RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 FAM229BQ4G0N7 80 aa5.56□□□□□ -1.52
GABRA1-202ENST00000393943 C4orf48Q5BLP8 95 aa5.56□□□□□ -1.52
GABRA1-202ENST00000393943 CDC42SE1Q9NRR8 79 aa5.56□□□□□ -1.52
GABRA1-202ENST00000393943 PKD1L2Q7Z442 2459 aa5.56□□□□□ -1.52
GABRA1-202ENST00000393943 UNC80Q8N2C7 3258 aa5.56□□□□□ -1.52
GABRA1-202ENST00000393943 C7orf65Q6ZTY9 151 aa5.56□□□□□ -1.52
GABRA1-202ENST00000393943 SPAG11AQ6PDA7 123 aa5.55□□□□□ -1.52
GABRA1-202ENST00000393943 Q75L30 129 aa5.55□□□□□ -1.52
GABRA1-202ENST00000393943 LINC00588Q9Y4M8 146 aa5.55□□□□□ -1.52
GABRA1-202ENST00000393943 FAM168BA1KXE4 195 aa5.55□□□□□ -1.52
GABRA1-202ENST00000393943 LRRK2Q5S007 2527 aa5.54□□□□□ -1.52
GABRA1-202ENST00000393943 TRIOO75962 3097 aa5.54□□□□□ -1.52
GABRA1-202ENST00000393943 CHD8Q9HCK8 2581 aa5.54□□□□□ -1.52
GABRA1-202ENST00000393943 IGLV8-61A0A075B6I0 122 aa5.54□□□□□ -1.52
GABRA1-202ENST00000393943 K7ERS5 55 aa5.54□□□□□ -1.52
GABRA1-202ENST00000393943 LAMA1P25391 3075 aa5.54□□□□□ -1.52
GABRA1-202ENST00000393943 LCE6AA0A183 80 aa5.54□□□□□ -1.52
GABRA1-202ENST00000393943 SMR3AQ99954 134 aa5.54□□□□□ -1.52
GABRA1-202ENST00000393943 MRPL34Q9BQ48 92 aaKnown RBP5.54□□□□□ -1.52
GABRA1-202ENST00000393943 IGLV7-46A0A075B6I9 117 aa5.53□□□□□ -1.52
GABRA1-202ENST00000393943 SPINK6Q6UWN8 80 aa5.53□□□□□ -1.52
GABRA1-202ENST00000393943 SPTBN4Q9H254 2564 aa5.53□□□□□ -1.52
GABRA1-202ENST00000393943 CR1P17927 2039 aa5.53□□□□□ -1.52
GABRA1-202ENST00000393943 C8orf87E5RJ46 101 aa5.53□□□□□ -1.52
GABRA1-202ENST00000393943 DNAH14Q0VDD8 3507 aa5.53□□□□□ -1.52
GABRA1-202ENST00000393943 A0A1B0GU69 56 aa5.53□□□□□ -1.52
GABRA1-202ENST00000393943 TNP2Q05952 138 aa5.53□□□□□ -1.52
GABRA1-202ENST00000393943 ZCCHC13Q8WW36 166 aaKnown RBP5.52□□□□□ -1.53
GABRA1-202ENST00000393943 C8orf17Q9NRJ1 99 aa5.52□□□□□ -1.53
GABRA1-202ENST00000393943 CDH23Q9H251 3354 aa5.52□□□□□ -1.53
GABRA1-202ENST00000393943 POLQO75417 2590 aa5.52□□□□□ -1.53
GABRA1-202ENST00000393943 NUPR2A6NF83 97 aa5.52□□□□□ -1.53
GABRA1-202ENST00000393943 DSPP15924 2871 aaKnown RBP5.52□□□□□ -1.53
GABRA1-202ENST00000393943 CNBPP62633 177 aaKnown RBP5.51□□□□□ -1.53
GABRA1-202ENST00000393943 ZNF292O60281 2723 aa5.51□□□□□ -1.53
GABRA1-202ENST00000393943 Q8N9P0 234 aaPredicted RBP5.51□□□□□ -1.53
GABRA1-202ENST00000393943 KRTAP10-3P60369 221 aa5.51□□□□□ -1.53
GABRA1-202ENST00000393943 NBEAQ8NFP9 2946 aa5.51□□□□□ -1.53
GABRA1-202ENST00000393943 LCA10Q71F78 164 aa5.5□□□□□ -1.53
GABRA1-202ENST00000393943 ZNF462Q96JM2 2506 aa5.5□□□□□ -1.53
GABRA1-202ENST00000393943 KRTAP1-1Q07627 177 aa5.5□□□□□ -1.53
GABRA1-202ENST00000393943 A0A1B0GVX0 72 aa5.5□□□□□ -1.53
GABRA1-202ENST00000393943 MTORP42345 2549 aa5.49□□□□□ -1.53
GABRA1-202ENST00000393943 VPS13AQ96RL7 3174 aa5.49□□□□□ -1.53
GABRA1-202ENST00000393943 KRTAP26-1Q6PEX3 210 aa5.49□□□□□ -1.53
GABRA1-202ENST00000393943 PHF5AQ7RTV0 110 aaKnown RBP5.49□□□□□ -1.53
GABRA1-202ENST00000393943 LINC01558Q9Y6Z2 57 aa5.48□□□□□ -1.53
GABRA1-202ENST00000393943 NOTCH2Q04721 2471 aa5.48□□□□□ -1.53
GABRA1-202ENST00000393943 FAM229AH3BQW9 127 aa5.48□□□□□ -1.53
GABRA1-202ENST00000393943 SPRR1BP22528 89 aa5.48□□□□□ -1.53
GABRA1-202ENST00000393943 Q5VV11 94 aa5.47□□□□□ -1.53
GABRA1-202ENST00000393943 MGAQ8IWI9 3026 aa5.46□□□□□ -1.53
GABRA1-202ENST00000393943 ZFYVE26Q68DK2 2539 aa5.46□□□□□ -1.54
GABRA1-202ENST00000393943 KRTAP4-16G5E9R7 235 aaPredicted RBP5.45□□□□□ -1.54
GABRA1-202ENST00000393943 CIRBP-AS1Q8TBR5 109 aa5.45□□□□□ -1.54
GABRA1-202ENST00000393943 UQCR11O14957 56 aa5.45□□□□□ -1.54
GABRA1-202ENST00000393943 FRYQ5TBA9 3013 aa5.44□□□□□ -1.54
GABRA1-202ENST00000393943 RETNLBQ9BQ08 111 aa5.44□□□□□ -1.54
GABRA1-202ENST00000393943 C9orf163Q8N9P6 203 aa5.44□□□□□ -1.54
GABRA1-202ENST00000393943 EPG5Q9HCE0 2579 aa5.43□□□□□ -1.54
GABRA1-202ENST00000393943 VCANP13611 3396 aa5.43□□□□□ -1.54
GABRA1-202ENST00000393943 MDFIQ99750 246 aa5.43□□□□□ -1.54
GABRA1-202ENST00000393943 MMP24-AS1A0A0U1RRL7 71 aa5.42□□□□□ -1.54
GABRA1-202ENST00000393943 LINC00472Q9H8W2 130 aa5.42□□□□□ -1.54
GABRA1-202ENST00000393943 LINC00313P59037 77 aa5.41□□□□□ -1.54
GABRA1-202ENST00000393943 A0A1W2PNN7 141 aa5.41□□□□□ -1.54
GABRA1-202ENST00000393943 KRTAP29-1A8MX34 341 aaPredicted RBP5.41□□□□□ -1.54
GABRA1-202ENST00000393943 RBM12B-AS1Q9P1G2 102 aa5.41□□□□□ -1.54
GABRA1-202ENST00000393943 NBDYA0A0U1RRE5 68 aa5.4□□□□□ -1.54
GABRA1-202ENST00000393943 SSBP3-AS1Q7Z2R9 100 aa5.4□□□□□ -1.54
GABRA1-202ENST00000393943 SZT2Q5T011 3432 aa5.4□□□□□ -1.55
GABRA1-202ENST00000393943 REV3LO60673 3130 aa5.4□□□□□ -1.55
GABRA1-202ENST00000393943 IGLV5-52A0A0A0MRZ9 124 aa5.39□□□□□ -1.55
GABRA1-202ENST00000393943 KRTAP10-11P60412 298 aa5.39□□□□□ -1.55
GABRA1-202ENST00000393943 ACANP16112 2415 aa5.39□□□□□ -1.55
GABRA1-202ENST00000393943 PRUNE2Q8WUY3 3088 aa5.39□□□□□ -1.55
GABRA1-202ENST00000393943 AKAP13Q12802 2813 aa5.39□□□□□ -1.55
GABRA1-202ENST00000393943 A0A0G2JQZ4 141 aa5.39□□□□□ -1.55
GABRA1-202ENST00000393943 CHTF8P0CG12 524 aa5.39□□□□□ -1.55
GABRA1-202ENST00000393943 ASB16-AS1Q495Z4 193 aa5.38□□□□□ -1.55
GABRA1-202ENST00000393943 MIR22HGQ0VDD5 57 aa5.38□□□□□ -1.55
GABRA1-202ENST00000393943 XIRP2A4UGR9 3374 aa5.37□□□□□ -1.55
GABRA1-202ENST00000393943 CASC10Q5T4H9 136 aa5.37□□□□□ -1.55
GABRA1-202ENST00000393943 ZNF861PO60384 105 aa5.37□□□□□ -1.55
GABRA1-202ENST00000393943 WDFY4Q6ZS81 3184 aa5.36□□□□□ -1.55
GABRA1-202ENST00000393943 FRYLO94915 3013 aa5.36□□□□□ -1.55
GABRA1-202ENST00000393943 ZZEF1O43149 2961 aa5.36□□□□□ -1.55
GABRA1-202ENST00000393943 Q6ZR54 194 aa5.35□□□□□ -1.55
GABRA1-202ENST00000393943 FLNAP21333 2647 aaKnown RBP5.35□□□□□ -1.55
GABRA1-202ENST00000393943 IGKV2D-30A0A075B6S6 120 aa5.34□□□□□ -1.55
GABRA1-202ENST00000393943 IGKV2-30P06310 120 aa5.34□□□□□ -1.55
GABRA1-202ENST00000393943 RTL8CO15255 209 aa5.33□□□□□ -1.56
GABRA1-202ENST00000393943 C1orf134Q5TEV5 83 aa5.33□□□□□ -1.56
GABRA1-202ENST00000393943 KRTAP24-1Q3LI83 254 aa5.32□□□□□ -1.56
GABRA1-202ENST00000393943 HRES1P13985 223 aa5.32□□□□□ -1.56
GABRA1-202ENST00000393943 CHD6Q8TD26 2715 aa5.31□□□□□ -1.56
GABRA1-202ENST00000393943 CELSR3Q9NYQ7 3312 aa5.31□□□□□ -1.56
GABRA1-202ENST00000393943 KALRNO60229 2985 aa5.3□□□□□ -1.56
GABRA1-202ENST00000393943 ADGRG4Q8IZF6 3080 aa5.3□□□□□ -1.56
GABRA1-202ENST00000393943 TNRC18O15417 2968 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms