 117 aa10.89□□□□□ -0.67
SIN3A-203ENST00000394949 CEP350Q5VT06 3117 aa10.88□□□□□ -0.67
SIN3A-203ENST00000394949 PSORS1C2Q9UIG4 136 aa10.88□□□□□ -0.67
SIN3A-203ENST00000394949 OXTP01178 125 aa10.84□□□□□ -0.67
SIN3A-203ENST00000394949 CR1P17927 2039 aa10.84□□□□□ -0.67
SIN3A-203ENST00000394949 SETXQ7Z333 2677 aaKnown RBP10.84□□□□□ -0.67
SIN3A-203ENST00000394949 Q8NDZ9 215 aa10.84□□□□□ -0.67
SIN3A-203ENST00000394949 SPRR1AP35321 89 aa10.83□□□□□ -0.68
SIN3A-203ENST00000394949 ANAPC11Q9NYG5 84 aa10.82□□□□□ -0.68
SIN3A-203ENST00000394949 TEP1Q99973 2627 aaKnown RBP10.82□□□□□ -0.68
SIN3A-203ENST00000394949 SMR3BP02814 79 aaPredicted RBP10.8□□□□□ -0.68
SIN3A-203ENST00000394949 Q5VV11 94 aa10.8□□□□□ -0.68
SIN3A-203ENST00000394949 MMP24-AS1A0A0U1RRL7 71 aa10.79□□□□□ -0.68
SIN3A-203ENST00000394949 COX6B2Q6YFQ2 88 aa10.77□□□□□ -0.69
SIN3A-203ENST00000394949 LINC01554Q52M75 96 aa10.75□□□□□ -0.69
SIN3A-203ENST00000394949 CHD6Q8TD26 2715 aa10.75□□□□□ -0.69
SIN3A-203ENST00000394949 HRES1P13985 223 aa10.74□□□□□ -0.69
SIN3A-203ENST00000394949 CHD7Q9P2D1 2997 aa10.74□□□□□ -0.69
SIN3A-203ENST00000394949 C9orf92A6NGG3 77 aa10.73□□□□□ -0.69
SIN3A-203ENST00000394949 Q8N1X5 172 aa10.72□□□□□ -0.69
SIN3A-203ENST00000394949 TEX15Q9BXT5 2789 aa10.72□□□□□ -0.69
SIN3A-203ENST00000394949 SPRR1BP22528 89 aa10.7□□□□□ -0.7
SIN3A-203ENST00000394949 LINC00472Q9H8W2 130 aa10.69□□□□□ -0.7
SIN3A-203ENST00000394949 COL6A5A8TX70 2615 aa10.68□□□□□ -0.7
SIN3A-203ENST00000394949 NBEAL1Q6ZS30 2694 aa10.66□□□□□ -0.7
SIN3A-203ENST00000394949 TNP2Q05952 138 aa10.65□□□□□ -0.7
SIN3A-203ENST00000394949 ZNF292O60281 2723 aa10.64□□□□□ -0.71
SIN3A-203ENST00000394949 A0A1B0GU33 70 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms