RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 NAV2Q8IVL1 2488 aa7.99□□□□□ -1.13
SIN3A-202ENST00000394947 TTC28Q96AY4 2481 aa7.98□□□□□ -1.13
SIN3A-202ENST00000394947 KCNQ1DNQ9H478 68 aa7.98□□□□□ -1.13
SIN3A-202ENST00000394947 PRR26Q8N8Z3 221 aa7.97□□□□□ -1.13
SIN3A-202ENST00000394947 WDR87Q6ZQQ6 2873 aa7.97□□□□□ -1.13
SIN3A-202ENST00000394947 LINC00528Q8N1L1 170 aa7.97□□□□□ -1.13
SIN3A-202ENST00000394947 K7EIL1 84 aa7.96□□□□□ -1.13
SIN3A-202ENST00000394947 PSORS1C2Q9UIG4 136 aa7.96□□□□□ -1.13
SIN3A-202ENST00000394947 PCSK5Q92824 1860 aa7.96□□□□□ -1.14
SIN3A-202ENST00000394947 C9orf163Q8N9P6 203 aa7.96□□□□□ -1.14
SIN3A-202ENST00000394947 A0A087WTM6 91 aa7.96□□□□□ -1.14
SIN3A-202ENST00000394947 TLN1Q9Y490 2541 aaKnown RBP7.95□□□□□ -1.14
SIN3A-202ENST00000394947 LINC00483Q53H64 154 aa7.94□□□□□ -1.14
SIN3A-202ENST00000394947 H7BZZ5 65 aa7.94□□□□□ -1.14
SIN3A-202ENST00000394947 IGLV7-43P04211 117 aa7.94□□□□□ -1.14
SIN3A-202ENST00000394947 TLX1NBP0CAT3 122 aa7.93□□□□□ -1.14
SIN3A-202ENST00000394947 Q6ZSA8 131 aa7.93□□□□□ -1.14
SIN3A-202ENST00000394947 COL4A2P08572 1712 aa7.91□□□□□ -1.14
SIN3A-202ENST00000394947 PLA2G2DQ9UNK4 145 aa7.91□□□□□ -1.14
SIN3A-202ENST00000394947 PRAC1Q96KF2 57 aa7.9□□□□□ -1.14
SIN3A-202ENST00000394947 Q1T7F1 81 aa7.9□□□□□ -1.15
SIN3A-202ENST00000394947 KRTAP10-3P60369 221 aa7.89□□□□□ -1.15
SIN3A-202ENST00000394947 H3BS24 57 aa7.87□□□□□ -1.15
SIN3A-202ENST00000394947 JMJD1CQ15652 2540 aa7.87□□□□□ -1.15
SIN3A-202ENST00000394947 IGF2RP11717 2491 aa7.87□□□□□ -1.15
SIN3A-202ENST00000394947 KLKP1Q107X0 134 aa7.86□□□□□ -1.15
SIN3A-202ENST00000394947 SPRR4Q96PI1 79 aa7.85□□□□□ -1.15
SIN3A-202ENST00000394947 A0A1W2PNM2 257 aa7.84□□□□□ -1.15
SIN3A-202ENST00000394947 F8P00451 2351 aa7.84□□□□□ -1.15
SIN3A-202ENST00000394947 A0A1B0GU33 70 aa7.83□□□□□ -1.16
SIN3A-202ENST00000394947 LINC00612Q8N6U2 182 aa7.83□□□□□ -1.16
SIN3A-202ENST00000394947 ZFYVE26Q68DK2 2539 aa7.82□□□□□ -1.16
SIN3A-202ENST00000394947 CR1P17927 2039 aa7.81□□□□□ -1.16
SIN3A-202ENST00000394947 IGLV7-46A0A075B6I9 117 aa7.81□□□□□ -1.16
SIN3A-202ENST00000394947 TLN2Q9Y4G6 2542 aa7.81□□□□□ -1.16
SIN3A-202ENST00000394947 FAM229BQ4G0N7 80 aa7.81□□□□□ -1.16
SIN3A-202ENST00000394947 ACANP16112 2415 aa7.81□□□□□ -1.16
SIN3A-202ENST00000394947 GOLGB1Q14789 3259 aaKnown RBP7.8□□□□□ -1.16
SIN3A-202ENST00000394947 CENPFP49454 3210 aa7.78□□□□□ -1.16
SIN3A-202ENST00000394947 ABCA12Q86UK0 2595 aa7.78□□□□□ -1.16
SIN3A-202ENST00000394947 CSAG1Q6PB30 78 aa7.78□□□□□ -1.16
SIN3A-202ENST00000394947 S4R3F8 94 aa7.78□□□□□ -1.16
SIN3A-202ENST00000394947 GIG44P09565 113 aaPredicted RBP7.77□□□□□ -1.17
SIN3A-202ENST00000394947 HRES1P13985 223 aa7.77□□□□□ -1.17
SIN3A-202ENST00000394947 TNP2Q05952 138 aa7.77□□□□□ -1.17
SIN3A-202ENST00000394947 SPINK7P58062 85 aa7.76□□□□□ -1.17
SIN3A-202ENST00000394947 PRR34Q9NV39 138 aa7.76□□□□□ -1.17
SIN3A-202ENST00000394947 NCOR2Q9Y618 2525 aa7.74□□□□□ -1.17
SIN3A-202ENST00000394947 C19orf73Q9NVV2 129 aa7.73□□□□□ -1.17
SIN3A-202ENST00000394947 ZNF462Q96JM2 2506 aa7.72□□□□□ -1.17
SIN3A-202ENST00000394947 SPANXA2-OT1Q8N9U9 137 aa7.71□□□□□ -1.18
SIN3A-202ENST00000394947 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.7□□□□□ -1.18
SIN3A-202ENST00000394947 Q8N9P0 234 aaPredicted RBP7.7□□□□□ -1.18
SIN3A-202ENST00000394947 EP400Q96L91 3159 aa7.7□□□□□ -1.18
SIN3A-202ENST00000394947 A0A0A0MQY5 61 aa7.69□□□□□ -1.18
SIN3A-202ENST00000394947 CNBPP62633 177 aaKnown RBP7.68□□□□□ -1.18
SIN3A-202ENST00000394947 C10orf142B7Z368 130 aa7.66□□□□□ -1.18
SIN3A-202ENST00000394947 SETD2Q9BYW2 2564 aaPredicted RBP7.66□□□□□ -1.18
SIN3A-202ENST00000394947 R4GN34 69 aa7.65□□□□□ -1.18
SIN3A-202ENST00000394947 H1FX-AS1Q4G0G2 97 aa7.64□□□□□ -1.19
SIN3A-202ENST00000394947 OCR1Q9BZK8 76 aa7.63□□□□□ -1.19
SIN3A-202ENST00000394947 ANKRD17O75179 2603 aaKnown RBP7.62□□□□□ -1.19
SIN3A-202ENST00000394947 Q75L30 129 aa7.61□□□□□ -1.19
SIN3A-202ENST00000394947 DMAC1Q96GE9 116 aa7.6□□□□□ -1.19
SIN3A-202ENST00000394947 ZCCHC13Q8WW36 166 aaKnown RBP7.59□□□□□ -1.19
SIN3A-202ENST00000394947 PKD1L2Q7Z442 2459 aa7.58□□□□□ -1.2
SIN3A-202ENST00000394947 CYSTM1Q9H1C7 97 aa7.57□□□□□ -1.2
SIN3A-202ENST00000394947 M0QZ58 72 aa7.56□□□□□ -1.2
SIN3A-202ENST00000394947 SPATA8Q6RVD6 105 aa7.55□□□□□ -1.2
SIN3A-202ENST00000394947 Q5VSD8 79 aa7.55□□□□□ -1.2
SIN3A-202ENST00000394947 Q5W150 140 aa7.54□□□□□ -1.2
SIN3A-202ENST00000394947 MMP24-AS1A0A0U1RRL7 71 aa7.52□□□□□ -1.21
SIN3A-202ENST00000394947 Q5VV11 94 aa7.51□□□□□ -1.21
SIN3A-202ENST00000394947 Q5XG85 94 aa7.51□□□□□ -1.21
SIN3A-202ENST00000394947 BPTFQ12830 3046 aa7.51□□□□□ -1.21
SIN3A-202ENST00000394947 USP9XQ93008 2570 aaPredicted RBP7.51□□□□□ -1.21
SIN3A-202ENST00000394947 FP248Q71RG6 208 aaPredicted RBP7.51□□□□□ -1.21
SIN3A-202ENST00000394947 ROMO1P60602 79 aa7.49□□□□□ -1.21
SIN3A-202ENST00000394947 ADM2Q7Z4H4 148 aa7.49□□□□□ -1.21
SIN3A-202ENST00000394947 LINC01558Q9Y6Z2 57 aa7.49□□□□□ -1.21
SIN3A-202ENST00000394947 PLAC4Q8WY50 150 aa7.48□□□□□ -1.21
SIN3A-202ENST00000394947 A0A096LNT2 108 aa7.46□□□□□ -1.21
SIN3A-202ENST00000394947 Q8NDZ9 215 aa7.45□□□□□ -1.22
SIN3A-202ENST00000394947 POLQO75417 2590 aa7.43□□□□□ -1.22
SIN3A-202ENST00000394947 KLK9Q2XQG4 91 aa7.42□□□□□ -1.22
SIN3A-202ENST00000394947 UTRNP46939 3433 aa7.42□□□□□ -1.22
SIN3A-202ENST00000394947 RPL37P61927 97 aaKnown RBP7.42□□□□□ -1.22
SIN3A-202ENST00000394947 C20orf166-AS1Q96NR2 134 aa7.4□□□□□ -1.22
SIN3A-202ENST00000394947 SPTBN4Q9H254 2564 aa7.39□□□□□ -1.23
SIN3A-202ENST00000394947 MTORP42345 2549 aa7.38□□□□□ -1.23
SIN3A-202ENST00000394947 KRTAP1-3Q8IUG1 177 aa7.38□□□□□ -1.23
SIN3A-202ENST00000394947 CHD8Q9HCK8 2581 aa7.38□□□□□ -1.23
SIN3A-202ENST00000394947 DNAH12Q6ZR08 3092 aa7.37□□□□□ -1.23
SIN3A-202ENST00000394947 SEC61BP60468 96 aaKnown RBP7.35□□□□□ -1.23
SIN3A-202ENST00000394947 ANKRD11Q6UB99 2663 aaPredicted RBP7.35□□□□□ -1.23
SIN3A-202ENST00000394947 PLAC8Q9NZF1 115 aa7.34□□□□□ -1.23
SIN3A-202ENST00000394947 C5orf42Q9H799 3197 aa7.33□□□□□ -1.24
SIN3A-202ENST00000394947 KRTAP1-1Q07627 177 aa7.32□□□□□ -1.24
SIN3A-202ENST00000394947 USP24Q9UPU5 2620 aa7.31□□□□□ -1.24
SIN3A-202ENST00000394947 KRTAP10-2P60368 255 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms